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  • LGALS3
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:272.7 nTPM
HPA:255.7 nTPM
GTEx:272.7 nTPM
FANTOM5:518.2 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003162Antibody CAB005191
Follicle cells Not detected-
Ovarian stroma cells LowHigh





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.7
overview
Female, age 64
Ovary sample 192
nTPM: 245.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 273.2
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 186.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 212.8
N/A
Female, age 16
Ovary sample 3663
nTPM: 431.2
N/A
Female, age 20
Ovary sample 3664
nTPM: 219.5
N/A
Female, age 32
Ovary sample 3665
nTPM: 221.2

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 272.7
Samples: 193

Max nTPM: 573.9
Min nTPM: 125.7
Std nTPM: 74.2
Median nTPM: 265.0
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 573.9
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 563.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 512.5
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 487.6
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 485.8
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 435.1
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 409.9
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 408.9
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 408.3
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 405.1
GTEX-RU72-2226-SM-46MUE 50-59 years, female 404.3
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 404.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 393.3
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 385.5
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 382.9
GTEX-S341-0726-SM-4AD5R 40-49 years, female 366.1
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 365.1
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 360.6
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 355.4
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 355.3
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 355.1
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 353.7
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 351.1
GTEX-183WM-1926-SM-72D5F 70-79 years, female 348.8
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 346.6
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 343.3
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 339.7
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 338.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 338.1
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 337.3
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 337.1
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 336.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 335.9
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 330.4
GTEX-QCQG-1426-SM-48U22 50-59 years, female 328.2
GTEX-R45C-2526-SM-GRR28 60-69 years, female 326.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 324.8
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 324.8
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 322.9
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 322.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 322.5
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 322.5
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 321.6
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 320.6
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 320.2
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 315.6
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 314.2
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 313.8
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 313.4
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 312.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 308.6
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 305.7
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 304.3
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 303.3
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 302.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 301.3
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 301.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 300.9
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 300.2
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 299.7
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 299.4
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 299.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 297.7
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 296.1
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 296.0
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 295.2
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 294.9
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 293.0
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 291.8
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 291.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 289.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 288.9
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 288.5
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 285.0
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 282.3
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 281.2
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 280.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 278.9
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 278.5
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 277.9
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 277.0
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 276.7
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 273.8
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 273.6
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 273.4
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 273.2
GTEX-P78B-1926-SM-3P616 40-49 years, female 272.4
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 272.3
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 272.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 270.6
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 269.0
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 268.2
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 267.6
GTEX-15EOM-1526-SM-68723 20-29 years, female 267.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 266.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 265.8
GTEX-QVJO-3126-SM-COH22 60-69 years, female 265.0
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 264.9
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 264.4
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 263.7
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 263.6
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 262.7
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 262.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 262.2
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 261.6
GTEX-14BIN-1426-SM-664NI 50-59 years, female 260.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 259.3
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 259.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 258.9
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 257.9
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 255.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 254.9
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 254.1
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 252.7
GTEX-11I78-1926-SM-59878 50-59 years, female 252.5
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 251.7
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 251.4
GTEX-145ME-1226-SM-5MR87 40-49 years, female 251.0
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 250.2
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 249.8
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 248.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 246.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 245.6
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 245.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 243.5
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 243.3
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 242.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 241.9
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 241.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 239.8
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 239.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 238.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 237.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 236.2
GTEX-S32W-1226-SM-4AD67 50-59 years, female 233.1
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 233.0
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 230.6
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 230.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 229.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 229.8
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 227.8
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 227.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 227.4
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 222.5
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 222.1
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 218.8
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 213.2
GTEX-14PKV-1226-SM-6871T 20-29 years, female 212.2
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 211.1
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 210.0
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 209.4
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 207.3
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 207.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 206.5
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 206.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 205.9
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 205.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 204.6
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 202.0
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 201.8
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 200.4
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 199.8
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 198.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 197.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 195.7
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 194.3
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 193.6
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 191.7
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 191.2
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 190.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 190.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 190.1
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 188.9
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 188.6
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 187.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 184.8
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 184.0
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 183.2
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 178.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 172.3
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 171.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 169.5
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 169.1
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 168.2
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 167.5
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 167.5
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 166.8
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 165.8
GTEX-Q734-0726-SM-48TZP 40-49 years, female 159.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 155.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 151.1
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 145.7
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 125.7
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

518.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 518.2
FF:10020-101D2 47,75,84 years, female 518.2

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