HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:34.3 nTPM
HPA Brain:19.7 nTPM
GTEx:34.3 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:37.7 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050969
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
2529 Female, age 94, left hemisphere 22.1
1898 Male, age 80, left hemisphere 20.8
2148 Female, age 91, left hemisphere 19.2
1911 Female, age 85, right hemisphere 17.9
2621 Female, age 67, right hemisphere 15.4
1855 Male, age 76, left hemisphere 14.6
Dentate gyrus
nTPM: 17.1
2530 Female, age 94, left hemisphere 22.8
2528 Male, age 74, both hemispheres 17.3
1927 Female, age 91, both hemispheres 16.2
2246 Female, age 85, both hemispheres 15.6
2531 Female, age 67, both hemispheres 15.5
2010 Male, age 76, both hemispheres 15.1
Entorhinal gyrus
nTPM: 19.7
2117 Female, age 91, right hemisphere 22.3
1938 Female, age 85, left hemisphere 21.6
2764 Male, age 80, right hemisphere 20.0
1787 Male, age 76, left hemisphere 18.8
2686 Male, age 75, right hemisphere 18.5
2613 Female, age 94, left hemisphere 17.1
Hippocampus, CA1
nTPM: 16.3
2082 Female, age 91, right hemisphere 17.5
2749 Male, age 80, left hemisphere 16.8
2527 Male, age 74, both hemispheres 16.6
1873 Female, age 85, both hemispheres 16.0
2045 Male, age 76, both hemispheres 14.7
Hippocampus, CA2
nTPM: 18.1
1963 Male, age 80, left hemisphere 20.1
1940 Female, age 85, left hemisphere 18.9
2113 Female, age 91, right hemisphere 18.6
2437 Female, age 94, left hemisphere 17.4
1892 Male, age 76, both hemispheres 16.8
2249 Male, age 74, both hemispheres 16.6
Hippocampus, CA3
nTPM: 17.6
2861 Female, age 67, both hemispheres 19.8
2137 Male, age 80, left hemisphere 19.1
1867 Male, age 76, both hemispheres 18.4
1891 Female, age 85, both hemispheres 18.2
2620 Female, age 94, left hemisphere 15.4
2436 Male, age 74, both hemispheres 14.9
Parahippocampal cortex
nTPM: 17.1
1850 Male, age 80, both hemispheres 19.3
1933 Female, age 85, both hemispheres 18.5
1990 Female, age 91, right hemisphere 18.3
2692 Male, age 74, both hemispheres 17.7
2532 Female, age 72, left hemisphere 17.5
2245 Female, age 91, both hemispheres 17.4
2622 Female, age 67, right hemisphere 16.7
2693 Female, age 94, both hemispheres 16.3
2250 Female, age 67, right hemisphere 15.1
2018 Male, age 76, both hemispheres 14.6
Perirhinal gyrus
nTPM: 18.2
1794 Male, age 80, right hemisphere 20.9
2848 Male, age 76, right hemisphere 19.2
1847 Female, age 91, left hemisphere 17.9
1841 Female, age 85, right hemisphere 16.9
2521 Female, age 94, right hemisphere 16.0
Subiculum
nTPM: 17.9
1901 Male, age 80, both hemispheres 19.4
1977 Female, age 85, both hemispheres 19.1
2729 Female, age 91, right hemisphere 18.5
2438 Female, age 94, left hemisphere 17.4
2619 Male, age 74, both hemispheres 17.1
2042 Male, age 76, both hemispheres 16.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.3
Samples: 197

Max nTPM: 60.9
Min nTPM: 17.8
Std nTPM: 8.2
Median nTPM: 33.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 60.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 60.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 57.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 56.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 56.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 56.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 52.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 52.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 52.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 51.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10153-102I9 76 years, female 14.6
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.7
Pig sample Sample description nTPM
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 29.7
Min nTPM: 17.1
Sample A Female 29.7
Sample B Female 19.1
Sample C Male 20.7
Sample D Male 17.1
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 26.7
Min nTPM: 13.6
Sample A Female 26.7
Sample B Female 21.3
Sample C Male 19.8
Sample D Male 13.6
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 17.9
Sample A Female 22.1
Sample B Female 20.7
Sample C Male 29.9
Sample D Male 17.9
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.0
Sample A Female 21.0
Sample B Female 16.0
Sample C Male 28.2
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.0
Samples: 4

Max nTPM: 36.4
Min nTPM: 32.7
Sample A Male 32.7
Sample B Male 34.2
Sample C Female 36.4
Sample D Female 32.8
Hippocampal formation
nTPM: 37.7
Samples: 4

Max nTPM: 40.4
Min nTPM: 35.2
Sample A Male 40.4
Sample B Male 35.2
Sample C Female 36.4
Sample D Female 38.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
293666 Antisense, RP_040604_02_H05, Mouse strain C57BL/6J (56 days, male) 11.9
74357606 Antisense, RP_060119_03_A08, Mouse strain C57BL/6J (56 days, male) 3.7

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