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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
463.6
nTPM
GTEx:
463.6
nTPM
FANTOM5:
183.0
Scaled Tags Per Million
Pig:
544.2
nTPM
Mouse:
1484.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
463.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 463.6
Samples: 105
Max nTPM: 1073.8
Min nTPM: 281.7
Std nTPM: 110.2
Median nTPM:
2_1
77 years, female
1073.8
307_1
66 years, female
880.5
495_1
57 years, female
797.3
139_1
64 years, female
652.2
322_1
76 years, male
600.7
145_1
84 years, male
598.4
89_1
63 years, male
597.3
501_1
88 years, male
591.9
311_1
78 years, male
580.5
6_1
73 years, female
579.1
119_1
70 years, female
577.6
348_1
84 years, male
576.3
413_1
59 years, female
575.9
447_1
81 years, male
571.5
491_1
89 years, female
565.6
117_1
61 years, male
562.3
293_1
68 years, female
561.3
81_1
67 years, male
552.5
17_1
71 years, male
548.1
120_1
70 years, female
532.4
43_1
64 years, female
528.1
324_1
76 years, male
526.7
126_1
63 years, male
526.4
308_1
70 years, female
524.6
321_1
62 years, female
523.2
490_1
67 years, female
512.9
149_1
88 years, male
510.1
4_1
88 years, female
502.8
316_1
62 years, male
500.0
415_1
77 years, female
496.5
162_1
79 years, female
494.7
350_1
84 years, female
493.9
35_1
74 years, female
483.7
18_1
88 years, male
483.4
466_1
57 years, female
483.4
313_1
79 years, female
483.0
518_1
75 years, female
481.5
142_1
61 years, female
480.7
526_1
61 years, male
479.6
115_1
83 years, male
474.7
41_1
94 years, female
474.3
377_1
82 years, female
469.1
153_1
70 years, female
464.2
414_1
84 years, female
454.0
386_1
76 years, male
450.9
109_1
81 years, female
449.8
396_1
62 years, male
447.0
317_1
60 years, male
446.6
353_1
82 years, female
444.8
292_1
71 years, male
442.6
506_1
65 years, male
441.5
315_1
62 years, female
439.2
384_1
83 years, male
434.6
319_1
81 years, male
433.2
468_1
89 years, male
432.9
173_1
67 years, male
432.5
499_1
55 years, female
428.2
9_1
66 years, female
428.0
405_1
91 years, male
426.9
291_1
76 years, male
426.4
254_1
77 years, female
423.9
335_1
73 years, female
423.0
404_1
82 years, female
421.8
32_1
67 years, male
420.2
172_1
72 years, female
419.3
320_1
89 years, female
418.9
266_1
85 years, male
417.6
243_1
75 years, male
416.2
288_1
66 years, female
416.2
314_1
67 years, male
415.5
352_1
62 years, male
413.4
376_1
75 years, female
411.5
406_1
79 years, male
411.2
375_1
74 years, female
410.4
425_1
59 years, female
408.3
480_1
63 years, male
404.2
286_1
68 years, female
403.7
318_1
68 years, male
397.8
217_1
76 years, male
397.1
229_1
69 years, female
395.1
452_1
88 years, female
392.3
237_1
82 years, male
391.2
503_1
68 years, male
387.6
251_1
78 years, male
387.3
177_1
74 years, male
384.4
265_1
87 years, male
382.8
517_1
88 years, male
382.4
295_1
61 years, female
382.0
42_1
85 years, male
377.2
189_1
76 years, male
376.4
351_1
91 years, male
374.6
218_1
71 years, female
371.1
347_1
72 years, male
369.7
137_1
83 years, male
368.2
264_1
73 years, female
364.7
354_1
81 years, female
350.9
356_1
87 years, female
348.3
163_1
78 years, male
347.2
379_1
60 years, male
340.9
99_1
64 years, male
338.7
246_1
77 years, male
333.2
389_1
86 years, female
329.6
349_1
83 years, male
327.4
355_1
70 years, female
312.9
394_1
75 years, female
281.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.