We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DAP3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
301.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
247.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
218.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
212.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
209.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
192.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
187.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
185.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
177.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
175.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
174.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
174.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
174.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
174.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
169.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
169.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
168.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
167.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
162.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
161.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
160.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
159.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
158.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
150.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
147.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
145.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
144.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
144.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
141.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
138.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
137.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
137.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
137.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
136.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
135.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
133.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
132.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
131.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
131.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
131.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
129.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
128.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
128.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
127.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
125.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
125.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
125.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
125.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
125.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
125.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
124.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
124.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
123.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
123.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
121.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
121.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
121.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
121.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
121.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
121.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
121.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
120.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
119.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
118.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
118.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
118.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
118.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
117.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
117.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
117.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
116.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
116.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
116.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
115.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
115.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
114.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
113.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
113.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
113.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
112.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
112.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
111.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
111.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
111.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
111.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
110.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
110.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
110.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
110.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
109.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
108.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
108.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
108.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
108.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
108.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
107.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
107.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
106.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
106.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
106.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
105.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
105.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
105.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
105.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
105.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
105.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
105.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
104.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
104.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
103.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
103.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
103.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
103.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
103.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
103.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
102.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
102.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
101.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
101.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
101.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
101.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
101.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
101.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
101.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
100.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
100.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
100.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
99.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
99.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
99.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
98.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
97.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
96.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
96.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
96.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
96.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
96.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
96.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
95.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
95.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
95.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
94.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
94.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
94.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
94.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
93.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
93.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
93.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
93.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
93.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
92.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
92.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
92.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
92.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
92.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
91.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
90.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
90.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
90.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
90.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
90.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
89.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
89.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
89.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
89.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
88.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
88.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
88.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
87.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
87.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
86.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
86.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
86.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
86.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
86.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
86.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
86.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
86.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
85.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
85.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
84.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
84.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
84.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
84.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
84.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
84.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
83.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
82.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
82.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
82.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
82.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
81.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
81.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
80.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
80.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
80.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
79.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
79.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
79.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
78.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
78.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
78.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
78.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
78.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
78.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
77.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
77.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
77.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
77.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
77.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
76.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
76.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
76.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
76.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
76.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
75.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
75.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
75.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
75.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
75.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
75.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
74.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
74.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
74.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
74.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
74.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
74.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
74.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
74.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
74.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
73.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
73.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
73.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
72.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
72.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
72.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
72.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
72.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
72.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
72.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
71.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
71.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
71.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
71.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
70.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
70.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
70.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
70.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
69.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
69.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
69.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
69.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
68.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
68.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
67.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
67.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
67.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
67.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
66.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
66.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
66.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
65.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
65.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
65.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
65.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
65.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
64.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
64.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
63.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
63.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
63.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
62.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
61.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
61.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
61.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
61.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
61.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
61.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
61.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
61.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
60.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
60.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
60.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
60.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
60.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
60.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
60.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
60.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
60.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
59.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
59.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
58.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
58.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
58.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
58.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
58.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
57.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
57.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
56.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
56.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
55.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
55.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
55.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
55.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
55.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
55.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
54.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
54.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
54.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
54.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
53.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
53.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
53.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
52.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
52.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
52.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
52.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
51.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
51.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
51.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
50.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
50.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
50.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
49.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
49.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
49.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
49.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
48.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
48.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
47.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
47.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
47.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
46.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
46.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
45.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
44.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
44.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
43.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
43.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
43.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
43.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
43.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
43.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
42.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
42.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
42.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
42.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
41.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
41.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
40.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
39.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
39.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
39.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
38.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
38.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
37.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
36.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
35.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
34.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
34.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
32.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DAP3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.1
Number of samples
231
Samples
Sample
Description
TPM
DO50829
0 years, male, NA, stage:3, alive, 570 days
225.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
154.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
136.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
132.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
132.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
131.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
129.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
124.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
123.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
121.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
120.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
118.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
115.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
111.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
110.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
110.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
110.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
110.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
109.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
108.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
103.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
102.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
101.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
101.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
99.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
99.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
99.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
98.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
97.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
95.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
93.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
93.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
91.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
91.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
90.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
90.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
89.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
87.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
86.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
85.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
85.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
85.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
84.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
83.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
83.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
83.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
83.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
83.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
83.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
82.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
82.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
80.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
80.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
80.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
80.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
79.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
78.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
78.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
78.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
77.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
77.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
77.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
77.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
77.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
77.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
77.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
77.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
76.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
76.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
76.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
75.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
75.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
75.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
75.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
75.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
74.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
74.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
73.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
73.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
73.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
73.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
73.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
73.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
72.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
72.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
72.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
72.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
71.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
71.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
70.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
70.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
70.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
70.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
70.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
69.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
69.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
69.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
68.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
68.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
67.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
67.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
67.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
67.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
67.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
66.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
65.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
65.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
64.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
64.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
63.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
63.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
62.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
62.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
62.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
62.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
62.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
61.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
61.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
61.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
61.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
61.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
60.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
60.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
60.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
58.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
57.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
57.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
57.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
56.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
55.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
55.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
54.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
54.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
54.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
54.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
53.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
53.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
53.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
52.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
52.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
52.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
52.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
51.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
51.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
51.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
51.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
50.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
50.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
50.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
50.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
50.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
49.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
49.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
49.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
49.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
48.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
48.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
48.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
48.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
48.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
48.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
47.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
47.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
47.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
47.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
47.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
47.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
47.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
47.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
47.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
46.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
46.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
45.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
43.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
43.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
43.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
42.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
42.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
42.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
42.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
42.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
42.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
41.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
41.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
41.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
41.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
40.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
40.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
40.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
40.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
39.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
39.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
39.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
38.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
38.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
38.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
38.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
37.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
36.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
36.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
36.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
36.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
36.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
36.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
35.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
35.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
33.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
33.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
33.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
32.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
31.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
31.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
31.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
30.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
30.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
30.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
30.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
28.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
27.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
27.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
26.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
26.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
26.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
26.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
25.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
24.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
24.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
24.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
24.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
21.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
435
Tumor
1.4
525
Tumor
1.2
411
Tumor
1.1
231
Tumor
1.1
865
Tumor
1.0
957
Tumor
0.9
1041
Tumor
0.9
227
Tumor
0.9
533
Tumor
0.9
537
Tumor
0.9
473
Tumor
0.9
571
Tumor
0.8
745
Tumor
0.8
477
Tumor
0.8
967
Tumor
0.8
965
Tumor
0.7
123
Tumor
0.7
741
Tumor
0.7
361
Tumor
0.7
557
Tumor
0.7
427
Tumor
0.7
171
Tumor
0.6
567
Tumor
0.6
685
Tumor
0.6
423
Tumor
0.6
713
Tumor
0.6
883
Tumor
0.6
357
Tumor
0.6
1025
Tumor
0.6
483
Tumor
0.5
1013
Tumor
0.5
953
Tumor
0.5
861
Tumor
0.5
363
Tumor
0.5
127
Tumor
0.5
393
Tumor
0.5
367
Tumor
0.5
387
Tumor
0.5
951
Tumor
0.5
665
Tumor
0.5
147
Tumor
0.4
823
Tumor
0.4
267
Tumor
0.4
573
Tumor
0.4
351
Tumor
0.4
867
Tumor
0.4
743
Tumor
0.4
1021
Tumor
0.4
257
Tumor
0.4
915
Tumor
0.4
663
Tumor
0.4
145
Tumor
0.4
355
Tumor
0.4
553
Tumor
0.4
465
Tumor
0.3
715
Tumor
0.3
497
Tumor
0.3
977
Tumor
0.3
981
Tumor
0.3
221
Tumor
0.3
635
Tumor
0.3
851
Tumor
0.3
695
Tumor
0.3
353
Tumor
0.3
395
Tumor
0.3
327
Tumor
0.3
431
Tumor
0.3
983
Tumor
0.2
271
Tumor
0.2
1031
Tumor
0.2
671
Tumor
0.2
223
Tumor
0.2
877
Tumor
0.2
491
Tumor
0.2
724
Normal
0.2
913
Tumor
0.2
195
Tumor
0.2
161
Tumor
0.2
641
Tumor
0.2
365
Tumor
0.2
937
Tumor
0.2
213
Tumor
0.1
451
Tumor
0.1
187
Tumor
0.1
433
Tumor
0.1
277
Tumor
0.1
191
Tumor
0.1
517
Tumor
0.1
721
Tumor
0.1
755
Tumor
0.1
331
Tumor
0.1
112
Tumor
0.1
313
Tumor
0.1
391
Tumor
0.1
131
Tumor
0.1
463
Tumor
0.0
375
Tumor
0.0
493
Tumor
0.0
661
Tumor
0.0
356
Normal
0.0
647
Tumor
0.0
467
Tumor
0.0
697
Tumor
0.0
132
Normal
0.0
487
Tumor
0.0
727
Tumor
0.0
881
Tumor
0.0
471
Tumor
N/A
914
Normal
N/A
911
Tumor
0.0
912
Normal
0.0
923
Tumor
0.0
272
Normal
0.0
527
Tumor
0.0
258
Normal
0.0
413
Tumor
0.0
858
Normal
0.0
385
Tumor
0.0
815
Tumor
0.0
232
Normal
0.0
128
Normal
0.0
135
Tumor
0.0
777
Tumor
-0.1
615
Tumor
-0.1
185
Tumor
-0.1
963
Tumor
-0.1
114
Normal
-0.1
297
Tumor
-0.1
481
Tumor
-0.1
436
Normal
-0.1
358
Normal
-0.1
148
Normal
-0.1
514
Normal
-0.1
528
Normal
-0.1
482
Normal
-0.1
136
Normal
-0.1
857
Tumor
-0.1
523
Tumor
-0.1
868
Normal
-0.1
728
Normal
-0.1
1043
Tumor
-0.1
616
Normal
-0.1
1014
Normal
-0.1
261
Tumor
-0.1
285
Tumor
-0.1
564
Normal
-0.1
113
Tumor
-0.1
535
Tumor
-0.1
474
Normal
-0.1
926
Normal
-0.1
425
Tumor
-0.1
738
Normal
-0.1
1016
Normal
-0.1
526
Normal
-0.1
925
Tumor
-0.1
817
Tumor
-0.1
137
Tumor
-0.1
1032
Normal
-0.1
364
Normal
-0.1
534
Normal
-0.1
211
Tumor
-0.2
162
Normal
-0.2
284
Normal
-0.2
696
Normal
-0.2
742
Normal
-0.2
383
Tumor
-0.2
462
Normal
-0.2
188
Normal
-0.2
978
Normal
-0.2
428
Normal
-0.2
756
Normal
-0.2
141
Tumor
-0.2
466
Normal
-0.2
944
Normal
-0.2
546
Normal
-0.2
125
Tumor
-0.2
432
Normal
-0.2
628
Normal
-0.2
126
Normal
-0.2
416
Normal
-0.2
328
Normal
-0.2
642
Normal
-0.2
196
Normal
-0.2
785
Tumor
-0.2
464
Normal
-0.2
878
Normal
-0.2
824
Normal
-0.2
982
Normal
-0.2
172
Normal
-0.2
516
Normal
-0.2
388
Normal
-0.2
778
Normal
-0.2
722
Normal
-0.2
572
Normal
-0.2
1026
Normal
-0.2
278
Normal
-0.2
554
Normal
-0.2
212
Normal
-0.2
111
Normal
-0.2
472
Normal
-0.2
228
Normal
-0.2
513
Tumor
-0.2
723
Tumor
-0.2
864
Normal
-0.3
1015
Tumor
-0.3
341
Tumor
-0.3
447
Tumor
-0.3
312
Normal
-0.3
446
Normal
-0.3
222
Normal
-0.3
1022
Normal
-0.3
424
Normal
-0.3
1042
Normal
-0.3
366
Normal
-0.3
866
Normal
-0.3
952
Normal
-0.3
786
Normal
-0.3
862
Normal
-0.3
618
Normal
-0.3
884
Normal
-0.3
882
Normal
-0.3
426
Normal
-0.3
975
Tumor
-0.3
214
Normal
-0.3
714
Normal
-0.3
396
Normal
-0.3
648
Normal
-0.3
873
Tumor
-0.3
816
Normal
-0.3
746
Normal
-0.3
268
Normal
-0.3
617
Tumor
-0.3
484
Normal
-0.3
311
Tumor
-0.3
224
Normal
-0.3
958
Normal
-0.3
964
Normal
-0.3
954
Normal
-0.3
124
Normal
-0.3
376
Normal
-0.3
298
Normal
-0.3
666
Normal
-0.3
412
Normal
-0.3
518
Normal
-0.3
1028
Normal
-0.3
852
Normal
-0.3
818
Normal
-0.3
956
Normal
-0.3
146
Normal
-0.3
362
Normal
-0.3
461
Tumor
-0.3
456
Normal
-0.3
452
Normal
-0.4
434
Normal
-0.4
186
Normal
-0.4
262
Normal
-0.4
664
Normal
-0.4
922
Normal
-0.4
392
Normal
-0.4
716
Normal
-0.4
368
Normal
-0.4
142
Normal
-0.4
422
Normal
-0.4
636
Normal
-0.4
662
Normal
-0.4
488
Normal
-0.4
138
Normal
-0.4
394
Normal
-0.4
386
Normal
-0.4
478
Normal
-0.4
984
Normal
-0.4
568
Normal
-0.4
314
Normal
-0.4
414
Normal
-0.4
352
Normal
-0.4
686
Normal
-0.4
342
Normal
-0.4
737
Tumor
-0.4
916
Normal
-0.4
448
Normal
-0.4
468
Normal
-0.4
283
Tumor
-0.4
955
Tumor
-0.4
445
Tumor
-0.4
574
Normal
-0.4
976
Normal
-0.4
444
Normal
-0.4
938
Normal
-0.4
924
Normal
-0.4
698
Normal
-0.4
627
Tumor
-0.5
538
Normal
-0.5
918
Normal
-0.5
814
Normal
-0.5
1046
Normal
-0.5
286
Normal
-0.5
558
Normal
-0.5
874
Normal
-0.5
354
Normal
-0.5
384
Normal
-0.5
443
Tumor
-0.5
217
Tumor
-0.5
966
Normal
-0.5
344
Normal
-0.5
415
Tumor
-0.5
421
Tumor
-0.5
494
Normal
-0.5
524
Normal
-0.5
343
Tumor
-0.5
968
Normal
-0.5
813
Tumor
-0.5
545
Tumor
-0.5
455
Tumor
-0.5
498
Normal
-0.6
515
Tumor
-0.6
943
Tumor
-0.6
917
Tumor
-0.6
1044
Normal
-0.6
563
Tumor
-0.6
332
Normal
-0.6
1027
Tumor
-0.6
1045
Tumor
-0.6
192
Normal
-0.6
218
Normal
-0.6
744
Normal
-0.7
492
Normal
-0.7
672
Normal
-0.7
536
Normal
-0.7
863
Tumor
-0.9
921
Tumor
-1.3
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
