HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.5 nTPM
HPA Brain:126.3 nTPM
GTEx:15.5 nTPM
FANTOM5:84.7 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:1.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017076
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 126.3
Sample id Sample description nTPM
Hippocampus
nTPM: 109.1
1911 Female, age 85, right hemisphere 131.1
2148 Female, age 91, left hemisphere 115.6
2529 Female, age 94, left hemisphere 114.4
1898 Male, age 80, left hemisphere 98.8
2621 Female, age 67, right hemisphere 98.0
1855 Male, age 76, left hemisphere 96.7
Dentate gyrus
nTPM: 126.3
2010 Male, age 76, both hemispheres 176.6
2528 Male, age 74, both hemispheres 137.3
2530 Female, age 94, left hemisphere 122.9
2531 Female, age 67, both hemispheres 116.1
2246 Female, age 85, both hemispheres 112.7
1927 Female, age 91, both hemispheres 92.2
Entorhinal gyrus
nTPM: 98.5
2117 Female, age 91, right hemisphere 118.2
2613 Female, age 94, left hemisphere 110.8
1938 Female, age 85, left hemisphere 99.5
1787 Male, age 76, left hemisphere 90.0
2686 Male, age 75, right hemisphere 87.8
2764 Male, age 80, right hemisphere 84.8
Hippocampus, CA1
nTPM: 100.9
2082 Female, age 91, right hemisphere 129.2
1873 Female, age 85, both hemispheres 114.6
2045 Male, age 76, both hemispheres 99.4
2527 Male, age 74, both hemispheres 97.7
2749 Male, age 80, left hemisphere 63.8
Hippocampus, CA2
nTPM: 104.6
2113 Female, age 91, right hemisphere 128.1
2249 Male, age 74, both hemispheres 119.7
1940 Female, age 85, left hemisphere 114.9
2437 Female, age 94, left hemisphere 101.8
1963 Male, age 80, left hemisphere 91.5
1892 Male, age 76, both hemispheres 71.7
Hippocampus, CA3
nTPM: 103.6
2620 Female, age 94, left hemisphere 125.8
1891 Female, age 85, both hemispheres 125.3
2861 Female, age 67, both hemispheres 109.4
1867 Male, age 76, both hemispheres 102.7
2137 Male, age 80, left hemisphere 80.0
2436 Male, age 74, both hemispheres 78.3
Parahippocampal cortex
nTPM: 96.7
2692 Male, age 74, both hemispheres 118.9
2532 Female, age 72, left hemisphere 111.3
2018 Male, age 76, both hemispheres 108.4
2693 Female, age 94, both hemispheres 108.0
2245 Female, age 91, both hemispheres 100.7
1933 Female, age 85, both hemispheres 91.1
2622 Female, age 67, right hemisphere 91.1
1990 Female, age 91, right hemisphere 88.6
1850 Male, age 80, both hemispheres 78.6
2250 Female, age 67, right hemisphere 70.0
Perirhinal gyrus
nTPM: 76.0
2521 Female, age 94, right hemisphere 90.6
1841 Female, age 85, right hemisphere 77.0
1794 Male, age 80, right hemisphere 73.7
2848 Male, age 76, right hemisphere 70.1
1847 Female, age 91, left hemisphere 68.4
Subiculum
nTPM: 114.3
2042 Male, age 76, both hemispheres 147.9
2729 Female, age 91, right hemisphere 130.7
2619 Male, age 74, both hemispheres 114.2
1901 Male, age 80, both hemispheres 106.1
1977 Female, age 85, both hemispheres 101.1
2438 Female, age 94, left hemisphere 85.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 75.1
Min nTPM: 2.9
Std nTPM: 10.3
Median nTPM: 13.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 75.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 55.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 54.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 49.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 49.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 35.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 35.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 32.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 84.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.7
FF:10153-102I9 76 years, female 105.0
FF:10169-103B7 60 years, female 64.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.9
Pig sample Sample description nTPM
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 9.0
Sample C Male 9.6
Sample D Male 8.5
Dorsal hippocampus
nTPM: 6.0
Samples: 4

Max nTPM: 7.3
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 7.3
Sample C Male 6.4
Sample D Male 5.7
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 12.9
Sample C Male 12.5
Sample D Male 11.7
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 11.7
Min nTPM: 6.1
Sample A Female 7.8
Sample B Female 8.7
Sample C Male 11.7
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 1.5
Min nTPM: 1.4
Sample A Male 1.4
Sample B Male 1.4
Sample C Female 1.5
Sample D Female 1.4
Hippocampal formation
nTPM: 1.0
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.8
Sample A Male 0.8
Sample B Male 1.1
Sample C Female 1.1
Sample D Female 1.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69672772 Antisense, RP_050428_04_D12, Mouse strain C57BL/6J (56 days, male) 0.5

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