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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
217.5
nTPM
HPA Brain:
904.6
nTPM
GTEx:
217.5
nTPM
FANTOM5:
580.3
Scaled Tags Per Million
Pig:
757.5
nTPM
Mouse:
480.2
nTPM
Allen mouse:
17.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
904.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 560.9
2586
Male, age 75, left hemisphere
911.2
2828
Female, age 72, unknown
692.7
1833
Male, age 53, unknown
638.3
1827
Male, age 72, unknown
577.3
2219
Male, age 76, both hemispheres
529.7
2666
Male, age 74, left hemisphere
528.3
1830
Male, age 51, unknown
509.0
1870
Female, age 42, unknown
454.6
2411
Female, age 72, unknown
449.9
2019
Male, age 18, unknown
318.1
Dorsal raphe nucleus nTPM: 701.6
2047
Male, age 72, unknown
916.7
1828
Male, age 53, unknown
878.7
2016
Female, age 72, unknown
674.3
2298
Female, age 72, unknown
558.8
2750
Male, age 76, both hemispheres
479.2
Inferior colliculus nTPM: 904.6
2849
Male, age 72, unknown
1034.1
1848
Female, age 42, unknown
987.0
1890
Male, age 53, unknown
815.1
2097
Female, age 72, unknown
782.0
Median raphe nucleus nTPM: 544.6
2220
Male, age 76, midline
544.6
Periaquaductal grey, anterior nTPM: 587.4
2502
Female, age 75, unknown
619.1
1947
Male, age 18, unknown
608.5
1795
Male, age 51, unknown
534.5
Periaquaductal grey, dorsal nTPM: 705.2
2850
Male, age 76, both hemispheres
882.1
1840
Male, age 53, unknown
722.4
2464
Female, age 72, unknown
686.9
1831
Male, age 72, unknown
529.2
Periaquaductal grey, lateral nTPM: 644.9
2140
Male, age 76, both hemispheres
813.9
2053
Male, age 18, unknown
683.9
2272
Male, age 74, both hemispheres
436.7
Pretectal area nTPM: 565.6
2825
Male, age 18, unknown
751.5
1817
Female, age 42, unknown
739.2
1944
Female, age 72, unknown
649.4
1816
Male, age 51, unknown
622.8
2667
Female, age 75, unknown
620.9
2224
Female, age 72, unknown
541.3
2273
Male, age 74, both hemispheres
477.3
2316
Male, age 76, right hemisphere
475.7
1815
Male, age 53, unknown
473.7
2007
Male, age 72, unknown
453.6
2407
Male, age 75, both hemispheres
416.0
Red nucleus nTPM: 639.2
1954
Female, age 42, unknown
796.4
2823
Male, age 76, right hemisphere
786.3
2725
Female, age 75, unknown
775.2
2503
Female, age 72, unknown
727.9
2227
Male, age 72, unknown
675.9
1821
Female, age 72, unknown
674.7
2769
Male, age 72, unknown
665.8
1865
Male, age 51, unknown
616.5
2588
Male, age 74, left hemisphere
609.8
1904
Male, age 53, unknown
575.5
2584
Male, age 75, left hemisphere
443.3
2785
Male, age 18, unknown
323.4
Substantia nigra nTPM: 631.0
2699
Male, age 18, unknown
1088.2
1916
Female, age 42, unknown
807.6
1889
Female, age 72, unknown
644.8
1941
Male, age 53, unknown
614.8
2665
Male, age 74, both hemispheres
600.7
2241
Male, age 72, unknown
551.7
1851
Male, age 51, unknown
545.3
2409
Female, age 72, unknown
517.6
2583
Male, age 75, right hemisphere
476.2
2590
Female, age 75, unknown
462.7
Superior colliculus nTPM: 544.2
2087
Female, age 72, unknown
657.6
2664
Male, age 75, both hemispheres
655.4
2261
Male, age 18, unknown
638.9
1839
Male, age 51, unknown
625.5
1796
Male, age 53, unknown
521.3
1895
Male, age 76, right hemisphere
511.7
1995
Male, age 72, unknown
494.3
2668
Female, age 75, unknown
480.7
2587
Male, age 74, left hemisphere
438.7
1913
Female, age 42, unknown
418.1
Ventral tegmental area nTPM: 526.2
2218
Male, age 76, both hemispheres
630.3
2410
Female, age 72, unknown
552.8
1942
Male, age 51, unknown
526.9
1915
Female, age 42, unknown
521.2
2021
Male, age 53, unknown
470.2
2223
Female, age 72, unknown
455.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
217.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 217.5
Samples: 139
Max nTPM: 941.1
Min nTPM: 24.5
Std nTPM: 153.6
Median nTPM: 191.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
941.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
786.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
738.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
707.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
706.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
583.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
558.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
478.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
470.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
461.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
455.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
444.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
412.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
393.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
379.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
344.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
341.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
341.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
338.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
334.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
332.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
328.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
325.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
321.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
314.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
303.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
299.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
295.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
292.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
286.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
281.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
276.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
272.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
267.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
266.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
261.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
259.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
256.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
249.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
242.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
242.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
239.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
236.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
234.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
227.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
224.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
222.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
217.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
215.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
215.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
214.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
213.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
213.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
212.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
211.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
211.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
208.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
207.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
205.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
205.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
202.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
202.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
200.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
199.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
198.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
197.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
194.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
193.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
193.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
191.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
188.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
186.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
183.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
180.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
179.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
172.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
172.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
168.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
168.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
166.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
159.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
159.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
158.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
154.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
152.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
150.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
150.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
150.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
150.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
149.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
148.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
148.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
142.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
141.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
140.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
132.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
131.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
131.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
131.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
130.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
122.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
119.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
119.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
114.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
113.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
110.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
107.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
107.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
105.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
105.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
105.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
104.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
102.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
98.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
97.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
97.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
96.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
91.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
88.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
85.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
84.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
83.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
83.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
80.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
76.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
73.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
72.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
67.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
63.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
59.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
57.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
56.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
53.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
52.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
48.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
48.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
47.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
31.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
24.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
480.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 480.2
Samples: 4
Max nTPM: 517.4
Min nTPM: 458.5
Sample A
Male
458.5
Sample B
Male
461.8
Sample C
Female
517.4
Sample D
Female
483.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.