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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
147.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
573.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
313.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
306.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
267.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
249.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
230.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
224.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
220.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
216.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
212.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
206.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
202.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
197.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
197.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
196.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
189.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
184.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
180.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
171.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
167.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
166.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
163.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
163.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
162.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
158.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
158.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
153.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
152.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
150.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
148.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
143.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
141.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
137.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
129.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
125.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
125.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
123.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
115.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
114.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
114.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
112.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
111.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
107.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
104.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
100.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
95.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
94.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
93.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
90.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
87.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
85.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
80.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
79.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
74.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
67.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
61.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
60.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
57.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
57.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
57.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
53.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
46.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
111.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
766.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
512.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
312.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
266.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
217.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
208.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
208.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
202.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
199.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
198.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
196.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
189.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
183.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
183.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
182.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
180.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
178.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
178.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
177.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
174.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
173.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
173.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
171.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
171.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
169.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
169.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
169.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
169.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
168.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
168.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
167.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
167.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
167.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
167.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
166.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
165.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
164.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
163.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
163.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
162.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
162.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
161.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
159.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
158.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
158.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
157.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
155.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
154.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
154.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
154.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
153.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
153.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
152.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
151.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
150.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
150.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
149.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
149.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
149.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
148.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
148.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
148.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
146.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
145.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
145.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
145.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
145.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
144.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
144.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
144.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
143.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
143.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
142.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
142.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
142.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
141.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
141.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
141.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
140.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
140.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
140.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
140.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
139.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
139.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
138.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
138.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
138.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
137.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
137.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
137.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
137.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
136.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
136.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
135.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
135.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
135.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
135.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
135.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
135.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
135.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
134.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
134.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
134.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
133.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
133.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
133.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
132.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
132.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
132.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
132.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
132.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
131.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
131.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
131.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
131.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
131.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
131.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
131.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
130.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
130.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
129.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
129.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
129.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
129.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
128.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
128.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
128.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
128.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
128.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
127.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
127.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
127.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
127.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
126.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
126.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
126.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
126.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
125.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
125.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
125.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
125.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
125.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
125.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
125.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
125.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
125.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
124.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
124.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
124.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
124.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
124.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
124.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
124.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
123.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
123.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
123.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
123.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
122.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
122.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
122.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
122.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
122.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
122.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
122.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
122.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
121.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
121.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
121.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
121.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
120.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
120.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
119.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
119.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
119.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
119.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
119.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
119.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
118.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
118.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
118.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
118.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
118.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
118.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
117.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
117.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
117.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
117.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
117.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
117.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
117.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
117.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
116.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
116.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
116.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
116.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
116.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
116.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
115.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
115.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
115.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
115.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
115.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
114.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
114.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
114.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
114.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
114.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
114.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
114.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
114.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
113.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
113.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
113.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
113.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
113.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
113.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
113.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
113.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
113.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
113.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
113.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
113.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
113.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
113.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
113.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
113.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
113.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
113.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
112.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
112.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
112.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
112.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
112.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
112.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
111.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
111.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
111.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
111.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
111.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
110.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
110.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
110.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
110.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
110.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
110.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
110.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
110.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
110.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
110.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
110.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
109.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
109.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
109.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
109.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
109.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
109.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
109.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
108.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
108.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
108.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
108.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
108.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
108.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
108.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
108.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
108.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
107.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
107.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
107.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
107.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
107.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
107.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
107.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
107.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
106.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
106.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
106.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
106.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
106.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
105.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
105.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
105.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
105.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
105.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
105.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
104.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
104.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
104.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
104.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
104.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
104.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
104.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
104.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
103.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
103.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
103.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
103.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
102.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
102.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
102.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
102.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
102.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
102.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
101.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
101.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
101.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
101.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
101.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
101.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
100.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
100.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
100.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
100.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
100.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
100.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
100.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
100.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
100.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
100.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
100.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
100.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
99.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
99.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
99.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
99.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
98.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
98.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
98.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
98.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
98.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
98.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
98.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
98.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
98.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
98.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
97.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
97.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
97.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
97.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
97.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
96.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
96.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
96.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
96.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
96.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
96.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
96.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
96.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
95.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
95.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
95.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
95.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
94.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
94.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
94.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
94.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
94.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
94.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
94.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
93.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
93.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
93.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
93.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
93.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
92.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
92.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
92.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
92.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
91.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
91.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
91.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
91.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
90.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
90.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
90.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
89.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
89.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
89.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
89.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
88.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
88.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
88.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
87.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
87.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
87.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
87.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
87.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
87.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
86.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
86.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
86.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
86.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
86.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
86.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
86.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
86.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
86.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
86.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
86.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
85.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
85.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
85.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
85.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
84.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
84.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
84.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
84.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
84.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
84.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
83.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
83.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
83.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
83.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
83.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
82.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
82.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
82.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
82.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
82.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
82.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
82.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
81.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
81.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
81.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
81.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
80.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
80.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
80.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
79.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
79.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
79.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
78.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
78.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
78.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
78.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
77.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
77.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
77.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
77.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
77.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
76.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
76.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
76.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
76.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
76.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
75.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
75.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
74.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
74.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
74.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
74.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
73.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
73.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
73.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
72.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
72.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
72.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
72.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
72.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
72.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
71.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
71.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
71.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
70.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
69.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
69.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
69.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
69.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
68.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
68.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
68.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
68.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
68.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
67.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
67.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
67.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
67.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
66.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
64.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
64.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
64.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
63.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
62.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
61.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
61.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
60.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
60.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
59.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
56.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
56.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
56.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
55.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
54.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
53.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
52.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
52.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
51.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
51.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
49.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
49.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
49.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
47.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
47.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
46.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
45.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
44.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
41.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
37.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
35.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
35.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
32.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
31.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
27.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
25.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
25.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
24.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
124.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
214.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
203.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
201.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
199.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
199.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
191.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
191.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
187.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
183.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
177.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
175.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
174.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
172.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
172.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
170.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
170.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
167.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
163.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
157.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
155.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
154.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
154.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
153.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
150.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
148.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
147.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
143.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
143.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
143.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
143.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
142.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
141.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
140.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
137.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
136.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
135.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
134.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
134.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
134.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
134.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
130.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
130.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
129.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
129.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
128.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
128.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
126.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
124.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
124.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
123.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
123.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
121.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
118.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
117.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
117.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
116.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
114.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
113.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
110.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
109.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
109.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
109.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
108.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
107.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
107.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
107.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
106.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
105.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
104.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
104.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
103.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
102.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
101.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
99.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
98.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
98.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
98.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
96.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
96.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
94.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
93.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
93.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
91.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
90.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
89.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
88.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
88.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
87.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
86.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
79.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
76.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
71.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
70.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
69.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
68.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
59.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
57.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
55.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
43.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BGRL is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
251.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
246.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
241.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
238.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
220.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
207.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
187.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
176.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
163.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
158.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
149.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
147.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
145.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
144.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
137.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
136.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
132.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
129.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
128.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
126.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
125.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
123.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
122.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
121.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
118.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
117.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
113.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
113.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
111.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
110.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
109.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
108.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
108.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
108.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
107.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
106.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
105.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
104.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
104.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
102.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
101.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
100.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
100.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
99.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
98.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
98.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
98.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
97.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
96.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
95.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
95.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
94.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
94.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
93.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
93.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
91.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
91.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
90.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
90.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
89.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
88.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
87.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
86.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
86.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
85.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
85.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
85.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
85.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
84.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
84.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
84.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
83.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
83.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
82.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
82.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
82.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
80.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
80.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
80.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
79.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
79.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
78.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
78.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
78.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
78.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
78.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
77.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
77.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
77.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
77.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
76.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
76.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
75.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
75.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
74.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
74.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
74.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
74.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
74.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
74.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
74.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
74.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
73.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
73.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
73.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
73.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
73.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
73.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
73.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
73.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
72.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
72.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
72.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
71.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
71.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
70.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
70.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
70.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
70.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
70.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
69.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
69.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
68.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
68.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
67.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
67.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
67.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
67.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
67.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
66.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
66.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
66.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
66.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
65.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
65.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
65.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
65.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
64.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
64.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
64.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
63.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
63.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
63.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
63.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
63.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
62.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
62.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
61.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
61.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
61.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
59.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
59.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
59.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
59.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
59.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
58.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
58.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
57.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
57.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
57.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
56.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
56.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
56.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
55.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
55.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
55.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
55.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
55.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
54.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
54.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
54.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
54.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
53.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
53.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
53.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
52.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
52.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
52.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
52.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
51.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
51.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
51.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
51.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
50.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
50.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
50.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
49.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
49.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
49.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
49.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
48.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
48.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
48.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
48.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
47.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
47.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
47.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
47.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
46.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
45.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
45.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
45.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
45.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
44.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
44.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
44.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
43.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
43.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
43.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
43.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
43.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
42.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
42.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
41.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
41.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
41.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
40.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
39.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
39.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
38.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
38.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
38.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
37.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
37.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
37.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
37.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
37.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
37.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
37.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
36.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
36.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
36.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
35.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
35.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
35.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
34.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
32.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
32.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
31.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
31.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
30.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
27.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
27.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
27.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
26.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
25.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
24.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
22.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
15.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.2
CPT0011240003
Tumor
1.1
CPT0088550004
Tumor
0.9
CPT0078660003
Tumor
0.8
CPT0066480003
Tumor
0.8
CPT0010120001
Normal
0.7
CPT0079510001
Normal
0.7
CPT0075560003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0024680001
Normal
0.6
CPT0025170003
Tumor
0.6
CPT0015910003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0065690003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0084560003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0078990003
Tumor
0.4
CPT0009060003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0012670003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0018250001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0025050003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0064370003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0012550003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0014130001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0001340003
Tumor
-0.2
CPT0081620001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0088710001
Normal
-0.3
CPT0012180003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0092740003
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0001350001
Normal
-0.5
CPT0076330003
Tumor
-0.5
CPT0088780001
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
