HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.4 nTPM
HPA Brain:32.5 nTPM
GTEx:16.4 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:34.2 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033879
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 32.5
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
2529 Female, age 94, left hemisphere 35.9
1898 Male, age 80, left hemisphere 32.9
1911 Female, age 85, right hemisphere 30.1
2148 Female, age 91, left hemisphere 26.4
2621 Female, age 67, right hemisphere 23.1
1855 Male, age 76, left hemisphere 20.4
Dentate gyrus
nTPM: 32.5
2246 Female, age 85, both hemispheres 44.2
2528 Male, age 74, both hemispheres 43.2
2531 Female, age 67, both hemispheres 32.3
2010 Male, age 76, both hemispheres 29.1
2530 Female, age 94, left hemisphere 28.7
1927 Female, age 91, both hemispheres 17.3
Entorhinal gyrus
nTPM: 23.1
2117 Female, age 91, right hemisphere 31.9
2764 Male, age 80, right hemisphere 25.4
2686 Male, age 75, right hemisphere 24.2
1938 Female, age 85, left hemisphere 20.0
1787 Male, age 76, left hemisphere 19.4
2613 Female, age 94, left hemisphere 17.7
Hippocampus, CA1
nTPM: 24.4
2082 Female, age 91, right hemisphere 41.3
1873 Female, age 85, both hemispheres 29.5
2527 Male, age 74, both hemispheres 21.6
2045 Male, age 76, both hemispheres 19.2
2749 Male, age 80, left hemisphere 10.6
Hippocampus, CA2
nTPM: 26.8
2249 Male, age 74, both hemispheres 39.1
1940 Female, age 85, left hemisphere 33.3
2113 Female, age 91, right hemisphere 27.3
2437 Female, age 94, left hemisphere 25.6
1963 Male, age 80, left hemisphere 21.8
1892 Male, age 76, both hemispheres 13.9
Hippocampus, CA3
nTPM: 24.5
1891 Female, age 85, both hemispheres 33.2
2620 Female, age 94, left hemisphere 31.0
2436 Male, age 74, both hemispheres 27.9
2861 Female, age 67, both hemispheres 21.8
2137 Male, age 80, left hemisphere 16.9
1867 Male, age 76, both hemispheres 16.4
Parahippocampal cortex
nTPM: 23.4
2693 Female, age 94, both hemispheres 34.9
1933 Female, age 85, both hemispheres 26.9
1990 Female, age 91, right hemisphere 24.6
2250 Female, age 67, right hemisphere 23.8
2692 Male, age 74, both hemispheres 23.1
2245 Female, age 91, both hemispheres 22.3
2532 Female, age 72, left hemisphere 21.6
1850 Male, age 80, both hemispheres 19.9
2018 Male, age 76, both hemispheres 19.1
2622 Female, age 67, right hemisphere 17.5
Perirhinal gyrus
nTPM: 20.3
1794 Male, age 80, right hemisphere 24.2
1847 Female, age 91, left hemisphere 20.3
2521 Female, age 94, right hemisphere 19.8
2848 Male, age 76, right hemisphere 19.5
1841 Female, age 85, right hemisphere 17.8
Subiculum
nTPM: 28.9
1977 Female, age 85, both hemispheres 35.0
2042 Male, age 76, both hemispheres 32.0
2729 Female, age 91, right hemisphere 31.2
1901 Male, age 80, both hemispheres 29.7
2619 Male, age 74, both hemispheres 25.9
2438 Female, age 94, left hemisphere 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 61.5
Min nTPM: 4.2
Std nTPM: 8.4
Median nTPM: 14.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 61.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 52.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 52.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 45.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 38.2
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 37.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 35.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 32.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 32.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 31.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 31.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.7
FF:10153-102I9 76 years, female 35.6
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.5
Pig sample Sample description nTPM
Subiculum
nTPM: 14.6
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.9
Sample A Female 15.5
Sample B Female 11.9
Sample C Male 18.4
Sample D Male 12.6
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 9.2
Sample A Female 14.4
Sample B Female 12.9
Sample C Male 11.9
Sample D Male 9.2
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.2
Sample A Female 16.9
Sample B Female 15.0
Sample C Male 11.9
Sample D Male 11.2
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 11.8
Sample A Female 21.6
Sample B Female 11.8
Sample C Male 23.6
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 34.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.4
Sample A Male 15.2
Sample B Male 12.4
Sample C Female 20.0
Sample D Female 19.3
Hippocampal formation
nTPM: 34.2
Samples: 4

Max nTPM: 42.4
Min nTPM: 27.0
Sample A Male 27.0
Sample B Male 37.4
Sample C Female 42.4
Sample D Female 30.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
73817421 Antisense, RP_050921_01_C07, Mouse strain C57BL/6J (56 days, male) 3.5
71723985 Antisense, RP_050921_01_C07, Mouse strain C57BL/6J (56 days, male) 2.7

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