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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
48.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
48.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
39.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
33.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
25.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
19.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
12.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
4.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
3.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB4 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
249.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
213.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
153.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
143.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
135.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
132.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
127.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
117.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
115.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
105.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
99.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
97.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
97.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
95.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
93.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
89.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
83.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
82.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
81.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
74.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
74.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
74.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
73.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
73.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
73.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
67.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
65.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
65.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
64.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
61.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
57.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
57.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
56.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
55.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
51.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
51.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
51.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
50.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
49.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
49.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
48.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
46.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
46.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
46.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
46.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
45.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
45.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
44.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
44.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
43.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
43.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
43.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
42.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
42.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
42.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
42.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
42.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
41.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
41.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
41.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
40.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
40.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
39.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
38.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
37.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
37.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
36.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
36.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
36.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
35.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
34.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
34.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
34.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
33.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
33.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
33.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
33.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
32.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
32.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
32.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
30.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
30.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
30.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
29.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
28.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
28.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
28.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
28.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
28.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
27.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
26.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
25.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
24.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
24.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
24.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
24.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
23.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
23.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
19.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
19.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
19.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
18.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
16.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
16.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
15.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
11.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
11.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
9.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
9.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
8.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
8.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
7.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
7.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
7.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
7.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
7.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
7.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
7.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
6.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
6.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
6.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
6.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
6.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
6.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
6.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
6.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
5.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
5.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
5.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
5.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
5.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
5.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
5.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
5.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
5.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
5.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
4.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
4.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
4.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
4.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
4.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
4.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
3.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
3.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
3.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
3.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
2.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
2.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
2.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
142.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
101.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
75.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
66.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
53.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
48.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
47.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
44.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
35.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
31.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
29.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
24.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
24.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
11.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
10.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
8.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
8.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
8.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
7.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
7.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
7.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
7.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
6.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
6.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
5.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
5.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
5.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
4.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
4.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
3.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
3.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
3.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
3.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
3.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
3.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
78.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1181.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
478.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
411.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
330.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
322.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
316.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
305.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
304.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
293.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
278.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
274.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
250.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
247.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
234.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
232.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
215.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
214.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
203.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
194.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
192.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
191.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
185.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
183.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
182.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
182.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
177.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
175.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
175.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
169.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
165.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
163.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
155.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
145.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
140.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
140.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
138.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
135.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
132.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
132.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
131.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
127.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
127.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
127.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
127.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
127.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
126.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
121.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
120.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
119.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
118.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
117.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
117.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
116.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
115.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
114.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
114.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
112.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
112.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
106.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
105.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
103.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
103.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
102.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
102.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
101.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
101.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
100.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
99.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
99.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
98.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
97.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
97.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
96.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
95.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
95.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
94.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
93.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
93.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
93.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
91.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
91.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
90.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
89.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
89.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
88.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
88.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
87.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
86.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
85.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
84.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
84.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
83.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
82.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
81.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
80.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
80.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
79.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
79.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
78.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
78.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
78.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
77.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
77.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
75.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
73.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
72.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
72.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
72.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
71.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
71.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
69.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
68.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
68.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
68.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
66.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
65.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
65.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
65.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
65.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
64.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
63.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
63.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
62.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
62.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
62.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
61.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
61.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
60.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
60.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
60.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
59.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
58.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
57.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
57.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
57.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
57.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
56.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
55.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
54.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
54.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
54.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
52.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
52.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
52.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
51.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
50.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
50.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
49.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
49.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
48.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
48.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
47.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
47.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
46.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
45.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
45.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
44.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
43.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
43.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
42.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
42.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
41.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
41.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
40.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
39.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
38.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
38.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
36.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
36.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
36.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
36.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
35.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
34.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
34.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
33.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
32.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
31.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
30.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
30.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
29.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
29.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
29.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
25.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
25.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
5.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
5.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
2.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
1.6
CPT0086950003
Tumor
1.2
CPT0025050003
Tumor
1.1
CPT0012180003
Tumor
1.1
CPT0024670003
Tumor
1.0
CPT0088900003
Tumor
1.0
CPT0069160003
Tumor
1.0
CPT0065430003
Tumor
0.9
CPT0015810003
Tumor
0.9
CPT0092290003
Tumor
0.9
CPT0014450004
Tumor
0.9
CPT0087040003
Tumor
0.9
CPT0089020003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0086360003
Tumor
0.8
CPT0079410003
Tumor
0.7
CPT0007320003
Tumor
0.7
CPT0009060003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0088480003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0066480003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0075720003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0012670003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0077310003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0064370003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0000870016
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0088780001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0075170001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0012920003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0001220008
Tumor
-0.3
CPT0012090003
Normal
-0.3
CPT0007860003
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0078940001
Normal
-0.3
CPT0092310003
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0002350011
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0017450001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0006730001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0001550001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0077110003
Tumor
-0.5
CPT0065450001
Normal
-0.5
CPT0078800003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0076350001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0019160001
Normal
-0.6
CPT0088970003
Tumor
-0.7
CPT0064400001
Normal
-0.7
CPT0079270003
Tumor
-0.7
CPT0075570001
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0066430001
Normal
-0.7
CPT0023350003
Tumor
-0.8
CPT0088550004
Tumor
-1.0
CPT0002270011
Tumor
-1.3
CPT0001340003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.