HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.4 nTPM
HPA Brain:18.0 nTPM
GTEx:16.4 nTPM
FANTOM5:14.8 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:2.9 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007007Antibody HPA026111Antibody CAB005889Antibody CAB058692
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells LowNot detectedLowNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.4
2529 Female, age 94, left hemisphere 26.3
1898 Male, age 80, left hemisphere 17.6
2621 Female, age 67, right hemisphere 16.7
1911 Female, age 85, right hemisphere 15.6
1855 Male, age 76, left hemisphere 14.4
2148 Female, age 91, left hemisphere 14.0
Dentate gyrus
nTPM: 18.0
2530 Female, age 94, left hemisphere 27.8
2528 Male, age 74, both hemispheres 19.6
2531 Female, age 67, both hemispheres 19.2
2010 Male, age 76, both hemispheres 18.2
2246 Female, age 85, both hemispheres 12.2
1927 Female, age 91, both hemispheres 10.9
Entorhinal gyrus
nTPM: 14.8
2117 Female, age 91, right hemisphere 19.0
2686 Male, age 75, right hemisphere 17.3
1787 Male, age 76, left hemisphere 15.1
2764 Male, age 80, right hemisphere 13.9
1938 Female, age 85, left hemisphere 12.0
2613 Female, age 94, left hemisphere 11.5
Hippocampus, CA1
nTPM: 13.1
2082 Female, age 91, right hemisphere 15.4
2527 Male, age 74, both hemispheres 14.6
1873 Female, age 85, both hemispheres 12.7
2749 Male, age 80, left hemisphere 12.1
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 15.6
2437 Female, age 94, left hemisphere 19.5
2113 Female, age 91, right hemisphere 17.7
1963 Male, age 80, left hemisphere 16.3
2249 Male, age 74, both hemispheres 16.1
1940 Female, age 85, left hemisphere 12.2
1892 Male, age 76, both hemispheres 11.6
Hippocampus, CA3
nTPM: 16.7
2861 Female, age 67, both hemispheres 24.3
1867 Male, age 76, both hemispheres 17.7
2620 Female, age 94, left hemisphere 16.9
1891 Female, age 85, both hemispheres 14.8
2137 Male, age 80, left hemisphere 14.6
2436 Male, age 74, both hemispheres 12.1
Parahippocampal cortex
nTPM: 13.1
2018 Male, age 76, both hemispheres 18.6
2245 Female, age 91, both hemispheres 16.3
2692 Male, age 74, both hemispheres 13.8
2622 Female, age 67, right hemisphere 13.5
1990 Female, age 91, right hemisphere 13.2
2532 Female, age 72, left hemisphere 12.4
1850 Male, age 80, both hemispheres 11.8
2250 Female, age 67, right hemisphere 11.6
1933 Female, age 85, both hemispheres 11.2
2693 Female, age 94, both hemispheres 8.8
Perirhinal gyrus
nTPM: 10.5
1841 Female, age 85, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.8
2848 Male, age 76, right hemisphere 10.8
1794 Male, age 80, right hemisphere 10.2
2521 Female, age 94, right hemisphere 9.9
Subiculum
nTPM: 16.2
2042 Male, age 76, both hemispheres 23.2
1901 Male, age 80, both hemispheres 17.0
2438 Female, age 94, left hemisphere 15.1
2619 Male, age 74, both hemispheres 14.4
2729 Female, age 91, right hemisphere 13.7
1977 Female, age 85, both hemispheres 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 98.1
Min nTPM: 4.6
Std nTPM: 10.0
Median nTPM: 14.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 98.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 65.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 63.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 51.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 43.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 38.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 30.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 30.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 29.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 28.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.8
FF:10153-102I9 76 years, female 18.3
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 4.4
Pig sample Sample description nTPM
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 6.0
Min nTPM: 2.6
Sample A Female 4.3
Sample B Female 2.6
Sample C Male 4.2
Sample D Male 6.0
Dorsal hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.4
Sample A Female 4.5
Sample B Female 3.6
Sample C Male 3.5
Sample D Male 3.4
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 6.7
Min nTPM: 2.8
Sample A Female 6.7
Sample B Female 4.1
Sample C Male 4.2
Sample D Male 2.8
Ventral hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 5.3
Min nTPM: 2.9
Sample A Female 4.1
Sample B Female 2.9
Sample C Male 5.3
Sample D Male 3.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.3
Sample A Male 3.6
Sample B Male 2.7
Sample C Female 2.3
Sample D Female 2.6
Hippocampal formation
nTPM: 3.0
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.4
Sample A Male 2.4
Sample B Male 3.2
Sample C Female 3.0
Sample D Female 3.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
1387 Antisense, RP_Baylor_102924, Mouse strain C57BL/6J (56 days, male) 6.1
100146145 Antisense, RP_110421_02_E04, Mouse strain C57BL/6J (56 days, male) 2.2

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