We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LBP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
407.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3318.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2379.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2310.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2286.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1853.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1834.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1716.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1710.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1607.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1519.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1479.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1363.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1351.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1344.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1301.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1299.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1292.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1211.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1209.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1202.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1197.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1189.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1187.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1158.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1143.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1138.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1136.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1127.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1114.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1098.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1091.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1058.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1048.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1030.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
988.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
974.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
969.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
967.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
966.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
960.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
953.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
953.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
945.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
903.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
884.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
864.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
864.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
851.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
839.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
814.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
809.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
800.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
781.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
758.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
753.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
732.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
723.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
723.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
721.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
716.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
713.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
707.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
707.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
687.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
686.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
679.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
670.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
670.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
653.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
650.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
648.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
646.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
640.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
639.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
634.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
633.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
620.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
620.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
618.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
606.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
598.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
587.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
586.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
583.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
578.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
577.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
574.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
558.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
550.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
550.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
548.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
547.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
542.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
541.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
532.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
521.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
511.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
508.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
498.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
493.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
492.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
491.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
487.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
487.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
479.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
478.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
476.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
465.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
458.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
457.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
452.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
448.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
443.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
439.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
438.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
434.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
432.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
430.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
426.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
422.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
419.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
416.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
403.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
396.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
392.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
388.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
386.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
382.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
382.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
379.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
378.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
368.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
367.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
367.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
363.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
360.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
358.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
355.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
354.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
349.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
349.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
348.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
348.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
347.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
346.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
345.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
344.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
342.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
340.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
339.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
339.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
337.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
336.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
333.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
333.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
331.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
331.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
325.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
322.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
322.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
320.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
312.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
311.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
303.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
300.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
295.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
292.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
289.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
288.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
283.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
282.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
280.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
277.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
274.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
271.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
270.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
269.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
267.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
265.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
263.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
263.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
255.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
254.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
251.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
251.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
248.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
247.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
247.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
244.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
243.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
243.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
241.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
240.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
238.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
237.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
235.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
234.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
233.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
228.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
226.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
225.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
225.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
223.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
221.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
218.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
216.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
215.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
215.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
215.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
214.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
214.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
213.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
213.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
205.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
201.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
200.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
199.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
197.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
197.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
196.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
188.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
187.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
186.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
186.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
186.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
185.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
182.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
182.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
181.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
180.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
179.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
178.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
175.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
174.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
173.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
170.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
166.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
166.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
164.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
164.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
163.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
161.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
159.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
154.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
153.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
153.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
152.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
152.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
152.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
151.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
147.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
146.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
145.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
143.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
140.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
140.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
138.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
136.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
136.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
134.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
133.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
132.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
131.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
125.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
124.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
124.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
123.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
123.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
121.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
119.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
118.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
118.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
116.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
116.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
114.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
113.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
111.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
111.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
109.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
108.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
107.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
106.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
106.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
105.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
105.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
105.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
100.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
99.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
97.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
96.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
94.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
94.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
93.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
89.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
88.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
85.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
84.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
84.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
82.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
81.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
80.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
80.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
79.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
79.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
78.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
78.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
76.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
73.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
73.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
72.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
71.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
70.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
68.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
68.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
67.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
67.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
67.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
67.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
66.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
64.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
61.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
61.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
61.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
60.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
60.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
59.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
59.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
58.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
56.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
52.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
51.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
51.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
47.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
45.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
44.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
37.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
37.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
36.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
36.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
32.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
30.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
27.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
26.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
25.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
23.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
18.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
17.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
6.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
5.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LBP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
313.2
Number of samples
231
Samples
Sample
Description
TPM
DO50819
0 years, female, NA, stage:2, alive, 510 days
2144.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
1983.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1454.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1350.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
1311.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
1162.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
1086.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
1068.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1032.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1005.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1001.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
977.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
971.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
950.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
902.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
877.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
869.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
868.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
849.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
835.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
795.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
784.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
772.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
750.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
724.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
710.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
703.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
695.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
684.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
681.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
669.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
620.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
619.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
615.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
599.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
596.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
584.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
581.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
557.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
542.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
538.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
537.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
534.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
533.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
530.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
521.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
517.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
495.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
494.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
484.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
469.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
461.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
434.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
434.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
433.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
431.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
429.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
422.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
421.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
409.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
405.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
396.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
395.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
394.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
373.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
372.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
366.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
366.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
365.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
363.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
361.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
356.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
351.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
351.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
350.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
345.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
345.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
344.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
343.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
339.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
339.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
339.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
335.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
335.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
325.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
321.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
318.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
312.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
303.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
290.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
286.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
286.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
284.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
281.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
274.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
265.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
261.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
259.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
259.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
258.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
251.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
247.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
246.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
239.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
239.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
232.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
232.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
228.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
225.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
223.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
222.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
215.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
207.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
204.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
202.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
201.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
200.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
199.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
196.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
196.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
191.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
190.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
189.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
185.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
181.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
180.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
180.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
179.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
178.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
177.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
175.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
168.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
168.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
164.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
160.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
160.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
156.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
156.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
154.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
153.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
148.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
148.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
147.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
145.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
142.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
140.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
138.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
136.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
136.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
132.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
129.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
125.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
125.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
121.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
120.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
119.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
119.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
115.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
112.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
112.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
110.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
110.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
108.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
107.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
107.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
107.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
103.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
102.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
99.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
92.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
90.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
85.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
82.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
81.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
81.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
81.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
77.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
75.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
74.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
71.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
70.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
69.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
68.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
66.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
64.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
64.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
62.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
59.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
59.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
50.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
46.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
42.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
40.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
37.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
33.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
33.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
30.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
26.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
24.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
24.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
21.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
21.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
20.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
15.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
14.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
12.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
5.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
4.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
2.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
2.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
113
Tumor
1.9
223
Tumor
1.7
877
Tumor
1.7
395
Tumor
1.5
713
Tumor
1.5
557
Tumor
1.3
573
Tumor
1.3
187
Tumor
1.3
343
Tumor
1.2
525
Tumor
1.1
191
Tumor
1.1
375
Tumor
1.1
937
Tumor
1.1
145
Tumor
1.0
851
Tumor
1.0
467
Tumor
1.0
125
Tumor
1.0
425
Tumor
1.0
217
Tumor
1.0
387
Tumor
1.0
671
Tumor
0.9
195
Tumor
0.8
536
Normal
0.7
327
Tumor
0.7
396
Normal
0.7
1015
Tumor
0.7
218
Normal
0.7
257
Tumor
0.7
697
Tumor
0.6
665
Tumor
0.6
286
Normal
0.6
393
Tumor
0.5
745
Tumor
0.5
817
Tumor
0.5
135
Tumor
0.5
392
Normal
0.5
672
Normal
0.4
224
Normal
0.4
1021
Tumor
0.4
526
Normal
0.3
558
Normal
0.3
192
Normal
0.3
444
Normal
0.3
285
Tumor
0.3
391
Tumor
0.3
368
Normal
0.3
421
Tumor
0.3
344
Normal
0.3
497
Tumor
0.3
953
Tumor
0.3
981
Tumor
0.2
724
Normal
0.2
352
Normal
0.2
823
Tumor
0.2
498
Normal
0.2
642
Normal
0.2
574
Normal
0.2
446
Normal
0.2
228
Normal
0.2
523
Tumor
0.1
813
Tumor
0.1
535
Tumor
0.1
384
Normal
0.1
124
Normal
0.1
524
Normal
0.1
126
Normal
0.1
1025
Tumor
0.1
723
Tumor
0.1
451
Tumor
0.1
975
Tumor
0.1
112
Tumor
0.1
527
Tumor
0.1
545
Tumor
0.1
1044
Normal
0.1
641
Tumor
0.1
443
Tumor
0.1
221
Tumor
0.1
938
Normal
0.1
394
Normal
0.1
567
Tumor
0.1
636
Normal
0.0
422
Normal
0.0
568
Normal
0.0
563
Tumor
0.0
455
Tumor
0.0
141
Tumor
0.0
491
Tumor
0.0
353
Tumor
0.0
967
Tumor
0.0
686
Normal
0.0
261
Tumor
0.0
111
Normal
0.0
538
Normal
0.0
857
Tumor
0.0
883
Tumor
0.0
212
Normal
0.0
386
Normal
-0.1
471
Tumor
-0.1
635
Tumor
-0.1
376
Normal
-0.1
213
Tumor
-0.1
564
Normal
-0.1
728
Normal
-0.1
447
Tumor
-0.1
297
Tumor
-0.1
284
Normal
-0.1
816
Normal
-0.1
755
Tumor
-0.1
142
Normal
-0.1
528
Normal
-0.1
388
Normal
-0.1
537
Tumor
-0.1
196
Normal
-0.1
262
Normal
-0.1
1045
Tumor
-0.1
267
Tumor
-0.1
1026
Normal
-0.1
214
Normal
-0.1
185
Tumor
-0.1
572
Normal
-0.1
685
Tumor
-0.2
778
Normal
-0.2
311
Tumor
-0.2
383
Tumor
-0.2
283
Tumor
-0.2
514
Normal
-0.2
448
Normal
-0.2
385
Tumor
-0.2
1028
Normal
-0.2
222
Normal
-0.2
696
Normal
-0.2
721
Tumor
-0.2
1022
Normal
-0.2
452
Normal
-0.2
722
Normal
-0.2
232
Normal
-0.2
426
Normal
-0.2
367
Tumor
-0.2
978
Normal
-0.3
917
Tumor
-0.3
1043
Tumor
-0.3
727
Tumor
-0.3
465
Tumor
-0.3
468
Normal
-0.3
114
Normal
-0.3
615
Tumor
-0.3
571
Tumor
-0.3
361
Tumor
-0.3
943
Tumor
-0.3
466
Normal
-0.3
983
Tumor
-0.3
925
Tumor
-0.3
716
Normal
-0.3
954
Normal
-0.3
884
Normal
-0.3
227
Tumor
-0.3
137
Tumor
-0.3
414
Normal
-0.3
1016
Normal
-0.3
268
Normal
-0.3
332
Normal
-0.3
365
Tumor
-0.3
1027
Tumor
-0.3
662
Normal
-0.3
433
Tumor
-0.3
863
Tumor
-0.4
958
Normal
-0.4
984
Normal
-0.4
916
Normal
-0.4
616
Normal
-0.4
424
Normal
-0.4
666
Normal
-0.4
331
Tumor
-0.4
913
Tumor
-0.4
714
Normal
-0.4
148
Normal
-0.4
488
Normal
-0.4
434
Normal
-0.4
968
Normal
-0.4
926
Normal
-0.4
492
Normal
-0.4
423
Tumor
-0.4
146
Normal
-0.4
742
Normal
-0.4
982
Normal
-0.4
878
Normal
-0.4
881
Tumor
-0.4
918
Normal
-0.4
464
Normal
-0.4
914
Normal
-0.4
915
Tumor
-0.4
1046
Normal
-0.4
738
Normal
-0.4
428
Normal
-0.4
363
Tumor
-0.5
427
Tumor
-0.5
147
Tumor
-0.5
445
Tumor
-0.5
627
Tumor
-0.5
461
Tumor
-0.5
456
Normal
-0.5
138
Normal
-0.5
354
Normal
-0.5
648
Normal
-0.5
618
Normal
-0.5
328
Normal
-0.5
436
Normal
-0.5
277
Tumor
-0.5
513
Tumor
-0.5
366
Normal
-0.5
785
Tumor
-0.5
123
Tumor
-0.5
912
Normal
-0.5
861
Tumor
-0.5
952
Normal
-0.5
463
Tumor
-0.5
924
Normal
-0.5
162
Normal
-0.5
517
Tumor
-0.5
364
Normal
-0.5
756
Normal
-0.5
664
Normal
-0.5
744
Normal
-0.5
814
Normal
-0.5
647
Tumor
-0.5
188
Normal
-0.5
976
Normal
-0.5
862
Normal
-0.5
131
Tumor
-0.6
136
Normal
-0.6
186
Normal
-0.6
494
Normal
-0.6
858
Normal
-0.6
1041
Tumor
-0.6
882
Normal
-0.6
944
Normal
-0.6
258
Normal
-0.6
314
Normal
-0.6
815
Tumor
-0.6
715
Tumor
-0.6
161
Tumor
-0.6
478
Normal
-0.6
963
Tumor
-0.6
852
Normal
-0.6
956
Normal
-0.6
312
Normal
-0.6
487
Tumor
-0.6
741
Tumor
-0.6
628
Normal
-0.6
313
Tumor
-0.6
362
Normal
-0.6
554
Normal
-0.6
964
Normal
-0.6
874
Normal
-0.6
483
Tumor
-0.6
493
Tumor
-0.6
777
Tumor
-0.6
474
Normal
-0.7
957
Tumor
-0.7
786
Normal
-0.7
432
Normal
-0.7
132
Normal
-0.7
1014
Normal
-0.7
416
Normal
-0.7
818
Normal
-0.7
868
Normal
-0.7
482
Normal
-0.7
518
Normal
-0.7
866
Normal
-0.7
342
Normal
-0.7
355
Tumor
-0.7
341
Tumor
-0.7
358
Normal
-0.7
873
Tumor
-0.7
746
Normal
-0.7
663
Tumor
-0.7
415
Tumor
-0.7
966
Normal
-0.7
617
Tumor
-0.7
911
Tumor
-0.7
477
Tumor
-0.7
977
Tumor
-0.7
824
Normal
-0.7
698
Normal
-0.7
546
Normal
-0.7
922
Normal
-0.8
951
Tumor
-0.8
695
Tumor
-0.8
462
Normal
-0.8
534
Normal
-0.8
553
Tumor
-0.8
128
Normal
-0.8
272
Normal
-0.8
127
Tumor
-0.8
923
Tumor
-0.8
172
Normal
-0.8
411
Tumor
-0.8
435
Tumor
-0.8
955
Tumor
-0.8
412
Normal
-0.8
211
Tumor
-0.8
278
Normal
-0.9
867
Tumor
-0.9
743
Tumor
-0.9
231
Tumor
-0.9
356
Normal
-0.9
516
Normal
-0.9
351
Tumor
-0.9
271
Tumor
-0.9
472
Normal
-0.9
413
Tumor
-0.9
481
Tumor
-0.9
298
Normal
-0.9
484
Normal
-1.0
864
Normal
-1.0
921
Tumor
-1.0
1013
Tumor
-1.0
431
Tumor
-1.0
737
Tumor
-1.0
515
Tumor
-1.1
1032
Normal
-1.1
965
Tumor
-1.1
1042
Normal
-1.2
357
Tumor
-1.2
533
Tumor
-1.3
865
Tumor
-1.4
171
Tumor
-1.4
1031
Tumor
-1.5
661
Tumor
-1.6
473
Tumor
-1.9
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.