HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		52.092
RNA expressioni
Consensus:39.1 nTPM
HPA Brain:135.9 nTPM
GTEx:39.1 nTPM
FANTOM5:194.4 Scaled Tags Per Million
Pig:124.2 nTPM
Mouse:148.6 nTPM
Allen mouse:24.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050509
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA050509
Hippocampal formation mean intensity 52.092
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 23.665
Molecular layer of the dentate gyrus 26.551
Granular dentate gyrus 49.720
CA1 - oriens layer 18.189
CA1 - pyramidal layer 47.484
CA1 - radiatum layer 26.387
CA2 - oriens layer 15.020
CA2 - pyramidal layer 37.399
CA2 - radiatum layer 21.262
CA3 - oriens layer 21.555
CA3 - pyramidal layer 52.092
CA3 - radiatum layer 11.234
Stratum lucidum 41.117
Lacunosum moleculare 33.124
Subiculum 4.673

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 135.9
Sample id Sample description nTPM
Hippocampus
nTPM: 111.0
1898 Male, age 80, left hemisphere 135.2
1855 Male, age 76, left hemisphere 124.4
2621 Female, age 67, right hemisphere 116.1
2148 Female, age 91, left hemisphere 107.4
1911 Female, age 85, right hemisphere 97.0
2529 Female, age 94, left hemisphere 86.0
Dentate gyrus
nTPM: 117.1
1927 Female, age 91, both hemispheres 147.0
2531 Female, age 67, both hemispheres 143.0
2010 Male, age 76, both hemispheres 119.2
2530 Female, age 94, left hemisphere 101.2
2528 Male, age 74, both hemispheres 100.3
2246 Female, age 85, both hemispheres 91.7
Entorhinal gyrus
nTPM: 71.0
2613 Female, age 94, left hemisphere 89.3
2764 Male, age 80, right hemisphere 84.7
1787 Male, age 76, left hemisphere 80.7
2686 Male, age 75, right hemisphere 64.1
1938 Female, age 85, left hemisphere 58.9
2117 Female, age 91, right hemisphere 48.6
Hippocampus, CA1
nTPM: 126.5
2749 Male, age 80, left hemisphere 195.1
2045 Male, age 76, both hemispheres 143.8
1873 Female, age 85, both hemispheres 120.5
2527 Male, age 74, both hemispheres 95.4
2082 Female, age 91, right hemisphere 77.7
Hippocampus, CA2
nTPM: 101.3
1892 Male, age 76, both hemispheres 149.5
1963 Male, age 80, left hemisphere 119.2
2437 Female, age 94, left hemisphere 99.4
2249 Male, age 74, both hemispheres 95.5
2113 Female, age 91, right hemisphere 77.6
1940 Female, age 85, left hemisphere 66.4
Hippocampus, CA3
nTPM: 135.9
2137 Male, age 80, left hemisphere 196.5
2620 Female, age 94, left hemisphere 178.9
2861 Female, age 67, both hemispheres 131.1
1867 Male, age 76, both hemispheres 129.5
2436 Male, age 74, both hemispheres 90.4
1891 Female, age 85, both hemispheres 89.2
Parahippocampal cortex
nTPM: 83.0
2245 Female, age 91, both hemispheres 111.3
2693 Female, age 94, both hemispheres 107.9
2018 Male, age 76, both hemispheres 100.6
2250 Female, age 67, right hemisphere 89.9
1850 Male, age 80, both hemispheres 84.9
1933 Female, age 85, both hemispheres 75.9
2532 Female, age 72, left hemisphere 71.2
1990 Female, age 91, right hemisphere 69.9
2622 Female, age 67, right hemisphere 68.1
2692 Male, age 74, both hemispheres 49.9
Perirhinal gyrus
nTPM: 104.0
2521 Female, age 94, right hemisphere 125.7
1847 Female, age 91, left hemisphere 111.5
1794 Male, age 80, right hemisphere 110.4
1841 Female, age 85, right hemisphere 94.8
2848 Male, age 76, right hemisphere 77.7
Subiculum
nTPM: 86.3
1901 Male, age 80, both hemispheres 113.6
2729 Female, age 91, right hemisphere 89.6
2438 Female, age 94, left hemisphere 86.6
2042 Male, age 76, both hemispheres 86.5
1977 Female, age 85, both hemispheres 78.0
2619 Male, age 74, both hemispheres 63.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.1
Samples: 197

Max nTPM: 90.9
Min nTPM: 2.8
Std nTPM: 17.4
Median nTPM: 36.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 90.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 87.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 81.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 81.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 80.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 79.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 75.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 74.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 73.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 70.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 194.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 194.4
FF:10169-103B7 60 years, female 279.3
FF:10153-102I9 76 years, female 109.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 124.2
Pig sample Sample description nTPM
Subiculum
nTPM: 97.9
Samples: 4

Max nTPM: 125.7
Min nTPM: 84.3
Sample A Female 125.7
Sample B Female 84.3
Sample C Male 95.8
Sample D Male 85.8
Dorsal hippocampus
nTPM: 111.2
Samples: 4

Max nTPM: 127.3
Min nTPM: 92.8
Sample A Female 127.3
Sample B Female 119.7
Sample C Male 104.9
Sample D Male 92.8
Entorhinal cortex
nTPM: 124.3
Samples: 4

Max nTPM: 134.8
Min nTPM: 110.7
Sample A Female 134.8
Sample B Female 110.7
Sample C Male 129.0
Sample D Male 122.5
Ventral hippocampus
nTPM: 90.1
Samples: 4

Max nTPM: 127.1
Min nTPM: 67.4
Sample A Female 67.5
Sample B Female 67.4
Sample C Male 98.2
Sample D Male 127.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 148.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.8
Samples: 4

Max nTPM: 136.5
Min nTPM: 98.6
Sample A Male 114.1
Sample B Male 98.6
Sample C Female 122.0
Sample D Female 136.5
Hippocampal formation
nTPM: 148.7
Samples: 4

Max nTPM: 169.8
Min nTPM: 127.8
Sample A Male 127.8
Sample B Male 165.9
Sample C Female 169.8
Sample D Female 131.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.4
68797583 Antisense, RP_050210_02_F09, Mouse strain C57BL/6J (56 days, male) 25.4
75077203 Antisense, RP_060412_02_E06, Mouse strain C57BL/6J (56 days, male) 23.4

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