HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:90.5 nTPM
HPA Brain:91.0 nTPM
GTEx:90.5 nTPM
FANTOM5:153.9 Scaled Tags Per Million
Pig:69.5 nTPM
Mouse:68.4 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041940Antibody HPA043560Antibody CAB004465
Glial cells MediumLowMedium
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.0
Sample id Sample description nTPM
Hippocampus
nTPM: 91.0
2529 Female, age 94, left hemisphere 104.7
2621 Female, age 67, right hemisphere 102.6
2148 Female, age 91, left hemisphere 92.3
1911 Female, age 85, right hemisphere 84.6
1898 Male, age 80, left hemisphere 82.0
1855 Male, age 76, left hemisphere 80.2
Dentate gyrus
nTPM: 81.9
2530 Female, age 94, left hemisphere 103.4
2531 Female, age 67, both hemispheres 88.0
2010 Male, age 76, both hemispheres 79.6
2246 Female, age 85, both hemispheres 78.0
1927 Female, age 91, both hemispheres 71.6
2528 Male, age 74, both hemispheres 70.7
Entorhinal gyrus
nTPM: 90.9
2117 Female, age 91, right hemisphere 104.0
2686 Male, age 75, right hemisphere 92.2
2613 Female, age 94, left hemisphere 91.8
2764 Male, age 80, right hemisphere 91.7
1938 Female, age 85, left hemisphere 84.0
1787 Male, age 76, left hemisphere 81.5
Hippocampus, CA1
nTPM: 79.9
2527 Male, age 74, both hemispheres 83.9
2749 Male, age 80, left hemisphere 81.1
1873 Female, age 85, both hemispheres 79.8
2082 Female, age 91, right hemisphere 78.3
2045 Male, age 76, both hemispheres 76.3
Hippocampus, CA2
nTPM: 84.3
2437 Female, age 94, left hemisphere 96.8
1892 Male, age 76, both hemispheres 88.7
2113 Female, age 91, right hemisphere 83.5
1963 Male, age 80, left hemisphere 82.7
2249 Male, age 74, both hemispheres 77.6
1940 Female, age 85, left hemisphere 76.7
Hippocampus, CA3
nTPM: 86.9
2620 Female, age 94, left hemisphere 100.3
2861 Female, age 67, both hemispheres 92.2
2436 Male, age 74, both hemispheres 86.5
1867 Male, age 76, both hemispheres 85.8
1891 Female, age 85, both hemispheres 82.9
2137 Male, age 80, left hemisphere 73.4
Parahippocampal cortex
nTPM: 82.2
2245 Female, age 91, both hemispheres 98.2
2692 Male, age 74, both hemispheres 91.8
2532 Female, age 72, left hemisphere 91.5
2622 Female, age 67, right hemisphere 83.4
1990 Female, age 91, right hemisphere 82.6
1850 Male, age 80, both hemispheres 78.1
1933 Female, age 85, both hemispheres 76.4
2018 Male, age 76, both hemispheres 75.0
2250 Female, age 67, right hemisphere 74.2
2693 Female, age 94, both hemispheres 71.1
Perirhinal gyrus
nTPM: 75.3
1847 Female, age 91, left hemisphere 82.7
1794 Male, age 80, right hemisphere 78.6
2521 Female, age 94, right hemisphere 73.3
2848 Male, age 76, right hemisphere 72.5
1841 Female, age 85, right hemisphere 69.4
Subiculum
nTPM: 90.7
2042 Male, age 76, both hemispheres 104.9
2438 Female, age 94, left hemisphere 94.9
1901 Male, age 80, both hemispheres 93.2
2619 Male, age 74, both hemispheres 91.8
1977 Female, age 85, both hemispheres 83.0
2729 Female, age 91, right hemisphere 76.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 90.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.5
Samples: 197

Max nTPM: 187.4
Min nTPM: 46.1
Std nTPM: 18.9
Median nTPM: 87.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 187.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 153.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 153.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 141.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 141.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 134.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 130.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 127.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 124.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 121.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 121.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 153.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.9
FF:10153-102I9 76 years, female 157.3
FF:10169-103B7 60 years, female 150.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 69.5
Pig sample Sample description nTPM
Subiculum
nTPM: 53.4
Samples: 4

Max nTPM: 65.4
Min nTPM: 48.1
Sample A Female 65.4
Sample B Female 51.2
Sample C Male 49.0
Sample D Male 48.1
Dorsal hippocampus
nTPM: 69.6
Samples: 4

Max nTPM: 87.7
Min nTPM: 46.4
Sample A Female 87.7
Sample B Female 63.4
Sample C Male 80.7
Sample D Male 46.4
Entorhinal cortex
nTPM: 50.1
Samples: 4

Max nTPM: 52.0
Min nTPM: 45.8
Sample A Female 51.5
Sample B Female 52.0
Sample C Male 51.2
Sample D Male 45.8
Ventral hippocampus
nTPM: 62.3
Samples: 4

Max nTPM: 77.9
Min nTPM: 41.3
Sample A Female 60.4
Sample B Female 41.3
Sample C Male 77.9
Sample D Male 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 68.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.6
Samples: 4

Max nTPM: 60.9
Min nTPM: 58.0
Sample A Male 58.0
Sample B Male 59.0
Sample C Female 60.9
Sample D Female 60.4
Hippocampal formation
nTPM: 68.4
Samples: 4

Max nTPM: 73.7
Min nTPM: 62.5
Sample A Male 62.5
Sample B Male 66.3
Sample C Female 70.9
Sample D Female 73.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
67870479 Antisense, RP_041018_01_D12, Mouse strain C57BL/6J (56 days, male) 9.4
71664144 Antisense, RP_050927_04_G06, Mouse strain C57BL/6J (56 days, male) 7.3
77413682 Antisense, RP_070205_01_C08, Mouse strain C57BL/6J (56 days, male) 5.4

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