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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAK4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
94.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
265.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
209.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
200.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
191.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
187.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
181.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
175.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
161.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
159.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
156.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
146.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
141.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
135.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
133.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
131.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
128.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
117.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
113.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
110.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
110.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
107.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
101.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
100.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
99.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
98.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
98.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
96.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
88.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
87.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
85.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
83.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
82.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
81.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
79.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
73.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
73.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
69.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
68.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
67.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
66.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
66.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
64.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
63.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
62.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
60.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
60.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
56.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
54.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
53.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
52.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
51.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
51.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
51.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
50.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
47.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
47.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
42.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
40.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
39.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
38.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAK4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
62.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
59.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
59.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
57.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
57.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
51.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
51.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
50.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
48.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
47.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
47.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
47.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
46.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
46.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
46.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
45.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
45.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
45.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
44.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
43.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
43.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
43.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
43.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
43.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
42.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
42.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
42.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
41.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
41.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
40.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
40.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
39.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
39.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
39.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
39.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
38.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
38.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
37.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
37.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
36.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
36.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
36.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
36.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
35.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
35.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
35.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
35.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
35.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
34.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
34.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
34.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
34.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
34.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
34.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
34.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
33.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
33.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
33.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
33.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
32.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
32.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
32.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
32.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
32.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
32.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
32.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
32.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
32.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
32.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
31.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
31.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
31.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
31.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
30.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
30.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
30.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
30.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
30.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
30.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
29.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
29.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
29.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
29.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
28.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
28.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
28.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
28.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
28.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
28.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
28.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
28.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
28.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
27.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
27.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
27.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
27.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
27.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
27.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
27.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
26.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
26.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
26.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
26.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
25.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
25.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
25.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
25.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
25.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
25.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
24.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
24.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
24.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
24.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
24.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
23.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
23.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
22.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
22.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
21.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
21.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
21.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
21.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
20.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
20.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
19.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
19.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
4.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAK4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
86.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
67.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
45.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
41.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
40.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
37.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
36.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
36.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
35.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
34.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
34.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
33.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
32.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
32.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
32.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
30.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
29.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
28.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
28.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
28.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
27.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
27.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
27.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
26.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
25.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
23.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
22.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
18.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAK4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
251.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
149.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
148.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
126.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
124.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
114.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
114.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
105.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
103.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
99.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
99.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
98.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
94.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
93.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
90.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
89.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
88.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
88.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
88.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
86.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
86.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
85.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
84.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
84.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
83.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
82.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
82.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
81.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
80.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
79.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
79.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
78.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
77.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
77.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
77.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
76.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
76.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
76.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
76.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
76.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
74.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
73.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
73.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
71.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
71.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
70.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
69.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
69.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
66.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
66.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
65.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
65.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
64.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
64.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
64.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
64.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
63.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
63.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
62.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
61.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
61.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
60.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
60.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
60.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
59.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
59.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
59.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
58.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
57.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
56.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
56.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
55.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
55.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
55.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
55.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
55.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
55.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
54.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
53.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
53.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
53.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
53.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
52.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
52.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
52.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
51.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
51.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
51.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
51.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
51.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
51.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
51.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
51.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
50.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
50.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
50.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
50.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
50.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
50.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
49.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
48.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
47.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
47.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
47.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
47.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
46.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
46.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
46.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
46.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
45.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
45.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
45.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
45.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
45.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
45.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
45.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
44.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
44.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
44.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
44.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
44.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
44.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
43.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
43.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
43.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
43.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
43.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
43.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
43.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
42.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
42.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
42.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
42.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
42.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
41.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
41.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
41.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
40.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
40.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
40.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
40.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
39.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
39.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
39.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
38.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
38.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
38.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
38.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
38.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
38.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
38.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
37.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
37.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
37.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
37.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
35.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
35.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
35.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
34.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
34.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
34.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
33.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
33.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
33.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
33.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
32.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
32.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
32.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
31.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
31.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
31.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
31.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
31.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
31.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
30.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
30.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
29.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
28.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
28.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
27.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
27.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
27.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
24.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
24.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
23.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
22.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
22.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
22.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
21.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.4
CPT0078660003
Tumor
0.8
CPT0001180009
Tumor
0.5
CPT0079300001
Normal
0.4
CPT0011410003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0001340003
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0066430001
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0014450004
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0019160001
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0079000001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0092800003
Normal
0.2
CPT0009020003
Normal
0.2
CPT0086370003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0063640001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0025610001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0006950001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0010120001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0088570001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0071150004
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0010110003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0079410003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0012180003
Tumor
-0.3
CPT0017850003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0088550004
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
