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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP1S is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
56.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
46.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
45.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
45.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
43.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
43.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
42.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
42.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
37.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
35.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
35.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
34.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
34.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
33.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
33.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
32.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
32.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
31.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
29.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
29.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
29.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
29.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
29.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
28.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
28.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
28.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
26.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
26.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
26.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
26.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
26.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
25.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
25.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
25.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
25.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
24.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
24.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
24.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
24.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
24.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
23.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
23.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
23.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
22.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
21.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
21.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
21.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
21.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
21.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
21.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
21.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
21.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
20.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
20.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
20.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
20.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
19.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
19.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
19.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
19.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
19.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
19.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
18.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
18.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
18.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
18.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
17.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
17.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
17.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
17.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
17.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
17.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
17.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
17.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
16.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
16.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
16.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
16.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
16.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
16.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
16.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
15.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
15.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
15.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
15.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
14.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
14.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
14.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
14.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
14.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
14.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
13.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
13.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
13.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
13.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
12.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
12.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
12.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
12.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
12.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
12.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
11.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
11.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
11.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
10.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
10.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
10.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
9.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
8.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
8.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
8.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
6.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
5.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
5.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP1S is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.3
Number of samples
231
Samples
Sample
Description
TPM
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
13.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
12.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
10.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
10.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
9.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
9.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
8.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
7.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
6.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
6.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
5.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
5.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
4.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
4.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
4.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
4.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
4.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
4.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
4.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
3.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
3.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
3.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
3.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
3.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
3.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
3.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
3.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
3.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
3.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
3.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
3.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
3.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
2.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
2.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
2.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
2.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
2.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
2.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
231
Tumor
0.7
123
Tumor
0.7
671
Tumor
0.6
131
Tumor
0.5
311
Tumor
0.5
881
Tumor
0.5
461
Tumor
0.5
285
Tumor
0.5
745
Tumor
0.4
697
Tumor
0.4
271
Tumor
0.4
277
Tumor
0.4
661
Tumor
0.4
391
Tumor
0.4
913
Tumor
0.4
431
Tumor
0.3
965
Tumor
0.3
375
Tumor
0.3
161
Tumor
0.3
141
Tumor
0.3
1015
Tumor
0.3
297
Tumor
0.3
536
Normal
0.3
785
Tumor
0.3
571
Tumor
0.3
383
Tumor
0.3
984
Normal
0.3
627
Tumor
0.3
434
Normal
0.3
395
Tumor
0.3
857
Tumor
0.3
171
Tumor
0.3
868
Normal
0.2
813
Tumor
0.2
727
Tumor
0.2
444
Normal
0.2
455
Tumor
0.2
192
Normal
0.2
911
Tumor
0.2
954
Normal
0.2
125
Tumor
0.2
977
Tumor
0.2
567
Tumor
0.2
416
Normal
0.2
415
Tumor
0.2
917
Tumor
0.2
952
Normal
0.2
1031
Tumor
0.2
365
Tumor
0.2
981
Tumor
0.2
327
Tumor
0.2
817
Tumor
0.2
283
Tumor
0.2
666
Normal
0.2
447
Tumor
0.2
344
Normal
0.2
863
Tumor
0.2
498
Normal
0.2
1028
Normal
0.2
967
Tumor
0.2
874
Normal
0.2
924
Normal
0.2
331
Tumor
0.2
1045
Tumor
0.2
478
Normal
0.2
672
Normal
0.2
445
Tumor
0.2
533
Tumor
0.2
878
Normal
0.1
824
Normal
0.1
862
Normal
0.1
852
Normal
0.1
916
Normal
0.1
818
Normal
0.1
524
Normal
0.1
867
Tumor
0.1
617
Tumor
0.1
471
Tumor
0.1
665
Tumor
0.1
664
Normal
0.1
384
Normal
0.1
882
Normal
0.1
944
Normal
0.1
628
Normal
0.1
615
Tumor
0.1
515
Tumor
0.1
467
Tumor
0.1
958
Normal
0.1
744
Normal
0.1
641
Tumor
0.1
741
Tumor
0.1
343
Tumor
0.1
385
Tumor
0.1
968
Normal
0.1
884
Normal
0.1
528
Normal
0.1
686
Normal
0.1
224
Normal
0.1
432
Normal
0.1
435
Tumor
0.1
866
Normal
0.1
914
Normal
0.1
1022
Normal
0.1
786
Normal
0.1
858
Normal
0.1
1014
Normal
0.1
211
Tumor
0.1
262
Normal
0.1
918
Normal
0.1
1044
Normal
0.1
1043
Tumor
0.1
955
Tumor
0.1
877
Tumor
0.1
1046
Normal
0.1
714
Normal
0.1
815
Tumor
0.1
662
Normal
0.1
616
Normal
0.1
212
Normal
0.1
778
Normal
0.1
545
Tumor
0.1
926
Normal
0.1
964
Normal
0.1
492
Normal
0.1
368
Normal
0.1
446
Normal
0.1
777
Tumor
0.1
966
Normal
0.1
1042
Normal
0.1
538
Normal
0.1
814
Normal
0.1
268
Normal
0.1
963
Tumor
0.1
396
Normal
0.1
1016
Normal
0.1
516
Normal
0.1
474
Normal
0.1
1032
Normal
0.1
975
Tumor
0.1
353
Tumor
0.1
376
Normal
0.1
823
Tumor
0.1
553
Tumor
0.1
525
Tumor
0.1
413
Tumor
0.1
386
Normal
0.1
648
Normal
0.1
572
Normal
0.1
912
Normal
0.1
518
Normal
0.1
923
Tumor
0.1
364
Normal
0.1
142
Normal
0.1
574
Normal
0.1
146
Normal
0.1
864
Normal
0.1
354
Normal
0.1
721
Tumor
0.1
737
Tumor
0.1
426
Normal
0.1
366
Normal
0.1
195
Tumor
0.1
448
Normal
0.1
558
Normal
0.1
284
Normal
0.1
491
Tumor
0.1
484
Normal
0.1
124
Normal
0.0
362
Normal
0.0
956
Normal
0.0
473
Tumor
0.0
488
Normal
0.0
456
Normal
0.0
698
Normal
0.0
464
Normal
0.0
716
Normal
0.0
695
Tumor
0.0
938
Normal
0.0
298
Normal
0.0
112
Tumor
0.0
332
Normal
0.0
436
Normal
0.0
342
Normal
0.0
816
Normal
0.0
278
Normal
0.0
618
Normal
0.0
272
Normal
0.0
943
Tumor
0.0
412
Normal
0.0
922
Normal
0.0
976
Normal
0.0
915
Tumor
0.0
546
Normal
0.0
983
Tumor
0.0
513
Tumor
0.0
312
Normal
0.0
1026
Normal
0.0
534
Normal
0.0
636
Normal
0.0
352
Normal
0.0
564
Normal
0.0
468
Normal
0.0
286
Normal
0.0
523
Tumor
0.0
494
Normal
0.0
137
Tumor
0.0
363
Tumor
0.0
452
Normal
0.0
883
Tumor
0.0
514
Normal
0.0
728
Normal
0.0
223
Tumor
0.0
258
Normal
0.0
428
Normal
0.0
472
Normal
0.0
361
Tumor
0.0
138
Normal
0.0
568
Normal
0.0
921
Tumor
0.0
261
Tumor
0.0
414
Normal
0.0
228
Normal
0.0
267
Tumor
0.0
463
Tumor
0.0
132
Normal
0.0
755
Tumor
0.0
462
Normal
0.0
328
Normal
0.0
696
Normal
0.0
232
Normal
0.0
422
Normal
0.0
425
Tumor
0.0
746
Normal
0.0
218
Normal
0.0
424
Normal
0.0
715
Tumor
0.0
865
Tumor
0.0
526
Normal
0.0
861
Tumor
0.0
982
Normal
0.0
481
Tumor
0.0
873
Tumor
0.0
663
Tumor
0.0
482
Normal
0.0
563
Tumor
0.0
148
Normal
0.0
1021
Tumor
0.0
356
Normal
0.0
554
Normal
0.0
642
Normal
0.0
466
Normal
0.0
493
Tumor
0.0
388
Normal
0.0
222
Normal
0.0
443
Tumor
0.0
392
Normal
0.0
742
Normal
0.0
1025
Tumor
0.0
978
Normal
0.0
423
Tumor
0.0
217
Tumor
0.0
188
Normal
0.0
851
Tumor
-0.1
114
Normal
-0.1
951
Tumor
-0.1
227
Tumor
-0.1
756
Normal
-0.1
393
Tumor
-0.1
314
Normal
-0.1
723
Tumor
-0.1
126
Normal
-0.1
738
Normal
-0.1
411
Tumor
-0.1
937
Tumor
-0.1
535
Tumor
-0.1
162
Normal
-0.1
433
Tumor
-0.1
358
Normal
-0.1
1041
Tumor
-0.1
483
Tumor
-0.1
722
Normal
-0.1
111
Normal
-0.1
451
Tumor
-0.1
427
Tumor
-0.1
196
Normal
-0.1
394
Normal
-0.1
186
Normal
-0.1
713
Tumor
-0.1
185
Tumor
-0.1
136
Normal
-0.1
724
Normal
-0.1
647
Tumor
-0.1
465
Tumor
-0.1
685
Tumor
-0.2
421
Tumor
-0.2
135
Tumor
-0.2
172
Normal
-0.2
221
Tumor
-0.2
497
Tumor
-0.2
925
Tumor
-0.2
145
Tumor
-0.2
573
Tumor
-0.2
537
Tumor
-0.2
187
Tumor
-0.2
557
Tumor
-0.2
357
Tumor
-0.2
527
Tumor
-0.2
477
Tumor
-0.2
214
Normal
-0.2
213
Tumor
-0.2
128
Normal
-0.2
743
Tumor
-0.2
487
Tumor
-0.3
367
Tumor
-0.3
313
Tumor
-0.3
1013
Tumor
-0.3
355
Tumor
-0.3
191
Tumor
-0.3
387
Tumor
-0.4
953
Tumor
-0.4
341
Tumor
-0.4
351
Tumor
-0.4
127
Tumor
-0.4
635
Tumor
-0.4
147
Tumor
-0.4
113
Tumor
-0.5
517
Tumor
-0.5
257
Tumor
-0.5
957
Tumor
-0.5
1027
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
