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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAP6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
121.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
375.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
276.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
220.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
220.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
205.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
198.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
194.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
191.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
188.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
187.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
184.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
179.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
173.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
170.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
160.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
159.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
154.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
146.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
144.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
142.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
141.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
140.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
136.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
133.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
130.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
127.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
125.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
124.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
122.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
117.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
114.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
112.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
110.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
109.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
108.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
103.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
101.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
98.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
96.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
92.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
92.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
88.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
85.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
84.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
82.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
82.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
77.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
76.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
76.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
75.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
73.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
69.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
61.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
59.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
58.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
55.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
53.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
41.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
40.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
37.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
33.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAP6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
116.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
80.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
79.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
79.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
73.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
70.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
69.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
69.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
68.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
67.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
65.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
59.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
59.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
58.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
57.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
55.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
55.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
53.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
52.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
50.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
50.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
50.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
48.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
48.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
46.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
46.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
46.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
45.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
45.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
45.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
45.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
45.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
44.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
43.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
42.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
42.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
41.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
41.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
40.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
40.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
40.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
40.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
40.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
39.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
39.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
39.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
39.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
38.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
38.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
38.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
38.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
37.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
37.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
37.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
36.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
36.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
35.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
35.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
35.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
35.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
34.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
34.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
34.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
33.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
33.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
33.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
33.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
33.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
33.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
33.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
33.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
33.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
32.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
32.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
32.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
32.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
31.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
31.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
31.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
31.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
31.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
30.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
30.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
30.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
30.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
29.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
29.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
29.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
29.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
29.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
29.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
29.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
28.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
28.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
27.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
27.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
27.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
27.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
27.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
27.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
27.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
27.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
26.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
26.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
26.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
25.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
25.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
25.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
24.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
24.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
24.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
23.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
23.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
23.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
22.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
21.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
21.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
21.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
20.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
20.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
20.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
20.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
19.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
18.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
18.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
17.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
17.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
17.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
16.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAP6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
62.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
62.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
54.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
52.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
50.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
48.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
48.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
45.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
43.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
41.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
40.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
40.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
36.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
35.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
31.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
31.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
29.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
27.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
26.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
25.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAP6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
225.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
175.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
172.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
169.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
162.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
159.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
154.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
149.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
133.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
131.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
130.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
127.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
125.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
124.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
124.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
118.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
118.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
118.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
117.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
116.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
115.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
114.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
113.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
112.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
109.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
109.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
108.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
106.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
105.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
105.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
104.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
104.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
104.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
103.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
102.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
102.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
99.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
99.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
98.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
98.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
97.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
97.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
96.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
95.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
95.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
95.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
94.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
94.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
93.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
93.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
93.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
91.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
90.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
90.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
90.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
90.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
89.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
89.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
88.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
88.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
87.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
87.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
87.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
86.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
86.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
86.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
86.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
85.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
85.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
84.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
84.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
83.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
83.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
82.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
82.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
82.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
82.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
81.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
81.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
81.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
81.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
80.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
79.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
78.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
78.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
77.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
77.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
77.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
77.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
77.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
76.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
76.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
76.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
76.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
75.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
75.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
75.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
75.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
74.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
74.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
73.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
73.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
73.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
73.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
73.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
73.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
72.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
71.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
71.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
71.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
71.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
71.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
71.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
71.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
71.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
70.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
70.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
70.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
70.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
70.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
70.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
70.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
69.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
69.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
69.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
68.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
68.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
68.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
68.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
67.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
67.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
67.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
67.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
67.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
67.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
66.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
66.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
65.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
65.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
65.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
64.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
64.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
64.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
63.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
63.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
63.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
62.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
62.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
62.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
61.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
61.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
61.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
61.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
60.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
59.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
59.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
59.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
59.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
58.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
58.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
57.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
56.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
55.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
54.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
54.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
54.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
54.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
53.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
53.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
53.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
53.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
53.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
52.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
52.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
52.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
52.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
52.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
52.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
52.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
52.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
51.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
50.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
50.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
50.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
50.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
49.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
49.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
49.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
48.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
48.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
48.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
47.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
47.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
47.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
47.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
46.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
46.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
46.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
45.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
44.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
44.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
44.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
44.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
44.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
43.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
43.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
43.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
42.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
42.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
42.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
42.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
42.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
40.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
40.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
40.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
38.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
38.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
37.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
37.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
37.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
37.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
37.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
36.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
36.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
36.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
36.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
33.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
32.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
30.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
30.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
29.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
28.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
28.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
27.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
25.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
24.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
