Expression of TNNT3 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TNNT3 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 15.5

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

53.0

Number of samples

492

Samples

Sample	Description	TPM
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	2237.2
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	1335.8
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	872.8
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	797.9
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	669.1
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	589.0
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	560.5
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	539.1
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	529.3
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	470.6
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	431.5
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	404.0
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	377.6
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	357.3
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	337.4
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	336.7
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	334.9
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	332.1
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	325.1
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	319.5
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	305.9
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	304.1
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	298.9
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	294.4
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	281.2
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	274.5
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	269.8
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	263.1
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	253.2
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	248.7
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	238.8
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	222.9
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	219.2
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	213.7
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	199.8
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	189.2
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	185.3
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	169.6
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	167.0
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	166.9
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	166.3
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	166.2
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	164.9
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	162.0
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	160.3
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	157.8
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	157.2
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	157.1
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	153.9
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	146.4
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	146.3
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	146.1
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	145.2
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	137.4
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	137.3
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	130.0
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	127.1
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	126.3
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	124.8
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	112.9
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	111.6
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	110.0
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	109.4
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	108.9
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	108.8
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	108.5
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	107.0
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	101.7
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	98.1
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	98.1
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	97.4
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	96.4
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	95.2
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	94.5
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	94.0
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	92.0
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	90.9
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	87.1
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	87.0
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	83.2
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	82.4
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	80.5
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	79.9
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	79.6
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	77.9
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	73.6
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	73.4
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	71.7
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	67.0
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	66.8
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	65.3
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	63.0
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	60.7
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	57.7
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	56.4
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	55.5
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	54.3
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	53.3
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	53.2
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	52.4
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	50.1
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	49.6
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	48.6
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	48.4
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	47.4
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	47.2
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	46.4
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	45.4
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	43.8
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	43.7
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	43.3
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	43.2
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	43.2
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	42.6
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	42.0
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	41.8
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	41.3
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	41.2
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	41.0
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	40.3
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	40.2
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	39.8
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	38.2
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	38.1
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	37.1
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	36.6
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	36.6
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	36.3
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	33.5
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	32.3
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	31.4
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	31.1
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	30.5
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	29.7
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	27.2
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	27.1
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	26.5
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	26.3
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	25.8
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	25.5
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	24.7
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	24.5
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	24.5
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	24.5
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	22.9
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	22.3
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	22.0
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	21.9
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	21.2
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	21.1
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	20.7
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	20.7
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	20.3
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	20.2
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	20.0
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	19.8
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	19.7
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	19.5
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	19.3
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	19.1
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	18.8
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	18.4
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	18.3
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	18.3
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	18.2
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	18.0
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	17.5
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	16.8
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	16.7
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	16.3
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	16.1
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	15.9
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	15.1
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	14.4
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	13.7
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	13.3
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	13.2
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	13.1
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	12.3
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	11.5
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	11.1
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	10.8
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	10.7
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	10.7
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	10.5
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	10.5
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	10.4
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	10.2
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	10.1
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	10.0
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	10.0
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	9.9
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	9.6
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	9.6
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	9.4
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	9.3
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	9.3
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	8.7
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	8.6
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	8.1
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	7.9
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	7.7
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	7.5
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	7.4
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	7.3
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	7.3
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	7.3
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	7.2
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	7.2
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	7.1
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	6.9
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	6.9
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	6.4
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	6.2
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	5.9
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	5.8
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	5.7
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	5.7
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	5.6
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	5.5
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	5.5
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	5.4
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	5.3
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	5.3
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	5.3
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	5.3
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	5.2
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	5.1
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	5.0
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	4.9
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	4.8
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	4.8
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	4.8
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	4.7
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	4.6
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	4.6
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	4.4
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	4.3
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	4.3
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	4.2
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	4.2
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	4.1
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	4.1
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	4.1
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	4.1
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	4.0
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	3.8
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	3.8
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	3.7
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	3.7
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	3.6
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	3.5
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	3.4
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	3.3
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	3.3
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	3.3
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	3.2
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	3.2
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	3.2
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	3.0
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	3.0
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	2.9
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	2.8
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	2.7
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	2.7
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	2.7
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	2.6
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	2.6
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	2.6
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	2.6
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	2.6
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	2.6
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	2.5
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	2.5
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	2.4
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	2.4
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	2.3
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	2.3
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	2.2
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	2.2
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	2.2
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	2.1
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	2.1
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	2.0
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	2.0
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	1.9
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	1.9
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	1.9
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	1.9
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	1.9
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	1.8
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	1.8
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	1.8
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	1.7
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	1.7
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	1.7
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	1.7
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	1.6
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	1.6
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	1.6
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	1.6
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	1.5
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	1.5
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	1.5
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	1.5
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	1.5
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	1.3
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	1.3
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	1.3
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	1.3
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	1.3
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	1.3
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	1.3
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	1.2
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	1.2
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	1.2
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	1.2
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	1.2
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	1.1
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	1.1
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	1.1
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	1.1
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	1.1
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	1.1
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	1.1
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	1.1
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	1.1
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	1.1
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	1.0
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	1.0
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	1.0
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	1.0
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	1.0
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	1.0
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	0.9
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	0.9
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	0.9
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	0.9
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	0.9
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	0.9
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	0.8
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	0.8
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	0.8
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	0.8
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	0.8
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	0.8
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	0.8
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	0.8
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	0.7
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	0.7
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	0.7
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	0.7
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	0.7
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	0.7
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	0.6
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	0.6
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	0.6
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	0.6
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	0.6
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	0.6
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	0.6
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	0.6
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	0.6
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	0.5
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	0.5
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	0.5
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	0.5
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	0.5
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	0.5
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	0.5
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	0.5
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	0.5
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	0.5
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	0.5
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	0.5
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	0.5
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	0.5
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	0.5
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	0.5
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	0.5
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	0.4
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	0.4
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	0.4
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	0.4
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	0.4
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	0.4
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	0.4
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	0.4
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	0.4
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	0.4
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	0.4
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	0.4
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	0.4
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	0.4
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	0.3
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	0.3
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	0.3
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	0.3
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	0.3
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	0.3
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	0.3
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	0.3
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	0.3
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	0.3
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	0.3
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	0.3
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	0.3
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	0.3
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	0.3
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	0.3
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	0.2
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	0.2
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	0.2
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	0.2
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	0.2
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	0.2
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	0.2
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	0.2
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	0.2
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	0.2
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	0.2
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	0.2
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	0.2
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	0.2
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	0.2
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	0.2
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	0.2
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	0.2
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	0.2
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	0.2
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	0.2
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	0.2
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	0.2
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	0.2
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	0.2
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	0.2
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	0.2
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	0.2
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	0.2
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	0.2
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	0.2
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	0.2
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	0.2
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	0.2
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	0.1
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	0.1
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	0.1
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	0.1
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	0.1
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	0.1
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	0.1
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	0.1
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	0.1
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	0.1
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	0.1
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	0.1
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	0.1
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	0.1
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	0.1
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	0.1
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	0.1
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	0.1
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	0.1
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	0.1
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	0.1
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	0.1
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	0.1
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	0.1
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	0.1
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	0.1
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	0.1
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	0.1
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	0.1
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	0.0
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	0.0
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	0.0
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	0.0
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	0.0
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	0.0
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	0.0
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	0.0
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	0.0
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	0.0
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	0.0
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	0.0
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	0.0
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	0.0
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	0.0
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	0.0
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	0.0
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	0.0
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	0.0
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0195880003	Normal	3.1
CPT0199830003	Normal	3.0
CPT0195700003	Normal	2.9
CPT0245140003	Normal	2.7
CPT0169920003	Normal	2.6
CPT0196060003	Normal	2.6
CPT0223460003	Normal	2.5
CPT0245190003	Normal	2.5
CPT0199890003	Normal	2.4
CPT0242000004	Normal	2.3
CPT0163490003	Normal	2.3
CPT0013030003	Normal	2.2
CPT0163020003	Normal	2.2
CPT0177220003	Normal	2.2
C3N-01758-04	Normal	2.2
CPT0235920003	Normal	2.1
CPT0123280003	Normal	2.0
CPT0226450003	Normal	1.7
CPT0226090003	Normal	1.6
CPT0220620003	Normal	1.6
CPT0196040003	Tumor	1.6
CPT0226400003	Normal	1.6
CPT0226030003	Tumor	1.6
CPT0127050003	Tumor	1.3
CPT0245020003	Normal	1.2
C3N-04279-05	Normal	1.1
CPT0199710003	Normal	1.0
CPT0013250003	Normal	0.8
CPT0123190003	Normal	0.8
CPT0177200003	Tumor	0.5
CPT0199820003	Tumor	0.5
CPT0256560003	Tumor	0.5
CPT0237150003	Normal	0.4
CPT0169730003	Tumor	0.4
CPT0177390003	Tumor	0.4
CPT0244890004	Tumor	0.3
CPT0199880003	Tumor	0.3
CPT0024810003	Tumor	0.2
CPT0194420003	Tumor	0.2
CPT0123180003	Tumor	0.1
CPT0223450003	Tumor	0.0
CPT0163650003	Tumor	0.0
C3N-01859-04	Normal	-0.1
CPT0094280004	Tumor	-0.1
CPT0236640003	Normal	-0.1
CPT0226440003	Tumor	-0.2
CPT0246620003	Tumor	-0.2
CPT0194790003	Tumor	-0.2
CPT0207870004	Tumor	-0.5
CPT0245410003	Normal	-0.5
C3N-02693-06	Normal	-0.5
CPT0245010003	Tumor	-0.5
CPT0163250003	Normal	-0.6
CPT0195860003	Tumor	-0.6
CPT0220610003	Tumor	-0.6
CPT0163480003	Tumor	-0.6
CPT0169640003	Tumor	-0.6
CPT0245180003	Tumor	-0.8
CPT0094420004	Tumor	-0.9
CPT0194250003	Tumor	-0.9
CPT0177010003	Tumor	-0.9
CPT0163790003	Tumor	-1.0
CPT0095040003	Tumor	-1.1
CPT0013460003	Normal	-1.1
CPT0169890003	Tumor	-1.1
CPT0245730003	Tumor	-1.1
CPT0235470002	Normal	-1.1
CPT0013430003	Tumor	-1.1
CPT0235910003	Tumor	-1.2
CPT0163340003	Tumor	-1.2
CPT0241980004	Tumor	-1.2
CPT0245600003	Tumor	-1.2
CPT0226390003	Tumor	-1.3
CPT0237500003	Normal	-1.3
CPT0226340003	Tumor	-1.3
CPT0246540003	Tumor	-1.4
CPT0084630009	Tumor	-1.4
CPT0084650004	Normal	-1.4
CPT0244940004	Tumor	-1.4
CPT0235460003	Tumor	-1.4
CPT0248350003	Normal	-1.5
CPT0229220002	Normal	-1.5
CPT0123260003	Tumor	-1.5
CPT0088060004	Tumor	-1.5
C3N-04276-06	Normal	-1.5
CPT0245130003	Tumor	-1.5
CPT0195680003	Tumor	-1.6
CPT0245230004	Tumor	-1.6
CPT0226350003	Normal	-1.6
CPT0163800003	Normal	-1.6
CPT0222360003	Tumor	-1.6
CPT0245560003	Normal	-1.6
CPT0245060004	Tumor	-1.7
CPT0163600003	Tumor	-1.7
CPT0245300003	Tumor	-1.7
CPT0163720003	Normal	-1.7
CPT0245400003	Tumor	-1.8
C3N-01620-05	Normal	-1.8
CPT0163090003	Tumor	-1.8
CPT0008930003	Tumor	-1.8
CPT0278700002	Normal	-1.8
CPT0163740003	Tumor	-1.8
CPT0281470002	Normal	-1.9
CPT0163610003	Normal	-1.9
CPT0169740004	Normal	-1.9
CPT0248520003	Tumor	-1.9
CPT0223970003	Tumor	-1.9
CPT0088080003	Normal	-2.0
CPT0236620003	Tumor	-2.0
CPT0245500003	Tumor	-2.0
CPT0194800003	Normal	-2.0
CPT0245550003	Tumor	-2.1
CPT0088010003	Normal	-2.1
CPT0088430003	Normal	-2.1
CPT0222180003	Tumor	-2.1
CPT0245350003	Tumor	-2.1
CPT0087990003	Tumor	-2.1
CPT0194960003	Tumor	-2.1
CPT0088410003	Tumor	-2.2
CPT0008630003	Tumor	-2.2
CPT0245630003	Tumor	-2.2
CPT0163240003	Tumor	-2.2
CPT0177710003	Tumor	-2.2
CPT0176770003	Tumor	-2.2
CPT0243140004	Normal	-2.2
CPT0196210003	Tumor	-2.2
CPT0163860003	Normal	-2.2
CPT0094490004	Tumor	-2.2
CPT0246670003	Tumor	-2.2
CPT0236870003	Normal	-2.3
CPT0190860003	Normal	-2.3
C3N-04275-05	Normal	-2.3
CPT0245460003	Normal	-2.3
CPT0008960003	Normal	-2.3
CPT0261520003	Tumor	-2.3
CPT0222200003	Normal	-2.4
CPT0011290003	Tumor	-2.4
CPT0013210004	Tumor	-2.5
CPT0011320003	Normal	-2.5
CPT0226130003	Tumor	-2.5
C3N-00857-05	Normal	-2.5
CPT0184530003	Tumor	-2.5
CPT0237480004	Tumor	-2.6
CPT0163170003	Normal	-2.6
CPT0201860004	Normal	-2.6
CPT0190850003	Tumor	-2.6
CPT0248330003	Tumor	-2.6
CPT0236850004	Tumor	-2.7
CPT0013000004	Tumor	-2.7
CPT0163160003	Tumor	-2.7
CPT0243090003	Tumor	-2.7
CPT0237130004	Tumor	-2.8
CPT0226270003	Normal	-2.8
CPT0201830004	Tumor	-2.8
CPT0199700003	Tumor	-2.8
CPT0094350004	Tumor	-2.8
CPT0245680003	Tumor	-2.9
CPT0237620004	Tumor	-2.9
CPT0087820003	Tumor	-2.9
CPT0250310003	Tumor	-2.9
CPT0246590003	Tumor	-2.9
C3N-00295-05	Normal	-2.9
CPT0194260003	Normal	-3.1
CPT0163910003	Tumor	-3.1
CPT0163430003	Normal	-3.1
CPT0237640003	Normal	-3.2
CPT0163530003	Tumor	-3.2
CPT0163410003	Tumor	-3.2
CPT0245450003	Tumor	-3.3
CPT0163840003	Tumor	-3.3
CPT0226250004	Tumor	-3.4
CPT0162940003	Tumor	-3.4
CPT0162990004	Tumor	-3.4
CPT0162890003	Tumor	-3.5
CPT0094580003	Normal	-3.5
CPT0008520008	Tumor	-3.6
CPT0094560004	Tumor	-3.7
CPT0011130005	Tumor	-3.9
CPT0013130003	Tumor	-4.0
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA037810	Antibody HPA056909	Antibody CAB002451
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS