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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
279.1
nTPM
GTEx:
279.1
nTPM
FANTOM5:
115.9
Scaled Tags Per Million
Pig:
117.7
nTPM
Mouse:
893.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
279.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 279.1
Samples: 105
Max nTPM: 760.5
Min nTPM: 49.9
Std nTPM: 164.5
Median nTPM:
354_1
81 years, female
760.5
352_1
62 years, male
750.6
218_1
71 years, female
737.9
356_1
87 years, female
659.7
163_1
78 years, male
612.1
350_1
84 years, female
580.8
172_1
72 years, female
577.1
349_1
83 years, male
571.7
243_1
75 years, male
554.8
353_1
82 years, female
538.0
319_1
81 years, male
537.0
386_1
76 years, male
522.7
355_1
70 years, female
494.5
377_1
82 years, female
482.5
177_1
74 years, male
475.6
351_1
91 years, male
468.7
376_1
75 years, female
434.1
394_1
75 years, female
420.0
335_1
73 years, female
395.9
503_1
68 years, male
391.2
447_1
81 years, male
388.1
321_1
62 years, female
387.3
6_1
73 years, female
383.6
292_1
71 years, male
382.4
293_1
68 years, female
381.6
237_1
82 years, male
378.0
425_1
59 years, female
376.5
318_1
68 years, male
370.7
379_1
60 years, male
354.1
317_1
60 years, male
346.2
320_1
89 years, female
344.2
286_1
68 years, female
342.9
375_1
74 years, female
341.2
173_1
67 years, male
336.2
452_1
88 years, female
335.0
389_1
86 years, female
315.2
384_1
83 years, male
310.3
347_1
72 years, male
310.0
99_1
64 years, male
307.5
295_1
61 years, female
301.3
316_1
62 years, male
300.3
406_1
79 years, male
297.4
229_1
69 years, female
295.4
506_1
65 years, male
290.9
189_1
76 years, male
287.6
251_1
78 years, male
281.1
246_1
77 years, male
269.8
322_1
76 years, male
263.4
526_1
61 years, male
261.8
480_1
63 years, male
261.4
115_1
83 years, male
259.9
405_1
91 years, male
259.7
291_1
76 years, male
258.5
517_1
88 years, male
258.3
266_1
85 years, male
250.0
265_1
87 years, male
244.2
264_1
73 years, female
241.5
404_1
82 years, female
237.7
9_1
66 years, female
233.1
468_1
89 years, male
228.3
348_1
84 years, male
216.7
396_1
62 years, male
203.6
254_1
77 years, female
198.2
217_1
76 years, male
192.4
324_1
76 years, male
188.2
153_1
70 years, female
188.0
311_1
78 years, male
187.1
35_1
74 years, female
185.2
2_1
77 years, female
178.9
137_1
83 years, male
176.9
4_1
88 years, female
176.6
518_1
75 years, female
173.7
145_1
84 years, male
167.2
126_1
63 years, male
164.1
120_1
70 years, female
161.2
17_1
71 years, male
156.7
18_1
88 years, male
155.6
109_1
81 years, female
149.2
315_1
62 years, female
146.1
415_1
77 years, female
145.5
499_1
55 years, female
137.0
288_1
66 years, female
136.3
307_1
66 years, female
136.3
313_1
79 years, female
134.9
414_1
84 years, female
134.4
142_1
61 years, female
128.7
117_1
61 years, male
125.9
42_1
85 years, male
124.4
162_1
79 years, female
121.4
314_1
67 years, male
118.7
81_1
67 years, male
117.5
41_1
94 years, female
116.0
308_1
70 years, female
100.6
32_1
67 years, male
98.0
43_1
64 years, female
97.8
466_1
57 years, female
92.1
119_1
70 years, female
92.0
139_1
64 years, female
88.0
89_1
63 years, male
79.1
413_1
59 years, female
73.9
495_1
57 years, female
68.2
490_1
67 years, female
67.1
501_1
88 years, male
59.7
149_1
88 years, male
54.8
491_1
89 years, female
49.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.