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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
81.4
nTPM
HPA Brain:
102.6
nTPM
GTEx:
81.4
nTPM
FANTOM5:
380.0
Scaled Tags Per Million
Pig:
306.5
nTPM
Mouse:
574.4
nTPM
Allen mouse:
24.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.6
Sample id
Sample description
nTPM
Amygdala nTPM: 102.6
2814
Male, age 76, right hemisphere
124.8
1987
Female, age 91, left hemisphere
117.5
2514
Male, age 75, right hemisphere
106.5
2517
Female, age 94, left hemisphere
85.1
2695
Female, age 67, right hemisphere
79.3
Basal amygdala nTPM: 87.6
2110
Male, age 80, left hemisphere
103.5
1955
Male, age 76, both hemispheres
101.0
2243
Female, age 91, right hemisphere
100.2
2609
Male, age 75, right hemisphere
93.0
2685
Female, age 94, left hemisphere
85.2
2827
Female, age 67, right hemisphere
42.6
Central amygdala nTPM: 100.0
1905
Male, age 76, both hemispheres
117.9
2239
Male, age 80, left hemisphere
106.7
2515
Male, age 75, right hemisphere
104.2
2701
Female, age 91, right hemisphere
87.3
2826
Female, age 94, left hemisphere
83.6
Corticomedial amygdala nTPM: 98.9
2829
Male, age 80, left hemisphere
129.8
2242
Female, age 91, right hemisphere
112.5
2429
Female, age 94, left hemisphere
102.5
2240
Male, age 76, both hemispheres
100.6
2428
Male, age 75, right hemisphere
98.4
2535
Female, age 67, right hemisphere
49.4
Lateral amygdala nTPM: 81.8
1883
Male, age 76, both hemispheres
123.7
2534
Female, age 94, left hemisphere
96.2
2516
Male, age 75, right hemisphere
89.2
2255
Female, age 91, right hemisphere
69.9
2256
Male, age 80, left hemisphere
65.3
2830
Female, age 67, right hemisphere
46.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
81.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 81.4
Samples: 152
Max nTPM: 151.4
Min nTPM: 26.1
Std nTPM: 25.1
Median nTPM: 78.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
151.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
141.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
139.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
138.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
136.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
129.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
127.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
127.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
121.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
120.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
120.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
119.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
116.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
115.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
111.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
111.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
110.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
109.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
109.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
109.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
109.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
107.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
107.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
107.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
107.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
106.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
105.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
105.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
105.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
104.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
104.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
103.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
102.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
102.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
100.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
100.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
99.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
99.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
99.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
99.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
97.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
97.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
96.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
96.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
96.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
95.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
95.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
94.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
93.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
93.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
92.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
91.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
91.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
91.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
91.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
90.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
89.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
87.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
87.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
87.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
86.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
86.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
85.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
84.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
82.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
82.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
82.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
82.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
82.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
81.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
81.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
81.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
80.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
80.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
79.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
79.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
78.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
78.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
77.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
77.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
77.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
77.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
77.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
77.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
76.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
76.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
76.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
75.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
75.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
74.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
74.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
73.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
72.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
72.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
70.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
70.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
70.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
69.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
69.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
69.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
68.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
68.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
68.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
67.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
67.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
67.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
67.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
66.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
65.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
64.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
64.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
63.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
62.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
61.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
61.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
60.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
60.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
60.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
58.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
58.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
57.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
56.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
55.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
55.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
54.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
53.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
53.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
52.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
52.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
51.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
51.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
51.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
50.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
50.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
49.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
49.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
48.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
47.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
46.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
40.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
40.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
39.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
39.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
39.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
38.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
32.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
26.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
574.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 574.4
Samples: 4
Max nTPM: 598.3
Min nTPM: 550.2
Sample A
Male
594.0
Sample B
Male
598.3
Sample C
Female
555.0
Sample D
Female
550.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.