We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE4B is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
40.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
25.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
24.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
23.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
21.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
18.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
18.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
18.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
18.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
16.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
15.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
15.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
14.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
14.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
14.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
14.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
13.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
12.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
12.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
11.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
10.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
9.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
8.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
8.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
8.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
8.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
7.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
7.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
5.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
5.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
5.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
5.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
5.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
5.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
4.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
4.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
4.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
3.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
3.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
3.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
2.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE4B is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
231
Samples
Sample
Description
TPM
DO45267
0 years, male, NA, stage:3, dead, 570 days
21.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
18.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
14.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
14.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
13.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
12.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
11.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
10.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
9.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
8.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
8.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
7.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
6.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
6.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
6.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
6.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
5.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
5.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
5.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
4.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
4.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
3.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
3.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
3.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
3.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
3.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
2.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
1.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
1.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
231
Tumor
1.0
313
Tumor
0.8
573
Tumor
0.8
367
Tumor
0.7
533
Tumor
0.7
283
Tumor
0.7
257
Tumor
0.7
1027
Tumor
0.7
663
Tumor
0.6
525
Tumor
0.6
123
Tumor
0.6
451
Tumor
0.6
685
Tumor
0.6
571
Tumor
0.6
925
Tumor
0.6
965
Tumor
0.5
937
Tumor
0.5
567
Tumor
0.5
463
Tumor
0.5
487
Tumor
0.5
557
Tumor
0.5
491
Tumor
0.5
477
Tumor
0.5
171
Tumor
0.5
473
Tumor
0.4
435
Tumor
0.4
953
Tumor
0.4
915
Tumor
0.4
443
Tumor
0.4
513
Tumor
0.4
724
Normal
0.4
1041
Tumor
0.4
112
Tumor
0.4
267
Tumor
0.4
727
Tumor
0.4
343
Tumor
0.4
223
Tumor
0.4
1015
Tumor
0.3
865
Tumor
0.3
923
Tumor
0.3
813
Tumor
0.3
387
Tumor
0.3
465
Tumor
0.3
425
Tumor
0.3
427
Tumor
0.3
187
Tumor
0.3
635
Tumor
0.3
967
Tumor
0.3
185
Tumor
0.3
375
Tumor
0.3
125
Tumor
0.3
277
Tumor
0.3
493
Tumor
0.3
883
Tumor
0.3
1021
Tumor
0.2
341
Tumor
0.2
537
Tumor
0.2
127
Tumor
0.2
161
Tumor
0.2
423
Tumor
0.2
135
Tumor
0.2
943
Tumor
0.2
385
Tumor
0.2
814
Normal
0.2
527
Tumor
0.2
661
Tumor
0.2
741
Tumor
0.2
977
Tumor
0.2
737
Tumor
0.2
357
Tumor
0.2
433
Tumor
0.1
497
Tumor
0.1
391
Tumor
0.1
361
Tumor
0.1
211
Tumor
0.1
951
Tumor
0.1
113
Tumor
0.1
755
Tumor
0.1
413
Tumor
0.1
743
Tumor
0.1
823
Tumor
0.1
777
Tumor
0.1
545
Tumor
0.1
383
Tumor
0.1
1013
Tumor
0.1
332
Normal
0.1
615
Tumor
0.1
665
Tumor
0.0
1042
Normal
0.0
395
Tumor
0.0
1026
Normal
0.0
314
Normal
0.0
353
Tumor
0.0
365
Tumor
0.0
384
Normal
0.0
563
Tumor
0.0
285
Tumor
0.0
447
Tumor
0.0
483
Tumor
0.0
124
Normal
0.0
414
Normal
0.0
515
Tumor
0.0
146
Normal
0.0
431
Tumor
0.0
697
Tumor
0.0
261
Tumor
0.0
188
Normal
0.0
867
Tumor
0.0
131
Tumor
0.0
426
Normal
0.0
467
Tumor
0.0
695
Tumor
0.0
745
Tumor
0.0
642
Normal
0.0
564
Normal
0.0
141
Tumor
0.0
877
Tumor
0.0
422
Normal
0.0
421
Tumor
0.0
428
Normal
0.0
331
Tumor
0.0
574
Normal
0.0
368
Normal
0.0
1045
Tumor
0.0
1032
Normal
0.0
1022
Normal
-0.1
424
Normal
-0.1
126
Normal
-0.1
388
Normal
-0.1
186
Normal
-0.1
983
Tumor
-0.1
386
Normal
-0.1
137
Tumor
-0.1
785
Tumor
-0.1
568
Normal
-0.1
448
Normal
-0.1
136
Normal
-0.1
1046
Normal
-0.1
147
Tumor
-0.1
713
Tumor
-0.1
558
Normal
-0.1
444
Normal
-0.1
478
Normal
-0.1
554
Normal
-0.1
721
Tumor
-0.1
132
Normal
-0.1
298
Normal
-0.1
145
Tumor
-0.1
138
Normal
-0.1
392
Normal
-0.1
128
Normal
-0.1
351
Tumor
-0.1
114
Normal
-0.1
662
Normal
-0.1
873
Tumor
-0.1
394
Normal
-0.1
232
Normal
-0.1
536
Normal
-0.1
572
Normal
-0.1
815
Tumor
-0.1
327
Tumor
-0.1
456
Normal
-0.1
278
Normal
-0.1
466
Normal
-0.1
851
Tumor
-0.1
111
Normal
-0.1
488
Normal
-0.1
213
Tumor
-0.1
912
Normal
-0.1
1028
Normal
-0.1
366
Normal
-0.1
432
Normal
-0.1
436
Normal
-0.1
698
Normal
-0.1
268
Normal
-0.1
957
Tumor
-0.1
191
Tumor
-0.1
262
Normal
-0.1
461
Tumor
-0.1
452
Normal
-0.1
468
Normal
-0.1
1044
Normal
-0.1
464
Normal
-0.1
627
Tumor
-0.1
728
Normal
-0.1
434
Normal
-0.1
312
Normal
-0.1
396
Normal
-0.1
148
Normal
-0.1
481
Tumor
-0.1
517
Tumor
-0.1
358
Normal
-0.2
742
Normal
-0.2
981
Tumor
-0.2
648
Normal
-0.2
162
Normal
-0.2
647
Tumor
-0.2
918
Normal
-0.2
526
Normal
-0.2
618
Normal
-0.2
362
Normal
-0.2
744
Normal
-0.2
672
Normal
-0.2
393
Tumor
-0.2
462
Normal
-0.2
963
Tumor
-0.2
921
Tumor
-0.2
864
Normal
-0.2
723
Tumor
-0.2
355
Tumor
-0.2
914
Normal
-0.2
376
Normal
-0.2
258
Normal
-0.2
964
Normal
-0.2
516
Normal
-0.2
968
Normal
-0.2
1025
Tumor
-0.2
976
Normal
-0.2
922
Normal
-0.2
738
Normal
-0.2
446
Normal
-0.2
492
Normal
-0.2
926
Normal
-0.2
538
Normal
-0.2
474
Normal
-0.2
297
Tumor
-0.2
535
Tumor
-0.2
866
Normal
-0.2
938
Normal
-0.2
494
Normal
-0.2
472
Normal
-0.2
671
Tumor
-0.2
212
Normal
-0.2
524
Normal
-0.2
228
Normal
-0.2
224
Normal
-0.2
142
Normal
-0.2
352
Normal
-0.2
696
Normal
-0.2
344
Normal
-0.2
916
Normal
-0.2
756
Normal
-0.2
954
Normal
-0.2
272
Normal
-0.2
666
Normal
-0.2
498
Normal
-0.2
868
Normal
-0.2
484
Normal
-0.2
913
Tumor
-0.2
641
Tumor
-0.2
857
Tumor
-0.2
172
Normal
-0.2
924
Normal
-0.2
455
Tumor
-0.2
863
Tumor
-0.2
311
Tumor
-0.2
221
Tumor
-0.2
192
Normal
-0.2
874
Normal
-0.2
286
Normal
-0.2
917
Tumor
-0.2
482
Normal
-0.2
636
Normal
-0.2
518
Normal
-0.2
412
Normal
-0.2
342
Normal
-0.2
528
Normal
-0.3
956
Normal
-0.3
354
Normal
-0.3
271
Tumor
-0.3
966
Normal
-0.3
218
Normal
-0.3
196
Normal
-0.3
546
Normal
-0.3
284
Normal
-0.3
817
Tumor
-0.3
881
Tumor
-0.3
471
Tumor
-0.3
534
Normal
-0.3
722
Normal
-0.3
862
Normal
-0.3
445
Tumor
-0.3
628
Normal
-0.3
553
Tumor
-0.3
664
Normal
-0.3
195
Tumor
-0.3
686
Normal
-0.3
955
Tumor
-0.3
944
Normal
-0.3
217
Tumor
-0.3
982
Normal
-0.3
1016
Normal
-0.3
952
Normal
-0.3
911
Tumor
-0.3
1031
Tumor
-0.3
716
Normal
-0.3
878
Normal
-0.3
858
Normal
-0.3
958
Normal
-0.3
978
Normal
-0.3
861
Tumor
-0.3
214
Normal
-0.3
882
Normal
-0.3
884
Normal
-0.3
356
Normal
-0.3
778
Normal
-0.3
816
Normal
-0.3
222
Normal
-0.3
984
Normal
-0.3
852
Normal
-0.4
714
Normal
-0.4
363
Tumor
-0.4
975
Tumor
-0.4
818
Normal
-0.4
786
Normal
-0.4
715
Tumor
-0.4
1014
Normal
-0.4
523
Tumor
-0.4
411
Tumor
-0.4
746
Normal
-0.4
616
Normal
-0.4
514
Normal
-0.4
1043
Tumor
-0.4
328
Normal
-0.4
416
Normal
-0.4
415
Tumor
-0.5
824
Normal
-0.5
364
Normal
-0.5
227
Tumor
-0.5
617
Tumor
-0.5
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
