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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANGPTL6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
17.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
5.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
5.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
4.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
4.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
4.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
3.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
3.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
3.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
3.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
3.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
3.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
2.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
2.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
2.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
2.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
2.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
2.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
0.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
0.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
0.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
0.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
0.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
0.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
0.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
0.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
0.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
0.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
0.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
0.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
0.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
0.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
0.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
0.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
0.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
0.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
0.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
0.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
0.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
0.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
0.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANGPTL6 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
231
Samples
Sample
Description
TPM
DO50845
0 years, male, NA, stage:3, alive, 210 days
99.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
79.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
76.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
71.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
69.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
67.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
58.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
52.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
52.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
47.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
41.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
41.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
39.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
38.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
38.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
38.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
37.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
37.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
36.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
36.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
35.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
33.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
33.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
33.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
32.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
32.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
32.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
32.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
31.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
31.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
30.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
29.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
29.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
29.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
29.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
28.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
28.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
28.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
27.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
27.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
26.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
26.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
25.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
25.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
25.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
25.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
25.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
25.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
24.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
24.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
24.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
24.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
23.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
23.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
23.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
23.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
23.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
23.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
22.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
22.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
22.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
22.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
21.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
21.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
21.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
21.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
21.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
21.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
20.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
20.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
20.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
20.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
20.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
20.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
20.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
19.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
18.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
18.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
18.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
18.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
18.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
18.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
18.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
18.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
18.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
17.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
17.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
17.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
17.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
16.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
16.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
16.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
16.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
16.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
15.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
15.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
14.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
14.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
13.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
13.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
13.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
11.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
11.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
10.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
10.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
7.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
7.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
7.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
7.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
4.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
1.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
192
Normal
2.3
958
Normal
1.8
1044
Normal
1.7
976
Normal
1.7
126
Normal
1.6
478
Normal
1.3
146
Normal
1.2
1032
Normal
1.2
384
Normal
1.1
914
Normal
1.1
874
Normal
1.0
224
Normal
1.0
354
Normal
1.0
386
Normal
1.0
268
Normal
1.0
818
Normal
1.0
416
Normal
1.0
124
Normal
1.0
816
Normal
1.0
918
Normal
0.9
524
Normal
0.9
666
Normal
0.9
862
Normal
0.9
272
Normal
0.9
298
Normal
0.9
723
Tumor
0.9
1026
Normal
0.9
332
Normal
0.8
138
Normal
0.8
742
Normal
0.8
616
Normal
0.8
558
Normal
0.8
388
Normal
0.8
352
Normal
0.8
366
Normal
0.8
312
Normal
0.8
422
Normal
0.8
362
Normal
0.8
574
Normal
0.8
228
Normal
0.8
642
Normal
0.8
968
Normal
0.8
232
Normal
0.8
434
Normal
0.8
938
Normal
0.8
744
Normal
0.8
218
Normal
0.8
132
Normal
0.8
956
Normal
0.8
922
Normal
0.7
424
Normal
0.7
884
Normal
0.7
498
Normal
0.7
186
Normal
0.7
536
Normal
0.7
516
Normal
0.7
472
Normal
0.7
1042
Normal
0.7
136
Normal
0.7
672
Normal
0.7
342
Normal
0.7
415
Tumor
0.7
964
Normal
0.7
414
Normal
0.7
1022
Normal
0.6
148
Normal
0.6
954
Normal
0.6
1046
Normal
0.6
628
Normal
0.6
428
Normal
0.6
444
Normal
0.6
212
Normal
0.6
214
Normal
0.6
262
Normal
0.6
1028
Normal
0.6
188
Normal
0.6
394
Normal
0.6
448
Normal
0.6
716
Normal
0.6
882
Normal
0.6
698
Normal
0.6
111
Normal
0.6
636
Normal
0.6
868
Normal
0.5
618
Normal
0.5
746
Normal
0.5
468
Normal
0.5
546
Normal
0.5
412
Normal
0.5
284
Normal
0.5
978
Normal
0.5
278
Normal
0.5
864
Normal
0.5
664
Normal
0.5
924
Normal
0.5
344
Normal
0.5
572
Normal
0.5
852
Normal
0.5
984
Normal
0.5
396
Normal
0.5
912
Normal
0.5
426
Normal
0.5
466
Normal
0.5
916
Normal
0.5
456
Normal
0.4
286
Normal
0.4
328
Normal
0.4
756
Normal
0.4
564
Normal
0.4
944
Normal
0.4
128
Normal
0.4
258
Normal
0.4
568
Normal
0.4
492
Normal
0.4
462
Normal
0.4
368
Normal
0.4
1014
Normal
0.4
662
Normal
0.3
484
Normal
0.3
185
Tumor
0.3
982
Normal
0.3
824
Normal
0.3
196
Normal
0.3
686
Normal
0.3
926
Normal
0.3
538
Normal
0.3
866
Normal
0.3
952
Normal
0.3
494
Normal
0.3
534
Normal
0.3
432
Normal
0.2
738
Normal
0.2
446
Normal
0.2
114
Normal
0.2
464
Normal
0.2
364
Normal
0.2
488
Normal
0.2
314
Normal
0.2
648
Normal
0.2
778
Normal
0.2
217
Tumor
0.2
786
Normal
0.2
222
Normal
0.2
356
Normal
0.2
172
Normal
0.1
436
Normal
0.1
392
Normal
0.1
943
Tumor
0.1
528
Normal
0.1
514
Normal
0.1
518
Normal
0.1
376
Normal
0.1
142
Normal
0.1
814
Normal
0.1
162
Normal
0.1
878
Normal
0.1
358
Normal
0.1
482
Normal
0.1
452
Normal
0.1
696
Normal
0.0
722
Normal
0.0
554
Normal
0.0
474
Normal
0.0
858
Normal
0.0
728
Normal
-0.1
526
Normal
-0.1
714
Normal
-0.1
966
Normal
-0.1
421
Tumor
-0.2
785
Tumor
-0.3
917
Tumor
-0.3
1016
Normal
-0.3
955
Tumor
-0.3
1045
Tumor
-0.3
447
Tumor
-0.4
491
Tumor
-0.4
563
Tumor
-0.4
461
Tumor
-0.4
195
Tumor
-0.4
881
Tumor
-0.5
383
Tumor
-0.5
481
Tumor
-0.5
615
Tumor
-0.5
823
Tumor
-0.6
975
Tumor
-0.6
365
Tumor
-0.6
867
Tumor
-0.7
413
Tumor
-0.7
391
Tumor
-0.7
745
Tumor
-0.7
221
Tumor
-0.7
857
Tumor
-0.7
515
Tumor
-0.7
145
Tumor
-0.7
191
Tumor
-0.8
721
Tumor
-0.8
963
Tumor
-0.8
513
Tumor
-0.8
213
Tumor
-0.8
817
Tumor
-0.8
617
Tumor
-0.8
137
Tumor
-0.8
813
Tumor
-0.9
361
Tumor
-0.9
627
Tumor
-0.9
423
Tumor
-0.9
127
Tumor
-0.9
327
Tumor
-0.9
297
Tumor
-0.9
112
Tumor
-0.9
427
Tumor
-1.0
477
Tumor
-1.0
873
Tumor
-1.0
863
Tumor
-1.0
393
Tumor
-1.0
455
Tumor
-1.0
433
Tumor
-1.0
525
Tumor
-1.0
113
Tumor
-1.0
311
Tumor
-1.0
353
Tumor
-1.0
697
Tumor
-1.1
395
Tumor
-1.1
187
Tumor
-1.1
125
Tumor
-1.1
271
Tumor
-1.1
331
Tumor
-1.1
641
Tumor
-1.1
913
Tumor
-1.1
223
Tumor
-1.1
553
Tumor
-1.1
211
Tumor
-1.1
877
Tumor
-1.1
981
Tumor
-1.1
467
Tumor
-1.1
387
Tumor
-1.1
483
Tumor
-1.1
883
Tumor
-1.2
921
Tumor
-1.2
161
Tumor
-1.2
227
Tumor
-1.2
425
Tumor
-1.2
545
Tumor
-1.2
517
Tumor
-1.2
375
Tumor
-1.2
713
Tumor
-1.2
493
Tumor
-1.2
283
Tumor
-1.3
261
Tumor
-1.3
473
Tumor
-1.3
341
Tumor
-1.3
497
Tumor
-1.3
141
Tumor
-1.3
983
Tumor
-1.3
355
Tumor
-1.3
571
Tumor
-1.3
523
Tumor
-1.3
343
Tumor
-1.3
1015
Tumor
-1.3
277
Tumor
-1.3
911
Tumor
-1.3
285
Tumor
-1.3
431
Tumor
-1.3
861
Tumor
-1.3
865
Tumor
-1.4
267
Tumor
-1.4
435
Tumor
-1.4
367
Tumor
-1.4
915
Tumor
-1.4
573
Tumor
-1.4
135
Tumor
-1.4
671
Tumor
-1.4
1041
Tumor
-1.4
777
Tumor
-1.4
953
Tumor
-1.4
487
Tumor
-1.4
385
Tumor
-1.5
923
Tumor
-1.5
937
Tumor
-1.5
351
Tumor
-1.5
123
Tumor
-1.5
313
Tumor
-1.5
471
Tumor
-1.5
685
Tumor
-1.5
567
Tumor
-1.5
1027
Tumor
-1.5
967
Tumor
-1.5
357
Tumor
-1.5
724
Normal
-1.5
925
Tumor
-1.5
737
Tumor
-1.5
727
Tumor
-1.5
1025
Tumor
-1.5
363
Tumor
-1.5
445
Tumor
-1.6
443
Tumor
-1.6
715
Tumor
-1.6
451
Tumor
-1.6
755
Tumor
-1.6
171
Tumor
-1.6
665
Tumor
-1.6
1013
Tumor
-1.6
463
Tumor
-1.6
147
Tumor
-1.6
557
Tumor
-1.6
647
Tumor
-1.6
977
Tumor
-1.6
741
Tumor
-1.6
231
Tumor
-1.7
695
Tumor
-1.7
635
Tumor
-1.7
965
Tumor
-1.7
411
Tumor
-1.7
1031
Tumor
-1.7
465
Tumor
-1.8
1043
Tumor
-1.8
815
Tumor
-1.8
663
Tumor
-1.8
851
Tumor
-1.8
257
Tumor
-1.9
535
Tumor
-1.9
957
Tumor
-1.9
131
Tumor
-1.9
661
Tumor
-1.9
1021
Tumor
-1.9
527
Tumor
-1.9
951
Tumor
-2.0
537
Tumor
-2.0
743
Tumor
-2.1
533
Tumor
-2.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.