HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:114.8 nTPM
HPA Brain:72.6 nTPM
GTEx:114.8 nTPM
FANTOM5:53.5 Scaled Tags Per Million
Pig:34.4 nTPM
Mouse:26.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044004
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 61.3
2621 Female, age 67, right hemisphere 68.7
1898 Male, age 80, left hemisphere 67.4
2529 Female, age 94, left hemisphere 64.4
1855 Male, age 76, left hemisphere 60.1
1911 Female, age 85, right hemisphere 53.7
2148 Female, age 91, left hemisphere 53.4
Dentate gyrus
nTPM: 62.8
2530 Female, age 94, left hemisphere 72.9
2010 Male, age 76, both hemispheres 68.4
1927 Female, age 91, both hemispheres 65.3
2246 Female, age 85, both hemispheres 62.4
2531 Female, age 67, both hemispheres 56.2
2528 Male, age 74, both hemispheres 51.6
Entorhinal gyrus
nTPM: 68.6
2764 Male, age 80, right hemisphere 80.4
1938 Female, age 85, left hemisphere 76.1
1787 Male, age 76, left hemisphere 74.5
2613 Female, age 94, left hemisphere 69.0
2117 Female, age 91, right hemisphere 61.6
2686 Male, age 75, right hemisphere 49.9
Hippocampus, CA1
nTPM: 67.0
2749 Male, age 80, left hemisphere 90.2
2045 Male, age 76, both hemispheres 62.8
2082 Female, age 91, right hemisphere 61.4
2527 Male, age 74, both hemispheres 60.9
1873 Female, age 85, both hemispheres 59.8
Hippocampus, CA2
nTPM: 61.1
1963 Male, age 80, left hemisphere 68.6
1892 Male, age 76, both hemispheres 64.0
2437 Female, age 94, left hemisphere 60.2
2113 Female, age 91, right hemisphere 60.0
1940 Female, age 85, left hemisphere 57.7
2249 Male, age 74, both hemispheres 56.3
Hippocampus, CA3
nTPM: 63.5
2137 Male, age 80, left hemisphere 77.1
2620 Female, age 94, left hemisphere 69.3
1867 Male, age 76, both hemispheres 64.1
2436 Male, age 74, both hemispheres 60.3
2861 Female, age 67, both hemispheres 60.0
1891 Female, age 85, both hemispheres 50.2
Parahippocampal cortex
nTPM: 59.6
1933 Female, age 85, both hemispheres 67.0
2532 Female, age 72, left hemisphere 66.3
2245 Female, age 91, both hemispheres 66.0
1990 Female, age 91, right hemisphere 62.8
2250 Female, age 67, right hemisphere 61.9
2018 Male, age 76, both hemispheres 61.8
1850 Male, age 80, both hemispheres 59.6
2622 Female, age 67, right hemisphere 54.8
2692 Male, age 74, both hemispheres 48.7
2693 Female, age 94, both hemispheres 47.5
Perirhinal gyrus
nTPM: 72.6
1847 Female, age 91, left hemisphere 84.5
1794 Male, age 80, right hemisphere 83.9
1841 Female, age 85, right hemisphere 75.0
2848 Male, age 76, right hemisphere 61.0
2521 Female, age 94, right hemisphere 58.6
Subiculum
nTPM: 54.5
1977 Female, age 85, both hemispheres 70.6
1901 Male, age 80, both hemispheres 60.5
2619 Male, age 74, both hemispheres 58.1
2042 Male, age 76, both hemispheres 50.0
2438 Female, age 94, left hemisphere 44.0
2729 Female, age 91, right hemisphere 43.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 114.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.8
Samples: 197

Max nTPM: 297.7
Min nTPM: 28.8
Std nTPM: 42.3
Median nTPM: 109.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 297.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 258.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 224.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 223.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 210.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 202.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 198.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 195.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 194.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 180.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.5
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 34.4
Pig sample Sample description nTPM
Subiculum
nTPM: 33.1
Samples: 4

Max nTPM: 42.5
Min nTPM: 28.3
Sample A Female 42.5
Sample B Female 30.5
Sample C Male 30.9
Sample D Male 28.3
Dorsal hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 23.2
Sample A Female 46.2
Sample B Female 35.0
Sample C Male 33.3
Sample D Male 23.2
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 37.8
Min nTPM: 23.3
Sample A Female 32.6
Sample B Female 33.6
Sample C Male 37.8
Sample D Male 23.3
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 39.8
Min nTPM: 21.6
Sample A Female 31.7
Sample B Female 21.6
Sample C Male 39.8
Sample D Male 36.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 26.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 26.3
Min nTPM: 18.5
Sample A Male 21.6
Sample B Male 23.4
Sample C Female 26.3
Sample D Female 18.5
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 32.4
Min nTPM: 24.1
Sample A Male 26.2
Sample B Male 24.8
Sample C Female 24.1
Sample D Female 32.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74581002 Antisense, RP_060215_02_D01, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org