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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LPIN3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
30.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
25.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
24.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
16.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
6.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
3.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LPIN3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
69.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
64.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
46.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
41.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
41.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
40.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
39.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
36.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
36.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
36.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
33.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
32.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
31.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
31.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
29.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
29.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
28.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
28.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
27.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
27.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
25.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
25.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
24.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
24.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
23.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
21.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
20.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
18.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
18.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
15.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
12.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
12.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
12.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
11.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
10.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
10.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
9.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
9.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
9.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
8.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
8.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
8.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
8.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
8.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
8.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
8.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
7.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
7.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
7.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
7.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
7.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
7.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
7.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
7.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
7.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
6.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
6.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
6.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
6.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
6.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
6.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
6.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
6.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
6.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
6.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
6.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
6.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
6.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
6.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
6.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
6.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
6.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
6.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
6.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
6.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
5.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
5.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
5.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
5.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
5.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
5.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
5.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
5.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
5.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
5.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
5.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
5.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
5.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
5.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
5.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
5.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
5.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
5.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
5.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
4.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
4.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
4.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
4.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
4.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
4.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
4.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
4.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
4.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
4.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
4.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
4.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
4.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
4.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
4.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
3.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
3.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
3.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
3.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
3.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
3.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
3.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
3.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
3.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
3.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
3.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
2.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
2.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
2.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
2.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
1.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LPIN3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
71.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
69.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
68.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
64.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
62.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
62.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
61.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
59.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
54.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
53.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
49.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
47.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
44.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
43.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
42.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
42.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
41.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
38.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
34.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
32.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
30.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
30.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
26.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
23.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LPIN3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
65.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
65.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
63.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
59.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
56.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
55.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
49.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
49.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
47.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
44.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
43.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
43.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
41.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
41.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
38.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
35.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
35.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
35.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
35.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
34.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
33.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
33.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
31.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
31.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
31.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
30.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
28.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
27.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
26.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
25.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
24.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
21.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
19.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
19.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
14.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
10.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
9.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
8.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
8.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
7.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
7.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
5.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
5.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
5.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
5.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
4.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
4.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
4.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.1
CPT0025050003
Tumor
1.0
CPT0014450004
Tumor
1.0
CPT0086950003
Tumor
0.9
CPT0012280003
Tumor
0.8
CPT0065430003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0025580004
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0001340003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0086360003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0069160003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0001350001
Normal
0.4
CPT0012370003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0077500001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0026410003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0078530001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0079480003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0081600003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0001260009
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0077110003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0014160003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0069010001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0079300001
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0085670003
Tumor
-0.5
CPT0084590001
Normal
-0.5
CPT0020120003
Tumor
-0.5
CPT0092190003
Normal
-0.6
CPT0009060003
Tumor
-0.6
CPT0088550004
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.