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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
190.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
94.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
91.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
85.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
85.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
82.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
82.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
80.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
78.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
71.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
71.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
71.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
70.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
68.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
65.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
64.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
63.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
62.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
61.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
61.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
60.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
58.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
58.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
57.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
55.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
55.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
54.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
52.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
51.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
49.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
48.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
48.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
46.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
46.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
45.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
44.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
44.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
43.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
43.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
39.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
39.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
39.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
38.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
37.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
36.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
35.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
35.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
33.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
33.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
30.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
27.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
27.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BP4 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
108.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
73.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
66.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
63.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
56.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
55.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
54.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
52.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
52.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
48.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
44.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
43.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
40.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
39.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
38.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
38.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
38.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
38.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
37.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
37.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
37.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
37.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
36.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
36.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
35.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
35.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
34.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
34.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
34.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
33.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
33.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
33.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
33.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
32.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
32.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
32.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
32.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
32.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
32.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
31.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
31.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
31.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
31.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
30.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
30.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
30.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
29.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
29.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
29.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
29.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
29.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
29.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
28.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
28.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
28.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
28.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
27.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
27.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
26.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
25.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
24.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
24.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
24.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
24.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
23.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
23.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
23.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
22.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
22.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
22.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
19.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
19.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
17.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
16.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
11.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
10.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
7.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
6.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
5.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
5.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
4.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
2.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BP4 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
62.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
54.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
33.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
28.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
26.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
26.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
12.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
10.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
5.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
4.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
3.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
3.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
3.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3BP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
119.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
91.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
49.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
41.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
40.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
37.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
32.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
26.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
24.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
24.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
16.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
13.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
13.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
12.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
11.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
10.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
10.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
10.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
10.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
10.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
9.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
7.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
7.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
7.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
7.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
7.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
6.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
6.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
6.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
5.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
5.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
5.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
5.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
4.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
4.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
4.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
4.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
4.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
3.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
3.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
3.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
2.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
2.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
2.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
2.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
1.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086030003
Tumor
1.6
CPT0071150004
Tumor
1.0
CPT0006440003
Tumor
0.9
CPT0088970003
Tumor
0.9
CPT0077110003
Tumor
0.9
CPT0079180003
Tumor
0.8
CPT0000780007
Tumor
0.8
CPT0006630003
Tumor
0.7
CPT0088760003
Tumor
0.7
CPT0078930003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0088900003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0009000003
Tumor
0.7
CPT0079300001
Normal
0.6
CPT0025350003
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0012370003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0086870003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0001230001
Normal
0.5
CPT0015810003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0063320003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0025580004
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0023690003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0025170003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0002370001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0001550001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0069010001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0012770003
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0089480003
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0010110003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0078530001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0025050003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0002350011
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0078840001
Normal
-0.4
CPT0009060003
Tumor
-0.4
CPT0092800003
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0086820003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0079410003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0015730003
Tumor
-0.6
CPT0012280003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0001180009
Tumor
-0.8
CPT0012180003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0065430003
Tumor
-0.9
CPT0002270011
Tumor
-0.9
CPT0023350003
Tumor
-1.1
CPT0078800003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
