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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
62.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
48.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
36.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
31.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
31.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
29.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
28.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
25.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
23.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
21.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
17.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
132.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
95.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
65.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
61.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
52.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
52.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
49.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
49.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
47.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
46.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
45.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
44.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
44.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
43.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
43.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
43.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
42.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
42.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
42.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
42.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
40.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
39.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
38.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
37.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
37.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
36.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
36.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
36.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
34.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
33.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
33.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
33.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
32.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
32.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
32.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
31.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
31.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
29.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
28.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
27.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
27.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
26.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
24.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
24.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
24.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
23.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
23.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
19.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
17.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
16.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
16.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
12.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
11.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
6.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
5.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
5.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
4.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
3.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
0.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
108.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
81.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
71.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
69.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
65.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
63.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
61.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
60.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
54.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
53.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
51.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
50.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
50.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
48.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
47.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
44.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
41.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
38.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
37.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
37.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
37.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
37.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
28.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
25.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
21.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
12.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
8.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
7.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
6.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
4.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMA5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
150.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
147.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
110.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
98.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
87.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
84.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
79.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
76.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
74.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
73.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
71.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
69.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
67.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
66.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
64.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
59.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
59.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
57.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
55.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
55.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
51.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
50.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
50.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
50.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
48.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
48.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
46.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
45.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
42.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
41.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
41.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
40.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
39.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
37.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
36.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
35.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
35.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
34.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
33.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
31.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
29.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
28.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
28.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
27.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
27.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
25.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
25.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
24.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
24.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
22.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
21.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
21.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
20.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
20.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
6.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
4.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
4.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
1.6
CPT0012370003
Tumor
1.0
CPT0077490003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0000780007
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0088630003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0077320001
Normal
0.5
CPT0011240003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0025880003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0079480003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0079230003
Tumor
0.4
CPT0025060001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0012900004
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0015910003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0001350001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0025920001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0014130001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0000890001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0078530001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0015810003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0014470001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0018250001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0023710001
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0065930003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0001500009
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0086360003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0078660003
Tumor
-0.6
CPT0012280003
Tumor
-0.6
CPT0069160003
Tumor
-0.7
CPT0020120003
Tumor
-0.7
CPT0001180009
Tumor
-0.7
CPT0015730003
Tumor
-0.7
CPT0081880003
Tumor
-0.9
CPT0076330003
Tumor
-0.9
CPT0001340003
Tumor
-1.0
CPT0012180003
Tumor
-1.1
CPT0088550004
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.