Expression of ABHD17A in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

ABHD17A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 24.92

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

20.6

Number of samples

362

Samples

Sample	Description	TPM
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	271.9
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	69.8
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	64.7
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	63.8
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	57.0
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	48.6
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	47.5
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	46.6
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	46.5
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	46.3
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	45.5
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	45.3
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	43.1
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	42.9
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	41.9
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	41.2
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	41.2
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	41.0
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	39.2
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	37.7
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	35.9
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	35.7
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	35.6
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	34.9
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	33.8
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	33.4
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	33.3
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	33.3
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	32.9
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	32.9
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	32.8
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	32.7
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	32.7
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	32.5
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	32.4
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	32.4
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	31.7
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	31.3
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	30.8
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	30.8
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	30.7
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	30.6
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	30.4
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	30.3
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	30.2
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	29.6
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	29.6
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	29.5
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	29.4
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	29.3
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	29.1
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	28.9
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	28.8
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	28.6
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	28.5
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	28.4
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	28.1
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	28.1
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	28.1
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	27.9
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	27.6
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	27.5
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	27.5
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	27.4
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	27.4
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	27.3
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	27.2
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	27.1
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	27.1
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	27.0
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	27.0
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	26.7
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	26.3
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	26.1
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	25.4
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	25.4
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	25.3
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	25.2
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	25.1
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	25.0
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	24.9
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	24.8
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	24.8
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	24.8
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	24.7
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	24.6
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	24.6
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	23.6
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	23.6
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	23.5
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	23.5
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	23.5
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	23.4
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	23.4
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	23.0
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	23.0
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	22.9
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	22.9
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	22.9
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	22.8
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	22.8
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	22.6
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	22.5
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	22.3
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	22.3
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	22.2
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	22.1
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	22.0
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	21.9
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	21.8
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	21.6
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	21.6
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	21.6
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	21.6
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	21.5
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	21.5
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	21.4
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	21.2
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	21.1
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	21.0
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	20.9
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	20.9
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	20.6
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	20.6
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	20.6
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	20.5
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	20.5
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	20.2
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	20.1
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	20.1
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	20.1
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	20.0
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	20.0
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	20.0
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	20.0
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	19.9
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	19.9
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	19.8
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	19.8
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	19.7
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	19.7
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	19.7
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	19.7
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	19.7
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	19.6
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	19.5
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	19.4
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	19.4
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	19.3
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	19.3
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	19.3
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	19.3
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	19.2
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	19.2
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	19.2
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	19.1
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	19.1
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	19.1
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	19.0
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	19.0
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	19.0
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	18.9
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	18.9
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	18.9
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	18.9
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	18.8
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	18.7
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	18.7
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	18.7
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	18.6
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	18.6
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	18.5
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	18.5
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	18.5
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	18.5
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	18.4
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	18.4
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	18.4
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	18.3
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	18.3
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	18.3
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	18.0
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	17.9
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	17.9
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	17.8
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	17.8
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	17.8
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	17.8
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	17.7
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	17.7
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	17.6
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	17.6
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	17.6
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	17.5
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	17.5
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	17.5
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	17.5
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	17.5
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	17.4
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	17.4
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	17.3
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	17.2
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	17.2
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	17.2
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	17.2
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	17.2
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	17.1
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	16.9
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	16.8
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	16.7
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	16.7
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	16.7
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	16.7
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	16.6
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	16.6
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	16.6
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	16.5
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	16.5
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	16.4
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	16.3
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	16.3
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	16.3
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	16.2
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	16.1
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	16.1
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	16.0
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	16.0
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	16.0
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	16.0
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	15.9
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	15.8
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	15.7
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	15.7
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	15.6
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	15.6
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	15.5
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	15.4
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	15.4
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	15.4
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	15.2
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	15.2
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	15.2
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	15.1
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	15.0
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	15.0
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	15.0
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	15.0
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	15.0
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	15.0
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	14.9
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	14.9
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	14.8
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	14.8
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	14.8
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	14.8
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	14.7
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	14.7
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	14.7
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	14.7
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	14.6
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	14.6
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	14.5
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	14.5
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	14.5
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	14.4
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	14.3
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	14.2
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	14.2
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	14.1
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	14.1
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	14.1
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	14.0
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	13.9
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	13.9
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	13.9
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	13.8
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	13.8
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	13.7
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	13.7
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	13.7
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	13.4
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	13.3
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	13.3
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	13.3
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	13.3
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	13.1
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	12.9
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	12.8
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	12.8
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	12.7
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	12.7
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	12.6
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	12.5
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	12.5
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	12.4
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	12.4
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	12.4
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	12.3
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	12.2
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	12.2
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	12.2
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	12.2
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	12.1
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	12.0
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	11.9
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	11.8
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	11.8
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	11.8
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	11.7
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	11.6
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	11.6
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	11.6
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	11.6
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	11.5
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	11.5
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	11.5
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	11.5
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	11.4
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	11.4
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	11.4
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	11.4
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	11.3
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	11.3
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	11.3
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	11.2
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	11.2
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	11.1
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	10.9
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	10.9
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	10.6
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	10.3
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	10.2
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	10.0
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	10.0
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	9.9
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	9.9
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	9.8
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	9.8
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	9.6
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	9.5
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	9.4
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	9.3
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	9.3
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	9.1
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	9.0
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	8.9
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	8.6
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	8.5
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	8.4
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	8.2
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	7.7
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	7.6
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	7.3
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	7.3
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	6.4
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	6.4
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	6.3
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	6.2
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	5.8
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	5.7
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	5.4
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	4.9
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
1014	Normal	1.1
515	Tumor	1.0
743	Tumor	1.0
723	Tumor	0.8
147	Tumor	0.8
1016	Normal	0.7
978	Normal	0.7
517	Tumor	0.6
363	Tumor	0.6
162	Normal	0.6
975	Tumor	0.6
211	Tumor	0.6
525	Tumor	0.5
221	Tumor	0.5
148	Normal	0.5
463	Tumor	0.5
737	Tumor	0.5
648	Normal	0.5
172	Normal	0.5
328	Normal	0.5
982	Normal	0.5
432	Normal	0.5
364	Normal	0.5
728	Normal	0.5
258	Normal	0.4
984	Normal	0.4
492	Normal	0.4
142	Normal	0.4
862	Normal	0.4
666	Normal	0.4
188	Normal	0.4
443	Tumor	0.4
627	Tumor	0.4
131	Tumor	0.4
452	Normal	0.4
445	Tumor	0.4
186	Normal	0.4
227	Tumor	0.4
222	Normal	0.4
617	Tumor	0.4
526	Normal	0.4
884	Normal	0.4
464	Normal	0.4
466	Normal	0.3
434	Normal	0.3
467	Tumor	0.3
877	Tumor	0.3
447	Tumor	0.3
912	Normal	0.3
913	Tumor	0.3
545	Tumor	0.3
882	Normal	0.3
185	Tumor	0.3
664	Normal	0.3
491	Tumor	0.3
514	Normal	0.3
446	Normal	0.3
518	Normal	0.3
516	Normal	0.3
964	Normal	0.3
223	Tumor	0.3
433	Tumor	0.3
436	Normal	0.3
416	Normal	0.3
498	Normal	0.3
161	Tumor	0.3
394	Normal	0.3
925	Tumor	0.3
431	Tumor	0.3
867	Tumor	0.3
412	Normal	0.3
1031	Tumor	0.3
125	Tumor	0.3
538	Normal	0.3
272	Normal	0.2
385	Tumor	0.2
1022	Normal	0.2
878	Normal	0.2
616	Normal	0.2
257	Tumor	0.2
192	Normal	0.2
746	Normal	0.2
493	Tumor	0.2
415	Tumor	0.2
958	Normal	0.2
456	Normal	0.2
187	Tumor	0.2
355	Tumor	0.2
283	Tumor	0.2
1042	Normal	0.2
672	Normal	0.2
926	Normal	0.2
662	Normal	0.2
524	Normal	0.2
881	Tumor	0.2
267	Tumor	0.2
1026	Normal	0.2
976	Normal	0.2
268	Normal	0.2
1046	Normal	0.2
873	Tumor	0.2
661	Tumor	0.2
298	Normal	0.2
553	Tumor	0.2
132	Normal	0.1
756	Normal	0.1
864	Normal	0.1
724	Normal	0.1
484	Normal	0.1
297	Tumor	0.1
228	Normal	0.1
494	Normal	0.1
823	Tumor	0.1
217	Tumor	0.1
356	Normal	0.1
196	Normal	0.1
1025	Tumor	0.1
137	Tumor	0.1
863	Tumor	0.1
271	Tumor	0.1
1015	Tumor	0.1
314	Normal	0.1
546	Normal	0.1
697	Tumor	0.1
786	Normal	0.1
868	Normal	0.1
534	Normal	0.1
392	Normal	0.1
813	Tumor	0.1
483	Tumor	0.1
981	Tumor	0.1
777	Tumor	0.1
141	Tumor	0.1
171	Tumor	0.1
332	Normal	0.1
218	Normal	0.1
146	Normal	0.1
968	Normal	0.1
465	Tumor	0.1
444	Normal	0.1
213	Tumor	0.1
497	Tumor	0.1
212	Normal	0.1
455	Tumor	0.1
528	Normal	0.1
135	Tumor	0.1
232	Normal	0.1
285	Tumor	0.0
312	Normal	0.0
136	Normal	0.0
814	Normal	0.0
214	Normal	0.0
327	Tumor	0.0
778	Normal	0.0
914	Normal	0.0
911	Tumor	0.0
396	Normal	0.0
698	Normal	0.0
145	Tumor	0.0
488	Normal	0.0
1032	Normal	0.0
641	Tumor	0.0
1041	Tumor	0.0
224	Normal	0.0
1028	Normal	0.0
278	Normal	0.0
286	Normal	0.0
127	Tumor	0.0
311	Tumor	0.0
922	Normal	0.0
262	Normal	0.0
388	Normal	0.0
874	Normal	0.0
123	Tumor	0.0
138	Normal	0.0
195	Tumor	0.0
861	Tumor	0.0
533	Tumor	0.0
857	Tumor	0.0
554	Normal	0.0
277	Tumor	0.0
866	Normal	0.0
663	Tumor	0.0
1021	Tumor	0.0
284	Normal	0.0
448	Normal	0.0
628	Normal	0.0
636	Normal	0.0
615	Tumor	0.0
745	Tumor	0.0
966	Normal	0.0
647	Tumor	0.0
451	Tumor	0.0
231	Tumor	-0.1
411	Tumor	-0.1
883	Tumor	-0.1
918	Normal	-0.1
824	Normal	-0.1
742	Normal	-0.1
858	Normal	-0.1
468	Normal	-0.1
618	Normal	-0.1
191	Tumor	-0.1
963	Tumor	-0.1
635	Tumor	-0.1
785	Tumor	-0.1
523	Tumor	-0.1
1043	Tumor	-0.1
261	Tumor	-0.1
865	Tumor	-0.1
727	Tumor	-0.1
917	Tumor	-0.1
923	Tumor	-0.1
915	Tumor	-0.1
487	Tumor	-0.1
671	Tumor	-0.1
537	Tumor	-0.1
665	Tumor	-0.1
128	Normal	-0.2
924	Normal	-0.2
818	Normal	-0.2
642	Normal	-0.2
111	Normal	-0.2
331	Tumor	-0.2
395	Tumor	-0.2
1044	Normal	-0.2
852	Normal	-0.2
816	Normal	-0.2
965	Tumor	-0.2
527	Tumor	-0.2
755	Tumor	-0.2
967	Tumor	-0.2
1013	Tumor	-0.2
921	Tumor	-0.2
738	Normal	-0.2
313	Tumor	-0.2
817	Tumor	-0.2
916	Normal	-0.2
957	Tumor	-0.2
1027	Tumor	-0.2
815	Tumor	-0.2
391	Tumor	-0.3
393	Tumor	-0.3
513	Tumor	-0.3
386	Normal	-0.3
851	Tumor	-0.3
124	Normal	-0.3
744	Normal	-0.3
536	Normal	-0.3
983	Tumor	-0.3
126	Normal	-0.4
1045	Tumor	-0.4
535	Tumor	-0.4
114	Normal	-0.4
977	Tumor	-0.5
435	Tumor	-0.5
741	Tumor	-0.5
112	Tumor	-0.5
387	Tumor	-0.8
113	Tumor	-1.1
471	Tumor	N/A
351	Tumor	N/A
472	Normal	N/A
352	Normal	N/A
473	Tumor	N/A
353	Tumor	N/A
474	Normal	N/A
354	Normal	N/A
477	Tumor	N/A
357	Tumor	N/A
478	Normal	N/A
358	Normal	N/A
481	Tumor	N/A
361	Tumor	N/A
482	Normal	N/A
362	Normal	N/A
365	Tumor	N/A
366	Normal	N/A
367	Tumor	N/A
368	Normal	N/A
375	Tumor	N/A
376	Normal	N/A
937	Tumor	N/A
938	Normal	N/A
383	Tumor	N/A
384	Normal	N/A
943	Tumor	N/A
944	Normal	N/A
951	Tumor	N/A
952	Normal	N/A
953	Tumor	N/A
954	Normal	N/A
713	Tumor	N/A
955	Tumor	N/A
714	Normal	N/A
956	Normal	N/A
715	Tumor	N/A
716	Normal	N/A
721	Tumor	N/A
722	Normal	N/A
413	Tumor	N/A
414	Normal	N/A
421	Tumor	N/A
422	Normal	N/A
423	Tumor	N/A
424	Normal	N/A
425	Tumor	N/A
426	Normal	N/A
427	Tumor	N/A
428	Normal	N/A
557	Tumor	N/A
558	Normal	N/A
563	Tumor	N/A
564	Normal	N/A
685	Tumor	N/A
686	Normal	N/A
567	Tumor	N/A
568	Normal	N/A
571	Tumor	N/A
572	Normal	N/A
573	Tumor	N/A
574	Normal	N/A
695	Tumor	N/A
696	Normal	N/A
461	Tumor	N/A
341	Tumor	N/A
462	Normal	N/A
342	Normal	N/A
343	Tumor	N/A
344	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA043270	Antibody HPA047226
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS