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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XPO7 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
88.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
36.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
33.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
24.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
24.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
23.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
22.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
21.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
19.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
19.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
18.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
18.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
18.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
18.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
16.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
15.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
15.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
15.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
14.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
14.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
13.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
11.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
10.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
9.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
8.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
8.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
8.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
8.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
6.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
6.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
6.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
6.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
6.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
6.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
5.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
5.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
5.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
5.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
4.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
4.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
4.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
3.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
3.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
3.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
3.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
3.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XPO7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.7
Number of samples
231
Samples
Sample
Description
TPM
DO45211
0 years, male, NA, stage:3, alive, 240 days
30.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
26.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
22.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
21.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
21.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
18.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
17.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
17.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
16.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
15.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
15.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
14.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
13.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
10.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
10.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
9.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
8.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
8.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
7.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
6.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
5.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
5.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
4.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
131
Tumor
0.7
1027
Tumor
0.7
663
Tumor
0.6
147
Tumor
0.6
745
Tumor
0.6
125
Tumor
0.5
877
Tumor
0.5
391
Tumor
0.5
465
Tumor
0.5
685
Tumor
0.5
113
Tumor
0.5
313
Tumor
0.4
435
Tumor
0.4
1013
Tumor
0.4
186
Normal
0.4
427
Tumor
0.4
192
Normal
0.3
393
Tumor
0.3
342
Normal
0.3
635
Tumor
0.3
257
Tumor
0.3
456
Normal
0.3
445
Tumor
0.3
191
Tumor
0.3
451
Tumor
0.3
464
Normal
0.3
851
Tumor
0.3
1026
Normal
0.3
924
Normal
0.3
123
Tumor
0.3
196
Normal
0.3
436
Normal
0.3
746
Normal
0.3
128
Normal
0.3
162
Normal
0.2
742
Normal
0.2
146
Normal
0.2
425
Tumor
0.2
484
Normal
0.2
951
Tumor
0.2
723
Tumor
0.2
617
Tumor
0.2
148
Normal
0.2
423
Tumor
0.2
426
Normal
0.2
314
Normal
0.2
882
Normal
0.2
424
Normal
0.2
466
Normal
0.2
434
Normal
0.2
422
Normal
0.2
124
Normal
0.2
665
Tumor
0.2
222
Normal
0.2
952
Normal
0.2
917
Tumor
0.2
567
Tumor
0.2
463
Tumor
0.2
517
Tumor
0.2
977
Tumor
0.2
664
Normal
0.2
957
Tumor
0.2
428
Normal
0.2
411
Tumor
0.2
111
Normal
0.2
468
Normal
0.2
414
Normal
0.2
141
Tumor
0.2
648
Normal
0.2
618
Normal
0.2
724
Normal
0.2
862
Normal
0.2
1022
Normal
0.2
778
Normal
0.2
546
Normal
0.2
666
Normal
0.2
114
Normal
0.2
661
Tumor
0.2
818
Normal
0.2
136
Normal
0.2
332
Normal
0.2
286
Normal
0.2
498
Normal
0.2
344
Normal
0.2
172
Normal
0.2
432
Normal
0.2
616
Normal
0.2
738
Normal
0.2
218
Normal
0.2
816
Normal
0.2
1043
Tumor
0.2
358
Normal
0.1
446
Normal
0.1
366
Normal
0.1
448
Normal
0.1
354
Normal
0.1
497
Tumor
0.1
756
Normal
0.1
352
Normal
0.1
662
Normal
0.1
188
Normal
0.1
328
Normal
0.1
394
Normal
0.1
528
Normal
0.1
884
Normal
0.1
472
Normal
0.1
368
Normal
0.1
376
Normal
0.1
214
Normal
0.1
416
Normal
0.1
142
Normal
0.1
1016
Normal
0.1
956
Normal
0.1
866
Normal
0.1
298
Normal
0.1
452
Normal
0.1
815
Tumor
0.1
132
Normal
0.1
982
Normal
0.1
386
Normal
0.1
232
Normal
0.1
966
Normal
0.1
518
Normal
0.1
493
Tumor
0.1
744
Normal
0.1
1046
Normal
0.1
356
Normal
0.1
874
Normal
0.1
362
Normal
0.1
698
Normal
0.1
488
Normal
0.1
343
Tumor
0.1
534
Normal
0.1
672
Normal
0.1
138
Normal
0.1
224
Normal
0.1
554
Normal
0.1
278
Normal
0.1
272
Normal
0.1
412
Normal
0.1
914
Normal
0.1
462
Normal
0.1
628
Normal
0.1
467
Tumor
0.1
126
Normal
0.1
824
Normal
0.1
743
Tumor
0.1
878
Normal
0.1
1042
Normal
0.1
1044
Normal
0.1
492
Normal
0.1
384
Normal
0.1
1028
Normal
0.1
312
Normal
0.1
858
Normal
0.1
642
Normal
0.1
327
Tumor
0.1
383
Tumor
0.1
392
Normal
0.1
714
Normal
0.1
513
Tumor
0.1
474
Normal
0.1
864
Normal
0.1
911
Tumor
0.1
491
Tumor
0.1
558
Normal
0.1
112
Tumor
0.1
912
Normal
0.1
868
Normal
0.1
364
Normal
0.1
574
Normal
0.1
447
Tumor
0.1
786
Normal
0.1
728
Normal
0.1
262
Normal
0.1
722
Normal
0.1
195
Tumor
0.1
944
Normal
0.1
494
Normal
0.1
482
Normal
0.1
258
Normal
0.1
636
Normal
0.0
1032
Normal
0.0
965
Tumor
0.0
444
Normal
0.0
228
Normal
0.0
813
Tumor
0.0
213
Tumor
0.0
564
Normal
0.0
568
Normal
0.0
217
Tumor
0.0
1014
Normal
0.0
527
Tumor
0.0
514
Normal
0.0
396
Normal
0.0
964
Normal
0.0
863
Tumor
0.0
955
Tumor
0.0
918
Normal
0.0
331
Tumor
0.0
212
Normal
0.0
943
Tumor
0.0
526
Normal
0.0
852
Normal
0.0
538
Normal
0.0
627
Tumor
0.0
545
Tumor
0.0
671
Tumor
0.0
922
Normal
0.0
938
Normal
0.0
388
Normal
0.0
572
Normal
0.0
523
Tumor
0.0
926
Normal
0.0
385
Tumor
0.0
686
Normal
0.0
696
Normal
0.0
814
Normal
0.0
277
Tumor
0.0
741
Tumor
0.0
268
Normal
0.0
284
Normal
0.0
536
Normal
0.0
953
Tumor
0.0
516
Normal
0.0
431
Tumor
0.0
716
Normal
0.0
984
Normal
0.0
415
Tumor
0.0
571
Tumor
0.0
983
Tumor
-0.1
915
Tumor
-0.1
478
Normal
-0.1
1015
Tumor
-0.1
211
Tumor
-0.1
727
Tumor
-0.1
375
Tumor
-0.1
968
Normal
-0.1
524
Normal
-0.1
881
Tumor
-0.1
737
Tumor
-0.1
976
Normal
-0.1
127
Tumor
-0.1
861
Tumor
-0.1
615
Tumor
-0.1
285
Tumor
-0.1
185
Tumor
-0.1
937
Tumor
-0.1
171
Tumor
-0.1
954
Normal
-0.1
978
Normal
-0.1
461
Tumor
-0.1
865
Tumor
-0.1
975
Tumor
-0.2
363
Tumor
-0.2
161
Tumor
-0.2
857
Tumor
-0.2
351
Tumor
-0.2
537
Tumor
-0.2
433
Tumor
-0.2
916
Normal
-0.2
311
Tumor
-0.2
357
Tumor
-0.2
187
Tumor
-0.2
1021
Tumor
-0.2
647
Tumor
-0.2
777
Tumor
-0.2
873
Tumor
-0.2
1045
Tumor
-0.2
487
Tumor
-0.2
958
Normal
-0.2
913
Tumor
-0.2
413
Tumor
-0.2
535
Tumor
-0.2
283
Tumor
-0.2
483
Tumor
-0.2
963
Tumor
-0.2
367
Tumor
-0.3
697
Tumor
-0.3
421
Tumor
-0.3
231
Tumor
-0.3
137
Tumor
-0.3
867
Tumor
-0.3
557
Tumor
-0.3
563
Tumor
-0.3
267
Tumor
-0.3
515
Tumor
-0.3
353
Tumor
-0.3
823
Tumor
-0.3
923
Tumor
-0.3
297
Tumor
-0.3
135
Tumor
-0.3
395
Tumor
-0.3
455
Tumor
-0.3
721
Tumor
-0.3
713
Tumor
-0.4
227
Tumor
-0.4
785
Tumor
-0.4
365
Tumor
-0.4
817
Tumor
-0.4
145
Tumor
-0.4
221
Tumor
-0.4
573
Tumor
-0.4
533
Tumor
-0.4
341
Tumor
-0.4
361
Tumor
-0.4
481
Tumor
-0.4
641
Tumor
-0.4
473
Tumor
-0.4
1031
Tumor
-0.4
715
Tumor
-0.4
387
Tumor
-0.4
223
Tumor
-0.5
271
Tumor
-0.5
883
Tumor
-0.5
261
Tumor
-0.5
925
Tumor
-0.6
553
Tumor
-0.6
1025
Tumor
-0.6
477
Tumor
-0.6
981
Tumor
-0.6
1041
Tumor
-0.6
355
Tumor
-0.6
525
Tumor
-0.7
695
Tumor
-0.7
921
Tumor
-0.7
755
Tumor
-0.7
443
Tumor
-0.8
471
Tumor
-0.8
967
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
