HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.1 nTPM
HPA Brain:21.5 nTPM
GTEx:14.1 nTPM
FANTOM5:43.4 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:22.3 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 21.5
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
1911 Female, age 85, right hemisphere 23.3
2529 Female, age 94, left hemisphere 20.6
2148 Female, age 91, left hemisphere 20.2
2621 Female, age 67, right hemisphere 17.4
1855 Male, age 76, left hemisphere 17.2
1898 Male, age 80, left hemisphere 16.9
Dentate gyrus
nTPM: 18.9
2010 Male, age 76, both hemispheres 20.2
2530 Female, age 94, left hemisphere 20.1
2528 Male, age 74, both hemispheres 20.0
2531 Female, age 67, both hemispheres 18.7
2246 Female, age 85, both hemispheres 17.9
1927 Female, age 91, both hemispheres 16.5
Entorhinal gyrus
nTPM: 20.0
2764 Male, age 80, right hemisphere 23.7
2117 Female, age 91, right hemisphere 21.4
2686 Male, age 75, right hemisphere 21.4
1787 Male, age 76, left hemisphere 19.5
2613 Female, age 94, left hemisphere 19.1
1938 Female, age 85, left hemisphere 14.9
Hippocampus, CA1
nTPM: 18.3
2082 Female, age 91, right hemisphere 25.0
2527 Male, age 74, both hemispheres 19.5
1873 Female, age 85, both hemispheres 16.3
2045 Male, age 76, both hemispheres 15.7
2749 Male, age 80, left hemisphere 15.1
Hippocampus, CA2
nTPM: 19.0
1963 Male, age 80, left hemisphere 20.7
2249 Male, age 74, both hemispheres 20.6
2113 Female, age 91, right hemisphere 19.9
1940 Female, age 85, left hemisphere 19.0
2437 Female, age 94, left hemisphere 19.0
1892 Male, age 76, both hemispheres 15.1
Hippocampus, CA3
nTPM: 18.1
1891 Female, age 85, both hemispheres 22.5
2620 Female, age 94, left hemisphere 21.7
2436 Male, age 74, both hemispheres 18.2
2861 Female, age 67, both hemispheres 17.6
1867 Male, age 76, both hemispheres 16.1
2137 Male, age 80, left hemisphere 12.6
Parahippocampal cortex
nTPM: 17.8
1990 Female, age 91, right hemisphere 20.7
2018 Male, age 76, both hemispheres 20.3
2532 Female, age 72, left hemisphere 19.6
2692 Male, age 74, both hemispheres 19.2
2622 Female, age 67, right hemisphere 17.2
1933 Female, age 85, both hemispheres 16.9
2693 Female, age 94, both hemispheres 16.8
1850 Male, age 80, both hemispheres 16.6
2245 Female, age 91, both hemispheres 16.4
2250 Female, age 67, right hemisphere 14.5
Perirhinal gyrus
nTPM: 16.9
2521 Female, age 94, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.5
2848 Male, age 76, right hemisphere 17.4
1794 Male, age 80, right hemisphere 16.5
1847 Female, age 91, left hemisphere 15.1
Subiculum
nTPM: 21.5
2042 Male, age 76, both hemispheres 25.9
1901 Male, age 80, both hemispheres 22.0
2729 Female, age 91, right hemisphere 21.1
1977 Female, age 85, both hemispheres 21.0
2619 Male, age 74, both hemispheres 19.9
2438 Female, age 94, left hemisphere 18.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 31.5
Min nTPM: 4.7
Std nTPM: 3.9
Median nTPM: 13.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 31.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 24.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 24.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 23.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 23.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 23.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 21.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.4
FF:10153-102I9 76 years, female 48.3
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.2
Pig sample Sample description nTPM
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 19.6
Min nTPM: 17.6
Sample A Female 19.6
Sample B Female 18.8
Sample C Male 18.6
Sample D Male 17.6
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.7
Sample A Female 17.7
Sample B Female 20.5
Sample C Male 18.6
Sample D Male 19.2
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.0
Min nTPM: 17.0
Sample A Female 18.4
Sample B Female 17.0
Sample C Male 17.1
Sample D Male 19.0
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 18.3
Sample C Male 20.8
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.3
Sample A Male 21.7
Sample B Male 24.2
Sample C Female 21.9
Sample D Female 21.3
Hippocampal formation
nTPM: 21.1
Samples: 4

Max nTPM: 24.3
Min nTPM: 19.8
Sample A Male 19.8
Sample B Male 24.3
Sample C Female 20.2
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69169875 Antisense, RP_050321_04_D04, Mouse strain C57BL/6J (56 days, male) 6.8
71158472 Antisense, RP_050810_01_G07, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org