We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
THOC6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
47.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
43.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
42.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
40.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
39.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
39.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
36.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
35.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
35.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
35.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
34.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
34.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
33.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
33.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
32.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
32.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
31.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
31.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
31.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
30.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
30.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
30.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
30.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
30.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
29.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
29.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
29.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
28.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
28.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
27.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
27.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
25.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
25.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
25.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
25.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
25.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
24.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
24.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
24.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
24.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
24.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
24.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
24.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
24.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
23.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
23.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
23.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
23.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
23.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
23.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
23.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
23.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
23.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
22.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
22.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
22.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
22.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
22.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
22.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
21.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
21.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
21.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
21.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
21.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
21.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
21.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
20.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
20.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
20.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
20.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
20.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
20.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
19.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
19.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
19.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
19.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
19.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
19.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
19.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
19.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
19.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
19.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
19.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
19.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
19.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
18.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
18.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
18.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
18.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
18.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
18.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
18.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
17.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
17.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
17.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
17.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
16.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
16.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
16.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
16.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
16.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
16.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
16.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
15.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
15.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
15.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
15.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
15.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
15.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
15.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
15.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
15.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
15.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
14.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
14.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
14.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
14.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
14.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
14.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
14.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
14.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
14.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
14.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
14.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
14.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
13.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
13.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
13.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
13.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
13.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
13.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
13.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
13.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
13.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
13.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
13.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
13.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
12.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
12.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
12.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
11.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
11.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
10.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
10.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
8.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
THOC6 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.4
Number of samples
231
Samples
Sample
Description
TPM
DO23525
0 years, male, NA, stage:4, alive, 1050 days
43.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
40.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
40.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
36.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
36.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
36.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
35.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
33.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
31.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
31.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
30.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
30.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
30.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
27.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
27.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
27.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
27.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
26.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
26.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
26.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
25.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
25.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
25.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
24.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
24.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
24.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
24.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
23.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
23.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
23.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
22.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
22.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
21.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
21.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
20.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
20.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
20.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
20.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
20.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
20.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
19.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
19.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
19.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
18.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
18.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
18.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
18.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
17.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
17.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
17.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
17.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
17.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
16.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
15.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
15.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
15.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
15.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
15.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
15.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
15.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
14.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
14.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
14.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
14.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
13.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
12.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
12.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
11.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
10.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
9.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
9.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
9.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
9.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
7.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
6.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
6.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
4.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
313
Tumor
0.9
413
Tumor
0.8
112
Tumor
0.8
411
Tumor
0.7
1013
Tumor
0.7
497
Tumor
0.7
815
Tumor
0.7
171
Tumor
0.6
367
Tumor
0.6
277
Tumor
0.6
285
Tumor
0.6
743
Tumor
0.6
431
Tumor
0.6
357
Tumor
0.6
951
Tumor
0.6
425
Tumor
0.6
977
Tumor
0.6
865
Tumor
0.6
685
Tumor
0.5
647
Tumor
0.5
983
Tumor
0.5
445
Tumor
0.5
1021
Tumor
0.5
883
Tumor
0.5
341
Tumor
0.5
331
Tumor
0.5
465
Tumor
0.4
695
Tumor
0.4
863
Tumor
0.4
527
Tumor
0.4
557
Tumor
0.4
385
Tumor
0.4
131
Tumor
0.4
727
Tumor
0.4
395
Tumor
0.4
427
Tumor
0.4
957
Tumor
0.4
375
Tumor
0.4
443
Tumor
0.4
387
Tumor
0.4
383
Tumor
0.4
463
Tumor
0.4
211
Tumor
0.3
433
Tumor
0.3
473
Tumor
0.3
641
Tumor
0.3
661
Tumor
0.3
343
Tumor
0.3
737
Tumor
0.3
925
Tumor
0.3
881
Tumor
0.3
724
Normal
0.3
967
Tumor
0.3
271
Tumor
0.3
1031
Tumor
0.3
227
Tumor
0.3
523
Tumor
0.3
147
Tumor
0.3
937
Tumor
0.3
567
Tumor
0.3
965
Tumor
0.2
535
Tumor
0.2
447
Tumor
0.2
185
Tumor
0.2
467
Tumor
0.2
231
Tumor
0.2
217
Tumor
0.2
421
Tumor
0.2
267
Tumor
0.2
963
Tumor
0.2
351
Tumor
0.2
857
Tumor
0.2
573
Tumor
0.2
161
Tumor
0.2
873
Tumor
0.2
953
Tumor
0.2
221
Tumor
0.2
975
Tumor
0.2
851
Tumor
0.2
663
Tumor
0.2
877
Tumor
0.2
127
Tumor
0.2
125
Tumor
0.2
741
Tumor
0.2
355
Tumor
0.2
391
Tumor
0.2
665
Tumor
0.2
635
Tumor
0.2
697
Tumor
0.1
435
Tumor
0.1
423
Tumor
0.1
627
Tumor
0.1
297
Tumor
0.1
283
Tumor
0.1
571
Tumor
0.1
813
Tumor
0.1
785
Tumor
0.1
814
Normal
0.1
861
Tumor
0.1
432
Normal
0.1
913
Tumor
0.1
365
Tumor
0.1
943
Tumor
0.1
363
Tumor
0.1
1025
Tumor
0.1
1015
Tumor
0.1
715
Tumor
0.1
1045
Tumor
0.1
195
Tumor
0.1
1014
Normal
0.1
455
Tumor
0.1
923
Tumor
0.0
515
Tumor
0.0
123
Tumor
0.0
191
Tumor
0.0
141
Tumor
0.0
1043
Tumor
0.0
192
Normal
0.0
135
Tumor
0.0
213
Tumor
0.0
471
Tumor
0.0
483
Tumor
0.0
671
Tumor
0.0
461
Tumor
0.0
444
Normal
0.0
311
Tumor
0.0
434
Normal
0.0
817
Tumor
0.0
446
Normal
0.0
517
Tumor
0.0
481
Tumor
0.0
545
Tumor
0.0
777
Tumor
0.0
525
Tumor
0.0
223
Tumor
0.0
393
Tumor
0.0
721
Tumor
0.0
187
Tumor
0.0
513
Tumor
0.0
396
Normal
0.0
224
Normal
0.0
537
Tumor
0.0
268
Normal
0.0
384
Normal
0.0
964
Normal
0.0
536
Normal
0.0
713
Tumor
0.0
218
Normal
0.0
921
Tumor
0.0
137
Tumor
0.0
388
Normal
-0.1
312
Normal
-0.1
451
Tumor
-0.1
1027
Tumor
-0.1
456
Normal
-0.1
394
Normal
-0.1
982
Normal
-0.1
368
Normal
-0.1
436
Normal
-0.1
984
Normal
-0.1
232
Normal
-0.1
563
Tumor
-0.1
113
Tumor
-0.1
493
Tumor
-0.1
978
Normal
-0.1
955
Tumor
-0.1
917
Tumor
-0.1
261
Tumor
-0.1
353
Tumor
-0.1
1016
Normal
-0.1
386
Normal
-0.1
477
Tumor
-0.1
1044
Normal
-0.1
222
Normal
-0.1
196
Normal
-0.1
132
Normal
-0.1
314
Normal
-0.1
332
Normal
-0.1
214
Normal
-0.1
867
Tumor
-0.1
258
Normal
-0.1
466
Normal
-0.1
344
Normal
-0.1
352
Normal
-0.1
358
Normal
-0.1
468
Normal
-0.1
722
Normal
-0.1
278
Normal
-0.1
491
Tumor
-0.1
866
Normal
-0.1
911
Tumor
-0.1
464
Normal
-0.1
426
Normal
-0.2
342
Normal
-0.2
272
Normal
-0.2
981
Tumor
-0.2
376
Normal
-0.2
392
Normal
-0.2
745
Tumor
-0.2
361
Tumor
-0.2
142
Normal
-0.2
284
Normal
-0.2
262
Normal
-0.2
126
Normal
-0.2
533
Tumor
-0.2
328
Normal
-0.2
298
Normal
-0.2
516
Normal
-0.2
356
Normal
-0.2
452
Normal
-0.2
354
Normal
-0.2
976
Normal
-0.2
968
Normal
-0.2
868
Normal
-0.2
956
Normal
-0.2
498
Normal
-0.2
966
Normal
-0.2
415
Tumor
-0.2
698
Normal
-0.2
124
Normal
-0.2
744
Normal
-0.2
944
Normal
-0.2
146
Normal
-0.2
136
Normal
-0.2
366
Normal
-0.2
212
Normal
-0.2
286
Normal
-0.2
526
Normal
-0.3
958
Normal
-0.3
412
Normal
-0.3
487
Tumor
-0.3
1046
Normal
-0.3
488
Normal
-0.3
188
Normal
-0.3
145
Tumor
-0.3
448
Normal
-0.3
862
Normal
-0.3
162
Normal
-0.3
1041
Tumor
-0.3
186
Normal
-0.3
746
Normal
-0.3
823
Tumor
-0.3
858
Normal
-0.3
138
Normal
-0.3
778
Normal
-0.3
524
Normal
-0.3
686
Normal
-0.3
478
Normal
-0.3
915
Tumor
-0.3
172
Normal
-0.3
114
Normal
-0.3
148
Normal
-0.3
824
Normal
-0.3
728
Normal
-0.3
755
Tumor
-0.3
416
Normal
-0.3
864
Normal
-0.3
492
Normal
-0.3
228
Normal
-0.3
128
Normal
-0.3
1028
Normal
-0.3
327
Tumor
-0.3
414
Normal
-0.3
738
Normal
-0.3
954
Normal
-0.3
716
Normal
-0.3
1026
Normal
-0.3
818
Normal
-0.3
558
Normal
-0.3
553
Tumor
-0.3
534
Normal
-0.3
514
Normal
-0.3
742
Normal
-0.3
636
Normal
-0.3
111
Normal
-0.3
878
Normal
-0.3
617
Tumor
-0.3
564
Normal
-0.3
714
Normal
-0.3
546
Normal
-0.4
618
Normal
-0.4
424
Normal
-0.4
816
Normal
-0.4
538
Normal
-0.4
574
Normal
-0.4
362
Normal
-0.4
364
Normal
-0.4
874
Normal
-0.4
938
Normal
-0.4
572
Normal
-0.4
914
Normal
-0.4
528
Normal
-0.4
628
Normal
-0.4
696
Normal
-0.4
952
Normal
-0.4
474
Normal
-0.4
472
Normal
-0.4
723
Tumor
-0.4
428
Normal
-0.4
494
Normal
-0.4
554
Normal
-0.4
916
Normal
-0.4
422
Normal
-0.4
518
Normal
-0.4
568
Normal
-0.4
852
Normal
-0.4
672
Normal
-0.4
1042
Normal
-0.5
482
Normal
-0.5
484
Normal
-0.5
1032
Normal
-0.5
882
Normal
-0.5
756
Normal
-0.5
462
Normal
-0.5
662
Normal
-0.5
642
Normal
-0.5
616
Normal
-0.5
666
Normal
-0.5
664
Normal
-0.6
918
Normal
-0.6
786
Normal
-0.6
924
Normal
-0.6
648
Normal
-0.6
912
Normal
-0.6
922
Normal
-0.6
926
Normal
-0.6
615
Tumor
-0.7
1022
Normal
-0.7
884
Normal
-0.7
257
Tumor
-0.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
