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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TERF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
46.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
41.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
38.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
37.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
35.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
34.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
33.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
29.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
28.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
27.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
15.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
11.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TERF2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
32.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
28.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
27.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
25.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
25.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
24.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
24.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
22.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
21.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
21.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
21.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
21.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
20.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
20.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
20.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
19.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
19.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
18.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
17.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
17.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
16.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
16.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
16.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
16.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
15.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TERF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
25.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
23.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
20.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
19.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
16.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TERF2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
183.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
83.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
77.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
71.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
70.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
68.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
66.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
62.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
61.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
60.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
60.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
55.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
54.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
53.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
47.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
44.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
42.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
42.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
41.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
40.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
39.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
38.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
38.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
37.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
36.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
35.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
32.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
30.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
30.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
30.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
29.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
28.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
27.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
27.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
27.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
27.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
26.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
24.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
24.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
23.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
22.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
19.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.8
CPT0001180009
Tumor
0.6
CPT0017410003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0069160003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0081990003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0085670003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0001540009
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0009060003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0023690003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0065870003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0001510001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0069000003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0092800003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0026420001
Normal
-0.3
CPT0000640003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0079180003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
