HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:12.6 nTPM
HPA Brain:90.0 nTPM
GTEx:12.6 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Pig:30.2 nTPM
Mouse:29.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030212Antibody HPA030213Antibody HPA030214Antibody HPA030215Antibody CAB013496
Glial cells LowNot detectedLowMediumNot detected
Neuronal cells LowMedium-Not detectedNot detected











HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 90.0
Sample id Sample description nTPM
Hippocampus
nTPM: 86.5
2529 Female, age 94, left hemisphere 101.5
2148 Female, age 91, left hemisphere 87.3
1911 Female, age 85, right hemisphere 85.4
2621 Female, age 67, right hemisphere 84.9
1898 Male, age 80, left hemisphere 83.9
1855 Male, age 76, left hemisphere 75.9
Dentate gyrus
nTPM: 89.4
2530 Female, age 94, left hemisphere 102.7
2010 Male, age 76, both hemispheres 99.3
2531 Female, age 67, both hemispheres 97.5
2246 Female, age 85, both hemispheres 89.8
2528 Male, age 74, both hemispheres 73.9
1927 Female, age 91, both hemispheres 73.2
Entorhinal gyrus
nTPM: 90.0
2686 Male, age 75, right hemisphere 103.7
2613 Female, age 94, left hemisphere 92.2
2764 Male, age 80, right hemisphere 91.3
1938 Female, age 85, left hemisphere 88.9
1787 Male, age 76, left hemisphere 82.6
2117 Female, age 91, right hemisphere 81.0
Hippocampus, CA1
nTPM: 82.7
1873 Female, age 85, both hemispheres 90.1
2045 Male, age 76, both hemispheres 85.5
2749 Male, age 80, left hemisphere 83.7
2527 Male, age 74, both hemispheres 79.0
2082 Female, age 91, right hemisphere 75.4
Hippocampus, CA2
nTPM: 75.6
1963 Male, age 80, left hemisphere 82.5
2113 Female, age 91, right hemisphere 80.6
2437 Female, age 94, left hemisphere 78.3
1940 Female, age 85, left hemisphere 74.7
2249 Male, age 74, both hemispheres 69.9
1892 Male, age 76, both hemispheres 67.8
Hippocampus, CA3
nTPM: 84.6
2861 Female, age 67, both hemispheres 108.5
2620 Female, age 94, left hemisphere 89.8
1891 Female, age 85, both hemispheres 82.2
1867 Male, age 76, both hemispheres 78.5
2137 Male, age 80, left hemisphere 74.7
2436 Male, age 74, both hemispheres 74.1
Parahippocampal cortex
nTPM: 86.8
2622 Female, age 67, right hemisphere 102.3
2018 Male, age 76, both hemispheres 93.4
2692 Male, age 74, both hemispheres 93.1
2532 Female, age 72, left hemisphere 90.0
2245 Female, age 91, both hemispheres 88.0
1850 Male, age 80, both hemispheres 86.8
1933 Female, age 85, both hemispheres 84.6
1990 Female, age 91, right hemisphere 83.8
2693 Female, age 94, both hemispheres 79.1
2250 Female, age 67, right hemisphere 66.9
Perirhinal gyrus
nTPM: 75.7
2848 Male, age 76, right hemisphere 81.6
2521 Female, age 94, right hemisphere 80.9
1794 Male, age 80, right hemisphere 79.3
1841 Female, age 85, right hemisphere 71.3
1847 Female, age 91, left hemisphere 65.3
Subiculum
nTPM: 85.4
2042 Male, age 76, both hemispheres 97.0
1977 Female, age 85, both hemispheres 89.0
2619 Male, age 74, both hemispheres 87.3
2438 Female, age 94, left hemisphere 85.0
2729 Female, age 91, right hemisphere 77.2
1901 Male, age 80, both hemispheres 77.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 27.8
Min nTPM: 4.6
Std nTPM: 3.8
Median nTPM: 11.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 27.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 23.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 22.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 21.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 20.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 20.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 19.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 19.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 18.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.3
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 28.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.2
Pig sample Sample description nTPM
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 39.2
Min nTPM: 25.5
Sample A Female 39.2
Sample B Female 26.7
Sample C Male 29.4
Sample D Male 25.5
Dorsal hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 27.6
Min nTPM: 17.7
Sample A Female 26.7
Sample B Female 24.2
Sample C Male 27.6
Sample D Male 17.7
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 29.4
Min nTPM: 25.2
Sample A Female 28.5
Sample B Female 25.2
Sample C Male 29.4
Sample D Male 26.0
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 38.5
Min nTPM: 22.7
Sample A Female 25.6
Sample B Female 22.7
Sample C Male 38.5
Sample D Male 26.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 35.6
Min nTPM: 27.4
Sample A Male 28.3
Sample B Male 27.4
Sample C Female 27.4
Sample D Female 35.6
Hippocampal formation
nTPM: 24.6
Samples: 4

Max nTPM: 29.1
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 28.1
Sample C Female 29.1
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
73423817 Antisense, RP_051019_03_A07, Mouse strain C57BL/6J (56 days, male) 2.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org