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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
91.4
nTPM
HPA Brain:
63.9
nTPM
GTEx:
91.4
nTPM
FANTOM5:
68.1
Scaled Tags Per Million
Pig:
37.3
nTPM
Mouse:
136.2
nTPM
Allen mouse:
21.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
63.9
Sample id
Sample description
nTPM
Amygdala nTPM: 54.6
2695
Female, age 67, right hemisphere
61.9
2517
Female, age 94, left hemisphere
55.4
2814
Male, age 76, right hemisphere
53.5
2514
Male, age 75, right hemisphere
53.4
1987
Female, age 91, left hemisphere
48.9
Basal amygdala nTPM: 60.1
2609
Male, age 75, right hemisphere
68.4
2827
Female, age 67, right hemisphere
68.1
2243
Female, age 91, right hemisphere
67.6
2685
Female, age 94, left hemisphere
56.5
2110
Male, age 80, left hemisphere
50.3
1955
Male, age 76, both hemispheres
49.8
Central amygdala nTPM: 61.8
2826
Female, age 94, left hemisphere
94.6
2239
Male, age 80, left hemisphere
59.7
2515
Male, age 75, right hemisphere
55.1
1905
Male, age 76, both hemispheres
51.1
2701
Female, age 91, right hemisphere
48.4
Corticomedial amygdala nTPM: 55.2
2535
Female, age 67, right hemisphere
66.1
2829
Male, age 80, left hemisphere
58.6
2242
Female, age 91, right hemisphere
55.1
2429
Female, age 94, left hemisphere
52.9
2428
Male, age 75, right hemisphere
52.0
2240
Male, age 76, both hemispheres
46.4
Lateral amygdala nTPM: 63.9
2534
Female, age 94, left hemisphere
79.9
2830
Female, age 67, right hemisphere
76.4
2516
Male, age 75, right hemisphere
66.3
1883
Male, age 76, both hemispheres
58.1
2256
Male, age 80, left hemisphere
53.6
2255
Female, age 91, right hemisphere
49.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
91.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 91.4
Samples: 152
Max nTPM: 319.6
Min nTPM: 21.0
Std nTPM: 29.2
Median nTPM: 88.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
319.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
169.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
163.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
147.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
139.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
137.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
129.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
128.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
127.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
127.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
125.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
121.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
121.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
119.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
118.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
116.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
115.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
115.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
114.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
114.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
112.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
112.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
112.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
112.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
111.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
110.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
110.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
109.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
109.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
107.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
107.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
106.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
106.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
106.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
105.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
105.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
105.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
104.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
104.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
104.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
103.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
103.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
101.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
100.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
100.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
100.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
100.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
99.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
99.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
99.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
99.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
98.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
98.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
97.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
97.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
97.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
97.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
96.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
96.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
95.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
95.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
95.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
95.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
94.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
93.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
93.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
93.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
92.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
92.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
92.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
92.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
91.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
91.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
90.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
90.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
88.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
87.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
87.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
86.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
86.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
85.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
85.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
85.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
85.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
84.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
84.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
83.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
83.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
83.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
83.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
82.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
82.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
81.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
81.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
81.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
80.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
80.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
80.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
79.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
79.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
79.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
79.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
78.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
78.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
77.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
77.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
76.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
76.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
76.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
76.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
75.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
75.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
75.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
75.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
75.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
75.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
75.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
73.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
73.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
73.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
73.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
72.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
72.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
71.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
70.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
70.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
70.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
69.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
68.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
68.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
68.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
66.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
64.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
64.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
63.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
63.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
63.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
62.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
61.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
61.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
59.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
59.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
58.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
57.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
54.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
52.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
51.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
51.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
50.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
49.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
45.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
21.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
136.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 136.2
Samples: 4
Max nTPM: 142.7
Min nTPM: 130.3
Sample A
Male
142.7
Sample B
Male
130.6
Sample C
Female
141.3
Sample D
Female
130.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.