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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
2.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAPSA is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
579.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
374.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
302.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
285.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
231.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
202.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
197.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
173.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
169.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
158.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
157.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
153.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
150.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
150.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
146.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
143.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
131.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
130.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
128.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
115.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
114.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
110.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
109.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
109.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
106.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
101.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
100.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
96.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
95.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
95.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
94.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
93.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
92.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
86.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
86.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
84.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
83.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
81.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
79.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
77.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
76.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
76.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
75.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
75.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
74.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
71.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
70.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
68.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
64.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
64.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
62.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
59.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
59.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
59.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
58.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
55.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
54.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
53.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
53.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
53.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
53.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
53.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
53.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
53.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
51.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
50.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
50.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
50.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
50.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
49.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
49.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
49.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
49.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
48.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
47.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
47.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
44.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
44.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
44.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
43.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
43.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
43.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
42.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
41.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
41.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
40.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
39.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
38.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
38.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
38.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
38.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
38.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
37.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
37.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
37.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
36.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
36.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
36.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
36.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
33.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
32.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
32.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
32.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
31.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
30.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
29.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
28.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
26.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
25.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
25.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
22.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
21.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
18.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
16.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
10.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
9.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
8.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
8.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
7.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
7.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
7.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
6.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
6.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
5.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
5.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
5.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
5.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
5.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
5.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
5.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
5.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
5.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
4.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
4.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
4.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
4.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
4.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
4.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
4.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
3.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
3.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
3.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
3.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
3.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
3.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
3.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
3.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
3.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
3.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
3.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
3.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
2.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
2.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
2.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
2.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
2.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
2.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
2.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
2.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
2.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
2.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
2.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
2.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
2.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
2.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
2.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
2.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
2.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
2.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
2.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
2.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
1.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
1.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
1.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
1.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
1.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
1.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
1.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
1.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
1.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
1.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
1.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
1.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
1.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
1.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
1.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
0.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
0.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
0.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
0.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
0.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
0.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
0.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
0.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
0.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
0.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
0.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
0.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
0.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
0.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
0.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
0.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
0.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
0.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
0.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
0.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
0.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
0.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
0.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
0.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
0.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
0.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
0.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
0.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
0.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
0.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
0.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
0.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
0.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
0.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
0.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
0.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
0.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
0.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
0.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
0.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
0.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
0.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAPSA is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
518.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
365.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
175.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
101.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
89.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
73.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
65.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
63.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
59.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
50.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
50.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
47.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
47.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
37.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
9.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
7.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
6.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
5.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
3.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
3.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
3.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
3.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
3.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
2.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
2.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
1.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
1.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
0.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
0.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
0.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
0.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
0.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
0.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
0.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
0.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
0.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
0.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
0.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
0.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
0.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
0.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
0.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
0.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAPSA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
91.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
803.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
584.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
531.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
504.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
456.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
435.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
420.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
412.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
411.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
389.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
363.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
346.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
312.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
308.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
302.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
297.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
295.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
284.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
269.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
258.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
256.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
252.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
250.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
249.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
245.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
237.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
235.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
231.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
230.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
227.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
226.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
218.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
212.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
209.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
206.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
206.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
202.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
189.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
188.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
185.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
184.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
182.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
181.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
179.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
177.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
170.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
165.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
165.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
163.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
162.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
162.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
160.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
158.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
156.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
152.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
150.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
149.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
146.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
140.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
135.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
134.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
134.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
133.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
129.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
127.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
125.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
122.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
121.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
120.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
117.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
116.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
116.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
114.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
114.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
113.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
110.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
108.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
107.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
107.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
106.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
105.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
105.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
102.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
100.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
99.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
98.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
96.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
95.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
93.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
92.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
92.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
92.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
91.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
90.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
89.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
88.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
87.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
86.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
83.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
82.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
82.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
82.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
82.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
81.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
80.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
80.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
80.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
80.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
78.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
78.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
77.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
76.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
74.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
72.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
72.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
71.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
71.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
70.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
69.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
68.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
67.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
67.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
66.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
66.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
66.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
65.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
63.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
61.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
61.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
61.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
61.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
61.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
60.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
60.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
59.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
58.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
58.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
58.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
55.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
54.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
54.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
53.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
52.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
52.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
52.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
51.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
51.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
51.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
51.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
51.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
50.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
50.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
49.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
48.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
48.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
47.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
47.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
47.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
46.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
45.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
45.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
44.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
43.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
43.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
42.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
38.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
37.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
37.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
37.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
36.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
36.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
35.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
30.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
26.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
26.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
25.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
23.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
22.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
10.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
7.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
6.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
6.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
6.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088920001
Normal
1.4
CPT0012770003
Normal
1.4
CPT0026420001
Normal
1.4
CPT0078800003
Tumor
1.3
CPT0089040001
Normal
1.3
CPT0079430001
Normal
1.3
CPT0001180009
Tumor
1.3
CPT0075170001
Normal
1.2
CPT0006950001
Normal
1.2
CPT0012090003
Normal
1.2
CPT0009080003
Normal
1.1
CPT0006730001
Normal
1.0
CPT0066520001
Normal
1.0
CPT0092800003
Normal
1.0
CPT0014350001
Normal
1.0
CPT0078840001
Normal
1.0
CPT0078940001
Normal
1.0
CPT0076350001
Normal
1.0
CPT0088780001
Normal
0.9
CPT0066430001
Normal
0.9
CPT0001350001
Normal
0.9
CPT0077140001
Normal
0.9
CPT0069010001
Normal
0.9
CPT0010170001
Normal
0.9
CPT0000790001
Normal
0.9
CPT0087050003
Normal
0.9
CPT0018250001
Normal
0.8
CPT0084590001
Normal
0.8
CPT0089480003
Normal
0.8
CPT0086890003
Normal
0.8
CPT0077500001
Normal
0.8
CPT0065450001
Normal
0.8
CPT0092740003
Normal
0.8
CPT0017450001
Normal
0.8
CPT0001230001
Normal
0.8
CPT0019160001
Normal
0.7
CPT0088640003
Normal
0.7
CPT0012920003
Normal
0.7
CPT0024680001
Normal
0.7
CPT0011410003
Tumor
0.7
CPT0065820001
Normal
0.7
CPT0012640003
Normal
0.6
CPT0001190001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0025060001
Normal
0.6
CPT0079000001
Normal
0.6
CPT0001550001
Normal
0.6
CPT0086370003
Normal
0.6
CPT0025920001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0078670001
Normal
0.6
CPT0000660001
Normal
0.5
CPT0001270001
Normal
0.5
CPT0082010001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0063330001
Normal
0.5
CPT0088710001
Normal
0.5
CPT0078530001
Normal
0.4
CPT0001510001
Normal
0.4
CPT0002370001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0025610001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0000890001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0009020003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0088570001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0079300001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0092190003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0086830003
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0065430003
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0001500009
Tumor
-0.5
CPT0010120001
Normal
-0.5
CPT0025170003
Tumor
-0.5
CPT0001220008
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0092290003
Tumor
-0.7
CPT0079510001
Normal
-0.7
CPT0075560003
Tumor
-0.7
CPT0023690003
Tumor
-0.7
CPT0079230003
Tumor
-0.7
CPT0063320003
Tumor
-0.7
CPT0017410003
Tumor
-0.8
CPT0066480003
Tumor
-0.8
CPT0019990003
Tumor
-0.9
CPT0010110003
Tumor
-0.9
CPT0078930003
Tumor
-1.0
CPT0025050003
Tumor
-1.1
CPT0017850003
Tumor
-1.1
CPT0086820003
Tumor
-1.1
CPT0007860003
Tumor
-1.1
CPT0015730003
Tumor
-1.1
CPT0092730003
Tumor
-1.1
CPT0065810003
Tumor
-1.1
CPT0014450004
Tumor
-1.2
CPT0087040003
Tumor
-1.2
CPT0012670003
Tumor
-1.2
CPT0001540009
Tumor
-1.2
CPT0025290003
Tumor
-1.2
CPT0009060003
Tumor
-1.2
CPT0092790003
Tumor
-1.2
CPT0089020003
Tumor
-1.2
CPT0069000003
Tumor
-1.2
CPT0086360003
Tumor
-1.3
CPT0015910003
Tumor
-1.3
CPT0000640003
Tumor
-1.3
CPT0066470004
Tumor
-1.3
CPT0086030003
Tumor
-1.3
CPT0079380003
Tumor
-1.4
CPT0021240003
Tumor
-1.4
CPT0088760003
Tumor
-1.4
CPT0000780007
Tumor
-1.4
CPT0000870016
Tumor
-1.4
CPT0065930003
Tumor
-1.4
CPT0002350011
Tumor
-1.4
CPT0071150004
Tumor
-1.4
CPT0020120003
Tumor
-1.4
CPT0075720003
Tumor
-1.4
CPT0076330003
Tumor
-1.5
CPT0079270003
Tumor
-1.5
CPT0064370003
Tumor
-1.5
CPT0077490003
Tumor
-1.5
CPT0088630003
Tumor
-1.5
CPT0025580004
Tumor
-1.5
CPT0024670003
Tumor
-1.6
CPT0023350003
Tumor
-1.6
CPT0081990003
Tumor
-1.6
CPT0025880003
Tumor
-1.6
CPT0084560003
Tumor
-1.6
CPT0088900003
Tumor
-1.6
CPT0086870003
Tumor
-1.6
CPT0089460004
Tumor
-1.6
CPT0065870003
Tumor
-1.7
CPT0011240003
Tumor
-1.7
CPT0006440003
Tumor
-1.7
CPT0012900004
Tumor
-1.7
CPT0078830003
Tumor
-1.7
CPT0065690003
Tumor
-1.7
CPT0006630003
Tumor
-1.7
CPT0001260009
Tumor
-1.8
CPT0069160003
Tumor
-1.8
CPT0078660003
Tumor
-1.8
CPT0015810003
Tumor
-1.9
CPT0078510003
Tumor
-1.9
CPT0085670003
Tumor
-1.9
CPT0025230003
Tumor
-1.9
CPT0078990003
Tumor
-1.9
CPT0077310003
Tumor
-1.9
CPT0001340003
Tumor
-1.9
CPT0088690003
Tumor
-1.9
CPT0009000003
Tumor
-1.9
CPT0063630003
Tumor
-2.0
CPT0012280003
Tumor
-2.0
CPT0077110003
Tumor
-2.0
CPT0019130003
Tumor
-2.0
CPT0075130003
Tumor
-2.0
CPT0025350003
Tumor
-2.0
CPT0026410003
Tumor
-2.0
CPT0088550004
Tumor
-2.1
CPT0092160003
Tumor
-2.1
CPT0012080003
Tumor
-2.1
CPT0088970003
Tumor
-2.1
CPT0079480003
Tumor
-2.2
CPT0025110003
Tumor
-2.2
CPT0081600003
Tumor
-2.2
CPT0012550003
Tumor
-2.2
CPT0012180003
Tumor
-2.3
CPT0010160003
Tumor
-2.3
CPT0081880003
Tumor
-2.4
CPT0002270011
Tumor
-2.4
CPT0086950003
Tumor
-2.4
CPT0014370004
Tumor
-2.5
CPT0079410003
Tumor
-2.7
CPT0012370003
Tumor
-2.7
CPT0079180003
Tumor
-2.8
CPT0088480003
Tumor
-3.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
