HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:22.5 nTPM
GTEx:11.6 nTPM
FANTOM5:19.1 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:8.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048725Antibody HPA054662
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
1898 Male, age 80, left hemisphere 22.6
2621 Female, age 67, right hemisphere 18.2
1911 Female, age 85, right hemisphere 17.4
1855 Male, age 76, left hemisphere 15.8
2148 Female, age 91, left hemisphere 15.3
2529 Female, age 94, left hemisphere 12.5
Dentate gyrus
nTPM: 16.5
2010 Male, age 76, both hemispheres 21.0
2531 Female, age 67, both hemispheres 16.9
1927 Female, age 91, both hemispheres 16.2
2530 Female, age 94, left hemisphere 16.0
2246 Female, age 85, both hemispheres 14.9
2528 Male, age 74, both hemispheres 14.3
Entorhinal gyrus
nTPM: 16.5
2613 Female, age 94, left hemisphere 20.6
1938 Female, age 85, left hemisphere 18.6
2764 Male, age 80, right hemisphere 18.0
1787 Male, age 76, left hemisphere 15.3
2686 Male, age 75, right hemisphere 13.8
2117 Female, age 91, right hemisphere 12.5
Hippocampus, CA1
nTPM: 16.3
2749 Male, age 80, left hemisphere 21.7
1873 Female, age 85, both hemispheres 20.8
2045 Male, age 76, both hemispheres 14.1
2082 Female, age 91, right hemisphere 12.9
2527 Male, age 74, both hemispheres 11.9
Hippocampus, CA2
nTPM: 16.1
1940 Female, age 85, left hemisphere 21.4
1963 Male, age 80, left hemisphere 15.9
2113 Female, age 91, right hemisphere 15.8
2249 Male, age 74, both hemispheres 15.8
1892 Male, age 76, both hemispheres 14.9
2437 Female, age 94, left hemisphere 12.6
Hippocampus, CA3
nTPM: 19.1
2137 Male, age 80, left hemisphere 26.3
1867 Male, age 76, both hemispheres 19.5
2861 Female, age 67, both hemispheres 18.9
2620 Female, age 94, left hemisphere 17.5
2436 Male, age 74, both hemispheres 17.0
1891 Female, age 85, both hemispheres 15.2
Parahippocampal cortex
nTPM: 19.6
2532 Female, age 72, left hemisphere 28.4
2693 Female, age 94, both hemispheres 21.3
1850 Male, age 80, both hemispheres 21.0
2622 Female, age 67, right hemisphere 20.9
1933 Female, age 85, both hemispheres 19.4
2245 Female, age 91, both hemispheres 19.1
2018 Male, age 76, both hemispheres 18.9
1990 Female, age 91, right hemisphere 17.8
2250 Female, age 67, right hemisphere 16.2
2692 Male, age 74, both hemispheres 13.3
Perirhinal gyrus
nTPM: 22.5
1841 Female, age 85, right hemisphere 34.4
1794 Male, age 80, right hemisphere 29.5
2521 Female, age 94, right hemisphere 21.3
1847 Female, age 91, left hemisphere 15.3
2848 Male, age 76, right hemisphere 11.8
Subiculum
nTPM: 14.0
1901 Male, age 80, both hemispheres 18.1
2042 Male, age 76, both hemispheres 17.2
1977 Female, age 85, both hemispheres 14.5
2619 Male, age 74, both hemispheres 13.6
2729 Female, age 91, right hemisphere 12.9
2438 Female, age 94, left hemisphere 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 48.0
Min nTPM: 4.4
Std nTPM: 4.7
Median nTPM: 10.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 22.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 21.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 19.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 19.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.1
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 15.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.8
Pig sample Sample description nTPM
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.2
Sample A Female 4.8
Sample B Female 3.2
Sample C Male 4.5
Sample D Male 3.6
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.9
Sample A Female 5.8
Sample B Female 5.1
Sample C Male 5.1
Sample D Male 3.9
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 7.5
Min nTPM: 4.3
Sample A Female 7.5
Sample B Female 5.4
Sample C Male 5.7
Sample D Male 4.3
Ventral hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.0
Sample A Female 6.0
Sample B Female 5.0
Sample C Male 6.5
Sample D Male 5.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 4.5
Sample C Female 6.5
Sample D Female 7.0
Hippocampal formation
nTPM: 8.3
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 9.3
Sample C Female 8.2
Sample D Female 9.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69837498 Antisense, RP_050217_02_B06, Mouse strain C57BL/6J (56 days, male) 0.4
71920515 Antisense, RP_051017_02_G08, Mouse strain C57BL/6J (56 days, male) 0.4

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