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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANGPTL8 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
155.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1913.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1806.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1720.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1165.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1107.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1062.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
931.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
894.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
854.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
854.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
776.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
757.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
756.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
740.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
633.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
597.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
593.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
575.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
568.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
564.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
555.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
551.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
548.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
543.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
520.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
516.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
504.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
503.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
494.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
457.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
455.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
455.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
440.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
429.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
426.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
411.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
409.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
399.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
398.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
388.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
384.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
369.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
348.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
341.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
341.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
337.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
324.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
316.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
312.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
311.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
311.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
310.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
310.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
308.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
307.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
302.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
295.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
288.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
275.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
274.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
268.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
268.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
267.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
265.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
256.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
245.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
242.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
239.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
239.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
234.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
229.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
225.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
223.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
223.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
221.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
221.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
217.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
210.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
205.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
204.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
195.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
190.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
188.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
181.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
181.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
177.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
176.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
173.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
170.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
170.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
170.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
170.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
164.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
164.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
162.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
161.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
160.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
160.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
159.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
159.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
158.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
157.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
156.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
155.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
155.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
154.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
153.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
152.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
149.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
144.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
143.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
141.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
140.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
140.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
131.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
129.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
129.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
129.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
128.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
127.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
125.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
125.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
124.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
120.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
120.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
119.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
117.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
114.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
113.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
111.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
109.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
108.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
108.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
108.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
106.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
105.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
105.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
103.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
102.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
101.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
100.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
98.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
96.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
95.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
94.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
94.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
92.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
92.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
90.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
89.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
89.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
89.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
88.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
88.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
86.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
86.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
85.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
85.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
83.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
83.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
82.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
78.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
77.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
76.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
76.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
75.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
74.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
73.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
72.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
70.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
69.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
68.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
68.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
68.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
67.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
67.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
66.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
65.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
65.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
65.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
65.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
64.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
64.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
64.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
61.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
61.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
60.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
60.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
59.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
57.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
57.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
57.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
56.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
56.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
55.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
54.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
53.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
52.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
52.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
52.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
52.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
52.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
51.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
51.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
50.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
50.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
49.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
49.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
49.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
48.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
47.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
47.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
47.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
47.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
47.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
46.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
46.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
46.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
46.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
45.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
45.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
44.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
43.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
43.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
43.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
42.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
42.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
42.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
42.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
42.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
41.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
41.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
40.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
38.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
38.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
38.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
38.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
38.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
38.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
36.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
35.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
35.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
35.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
35.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
34.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
34.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
33.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
33.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
32.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
32.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
32.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
31.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
31.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
31.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
31.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
30.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
29.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
29.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
29.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
29.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
29.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
28.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
28.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
27.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
26.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
26.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
26.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
25.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
25.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
24.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
24.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
23.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
23.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
23.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
23.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
23.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
22.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
22.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
21.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
21.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
20.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
20.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
20.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
20.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
20.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
19.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
18.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
18.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
18.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
17.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
17.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
17.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
16.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
15.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
14.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
14.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
14.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
13.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
13.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
11.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
11.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
11.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
5.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
2.3
863
Tumor
2.2
394
Normal
2.1
425
Tumor
2.0
131
Tumor
1.8
567
Tumor
1.6
125
Tumor
1.6
813
Tumor
1.4
375
Tumor
1.3
343
Tumor
1.3
877
Tumor
1.2
192
Normal
1.1
297
Tumor
1.1
663
Tumor
1.1
392
Normal
1.0
737
Tumor
1.0
271
Tumor
0.9
221
Tumor
0.9
393
Tumor
0.9
223
Tumor
0.9
921
Tumor
0.9
814
Normal
0.8
186
Normal
0.8
635
Tumor
0.8
1025
Tumor
0.8
862
Normal
0.8
471
Tumor
0.8
777
Tumor
0.8
452
Normal
0.7
124
Normal
0.7
1032
Normal
0.7
257
Tumor
0.7
515
Tumor
0.7
742
Normal
0.7
455
Tumor
0.6
881
Tumor
0.6
466
Normal
0.6
352
Normal
0.6
527
Tumor
0.6
745
Tumor
0.6
1044
Normal
0.6
386
Normal
0.6
172
Normal
0.6
461
Tumor
0.6
126
Normal
0.6
912
Normal
0.6
365
Tumor
0.5
342
Normal
0.5
421
Tumor
0.5
484
Normal
0.5
923
Tumor
0.5
298
Normal
0.5
218
Normal
0.5
617
Tumor
0.5
388
Normal
0.5
943
Tumor
0.5
268
Normal
0.5
922
Normal
0.5
187
Tumor
0.5
858
Normal
0.5
938
Normal
0.5
114
Normal
0.4
983
Tumor
0.4
984
Normal
0.4
391
Tumor
0.4
222
Normal
0.4
112
Tumor
0.4
573
Tumor
0.4
474
Normal
0.4
744
Normal
0.4
428
Normal
0.4
1042
Normal
0.4
574
Normal
0.4
487
Tumor
0.4
424
Normal
0.4
111
Normal
0.4
666
Normal
0.4
331
Tumor
0.4
672
Normal
0.4
217
Tumor
0.4
162
Normal
0.4
185
Tumor
0.4
627
Tumor
0.4
224
Normal
0.4
354
Normal
0.3
1045
Tumor
0.3
664
Normal
0.3
616
Normal
0.3
488
Normal
0.3
976
Normal
0.3
572
Normal
0.3
818
Normal
0.3
284
Normal
0.3
882
Normal
0.3
494
Normal
0.3
448
Normal
0.3
483
Tumor
0.3
558
Normal
0.3
447
Tumor
0.3
196
Normal
0.3
1022
Normal
0.2
815
Tumor
0.2
523
Tumor
0.2
141
Tumor
0.2
958
Normal
0.2
975
Tumor
0.2
641
Tumor
0.2
498
Normal
0.2
376
Normal
0.2
866
Normal
0.2
1014
Normal
0.2
147
Tumor
0.2
564
Normal
0.2
468
Normal
0.2
538
Normal
0.2
1026
Normal
0.2
884
Normal
0.2
874
Normal
0.2
868
Normal
0.2
914
Normal
0.2
534
Normal
0.2
526
Normal
0.2
314
Normal
0.2
258
Normal
0.2
517
Tumor
0.2
967
Tumor
0.2
212
Normal
0.2
648
Normal
0.1
446
Normal
0.1
978
Normal
0.1
277
Tumor
0.1
214
Normal
0.1
414
Normal
0.1
368
Normal
0.1
982
Normal
0.1
716
Normal
0.1
492
Normal
0.1
228
Normal
0.1
396
Normal
0.1
422
Normal
0.1
537
Tumor
0.1
358
Normal
0.1
128
Normal
0.1
384
Normal
0.1
146
Normal
0.1
514
Normal
0.1
456
Normal
0.1
272
Normal
0.1
563
Tumor
0.1
662
Normal
0.1
213
Tumor
0.1
465
Tumor
0.1
436
Normal
0.1
464
Normal
0.1
262
Normal
0.1
528
Normal
0.1
545
Tumor
0.1
723
Tumor
0.1
722
Normal
0.0
444
Normal
0.0
746
Normal
0.0
123
Tumor
0.0
1016
Normal
0.0
516
Normal
0.0
518
Normal
0.0
443
Tumor
0.0
413
Tumor
0.0
312
Normal
0.0
698
Normal
0.0
524
Normal
0.0
426
Normal
0.0
628
Normal
0.0
113
Tumor
0.0
1046
Normal
0.0
916
Normal
0.0
387
Tumor
0.0
636
Normal
0.0
142
Normal
0.0
738
Normal
0.0
642
Normal
0.0
232
Normal
0.0
852
Normal
0.0
286
Normal
0.0
553
Tumor
0.0
135
Tumor
-0.1
977
Tumor
-0.1
432
Normal
-0.1
1028
Normal
-0.1
546
Normal
-0.1
918
Normal
-0.1
1043
Tumor
-0.1
285
Tumor
-0.1
714
Normal
-0.1
981
Tumor
-0.1
568
Normal
-0.1
513
Tumor
-0.1
138
Normal
-0.1
188
Normal
-0.1
533
Tumor
-0.1
132
Normal
-0.1
615
Tumor
-0.1
332
Normal
-0.1
536
Normal
-0.1
462
Normal
-0.2
1027
Tumor
-0.2
968
Normal
-0.2
195
Tumor
-0.2
618
Normal
-0.2
823
Tumor
-0.2
344
Normal
-0.2
713
Tumor
-0.2
686
Normal
-0.2
148
Normal
-0.2
696
Normal
-0.2
824
Normal
-0.2
954
Normal
-0.2
278
Normal
-0.2
171
Tumor
-0.2
554
Normal
-0.2
964
Normal
-0.2
728
Normal
-0.2
778
Normal
-0.2
864
Normal
-0.2
944
Normal
-0.3
127
Tumor
-0.3
145
Tumor
-0.3
366
Normal
-0.3
924
Normal
-0.3
451
Tumor
-0.3
1015
Tumor
-0.3
191
Tumor
-0.3
926
Normal
-0.3
137
Tumor
-0.3
883
Tumor
-0.3
434
Normal
-0.3
755
Tumor
-0.3
913
Tumor
-0.3
741
Tumor
-0.3
786
Normal
-0.3
685
Tumor
-0.4
727
Tumor
-0.4
423
Tumor
-0.4
915
Tumor
-0.4
353
Tumor
-0.4
785
Tumor
-0.4
878
Normal
-0.4
463
Tumor
-0.4
435
Tumor
-0.4
283
Tumor
-0.4
1031
Tumor
-0.4
472
Normal
-0.4
525
Tumor
-0.4
357
Tumor
-0.4
756
Normal
-0.4
482
Normal
-0.4
955
Tumor
-0.5
416
Normal
-0.5
816
Normal
-0.5
966
Normal
-0.5
415
Tumor
-0.5
956
Normal
-0.5
227
Tumor
-0.5
412
Normal
-0.5
695
Tumor
-0.5
445
Tumor
-0.5
161
Tumor
-0.5
136
Normal
-0.5
957
Tumor
-0.5
571
Tumor
-0.5
431
Tumor
-0.5
267
Tumor
-0.5
311
Tumor
-0.5
328
Normal
-0.5
478
Normal
-0.5
493
Tumor
-0.5
433
Tumor
-0.6
1041
Tumor
-0.6
671
Tumor
-0.6
817
Tumor
-0.6
497
Tumor
-0.6
1021
Tumor
-0.6
721
Tumor
-0.6
362
Normal
-0.6
211
Tumor
-0.6
857
Tumor
-0.6
715
Tumor
-0.6
557
Tumor
-0.7
697
Tumor
-0.7
467
Tumor
-0.7
477
Tumor
-0.7
261
Tumor
-0.7
647
Tumor
-0.7
231
Tumor
-0.7
395
Tumor
-0.7
873
Tumor
-0.7
491
Tumor
-0.8
665
Tumor
-0.8
364
Normal
-0.8
363
Tumor
-0.8
356
Normal
-0.8
851
Tumor
-0.8
355
Tumor
-0.8
911
Tumor
-0.8
427
Tumor
-0.8
385
Tumor
-0.8
952
Normal
-0.8
865
Tumor
-0.8
917
Tumor
-0.9
953
Tumor
-0.9
367
Tumor
-0.9
327
Tumor
-1.0
341
Tumor
-1.0
313
Tumor
-1.0
411
Tumor
-1.0
535
Tumor
-1.0
1013
Tumor
-1.0
963
Tumor
-1.1
867
Tumor
-1.1
925
Tumor
-1.1
383
Tumor
-1.2
361
Tumor
-1.2
951
Tumor
-1.3
724
Normal
-1.3
965
Tumor
-1.3
661
Tumor
-1.4
861
Tumor
-1.4
351
Tumor
-1.7
937
Tumor
-1.9
481
Tumor
-2.0
473
Tumor
-2.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.