HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
RNA expressioni
Consensus:100.7 nTPM
HPA Brain:71.0 nTPM
GTEx:100.7 nTPM
FANTOM5:61.7 Scaled Tags Per Million
Pig:39.7 nTPM
Mouse:38.8 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040932
Glial cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 71.0
Sample id Sample description nTPM
Hippocampus
nTPM: 56.9
1898 Male, age 80, left hemisphere 77.2
1855 Male, age 76, left hemisphere 61.0
2621 Female, age 67, right hemisphere 55.0
2148 Female, age 91, left hemisphere 51.8
2529 Female, age 94, left hemisphere 51.3
1911 Female, age 85, right hemisphere 44.8
Dentate gyrus
nTPM: 56.4
2530 Female, age 94, left hemisphere 68.1
2010 Male, age 76, both hemispheres 64.9
1927 Female, age 91, both hemispheres 62.4
2246 Female, age 85, both hemispheres 53.0
2528 Male, age 74, both hemispheres 47.5
2531 Female, age 67, both hemispheres 42.5
Entorhinal gyrus
nTPM: 62.0
2764 Male, age 80, right hemisphere 73.4
1938 Female, age 85, left hemisphere 70.9
1787 Male, age 76, left hemisphere 63.4
2613 Female, age 94, left hemisphere 63.1
2117 Female, age 91, right hemisphere 56.5
2686 Male, age 75, right hemisphere 44.8
Hippocampus, CA1
nTPM: 61.6
2749 Male, age 80, left hemisphere 90.5
1873 Female, age 85, both hemispheres 62.6
2045 Male, age 76, both hemispheres 54.6
2527 Male, age 74, both hemispheres 52.3
2082 Female, age 91, right hemisphere 47.9
Hippocampus, CA2
nTPM: 61.1
1963 Male, age 80, left hemisphere 79.3
1892 Male, age 76, both hemispheres 79.2
2437 Female, age 94, left hemisphere 58.3
2249 Male, age 74, both hemispheres 55.2
1940 Female, age 85, left hemisphere 50.6
2113 Female, age 91, right hemisphere 44.3
Hippocampus, CA3
nTPM: 57.8
2137 Male, age 80, left hemisphere 66.5
2436 Male, age 74, both hemispheres 65.3
1867 Male, age 76, both hemispheres 61.8
2620 Female, age 94, left hemisphere 52.5
2861 Female, age 67, both hemispheres 52.3
1891 Female, age 85, both hemispheres 48.2
Parahippocampal cortex
nTPM: 56.9
1850 Male, age 80, both hemispheres 70.5
1933 Female, age 85, both hemispheres 68.2
1990 Female, age 91, right hemisphere 59.3
2692 Male, age 74, both hemispheres 56.8
2245 Female, age 91, both hemispheres 56.4
2018 Male, age 76, both hemispheres 56.2
2250 Female, age 67, right hemisphere 55.5
2532 Female, age 72, left hemisphere 53.5
2693 Female, age 94, both hemispheres 46.6
2622 Female, age 67, right hemisphere 45.9
Perirhinal gyrus
nTPM: 71.0
1847 Female, age 91, left hemisphere 88.5
1794 Male, age 80, right hemisphere 74.5
1841 Female, age 85, right hemisphere 68.8
2521 Female, age 94, right hemisphere 63.6
2848 Male, age 76, right hemisphere 59.5
Subiculum
nTPM: 51.2
1977 Female, age 85, both hemispheres 63.5
1901 Male, age 80, both hemispheres 60.4
2619 Male, age 74, both hemispheres 53.5
2042 Male, age 76, both hemispheres 45.7
2438 Female, age 94, left hemisphere 42.4
2729 Female, age 91, right hemisphere 42.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 100.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.7
Samples: 197

Max nTPM: 223.4
Min nTPM: 32.8
Std nTPM: 30.4
Median nTPM: 96.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 223.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 220.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 203.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 186.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 185.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 180.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 172.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 169.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 167.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 160.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 155.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 61.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.7
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 49.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.7
Pig sample Sample description nTPM
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 44.4
Min nTPM: 30.6
Sample A Female 44.4
Sample B Female 31.6
Sample C Male 33.9
Sample D Male 30.6
Dorsal hippocampus
nTPM: 39.6
Samples: 4

Max nTPM: 51.0
Min nTPM: 30.7
Sample A Female 51.0
Sample B Female 36.9
Sample C Male 39.9
Sample D Male 30.7
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 37.7
Min nTPM: 27.7
Sample A Female 37.7
Sample B Female 36.3
Sample C Male 34.6
Sample D Male 27.7
Ventral hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 46.6
Min nTPM: 28.4
Sample A Female 43.0
Sample B Female 28.4
Sample C Male 46.6
Sample D Male 39.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 38.6
Min nTPM: 33.5
Sample A Male 35.4
Sample B Male 38.6
Sample C Female 36.4
Sample D Female 33.5
Hippocampal formation
nTPM: 38.8
Samples: 4

Max nTPM: 43.0
Min nTPM: 35.3
Sample A Male 43.0
Sample B Male 35.3
Sample C Female 38.8
Sample D Female 38.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
68637844 Antisense, RP_050126_01_G02, Mouse strain C57BL/6J (56 days, male) 4.4

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