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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KLHDC10 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
38.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
36.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
31.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
31.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
30.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
27.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
26.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
26.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
26.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
22.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
22.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
22.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
22.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
22.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
22.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
21.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
21.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
21.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
20.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
20.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
20.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
20.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
20.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
20.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
19.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
19.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
18.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
18.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
18.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
17.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
17.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
17.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
17.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
16.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
16.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
16.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
15.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
15.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
14.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
14.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
14.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
14.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
13.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
13.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
13.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
13.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
13.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
13.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
12.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
12.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
11.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
10.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
10.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
9.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
9.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
8.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
8.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
8.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
7.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
6.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
6.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
6.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
6.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
6.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
6.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
5.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
4.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
4.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
4.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KLHDC10 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
36.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
35.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
35.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
34.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
34.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
31.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
27.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
27.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
27.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
26.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
26.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
25.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
24.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
23.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
21.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
21.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
21.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
20.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
20.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
20.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
19.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
19.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
18.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
17.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
17.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
17.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
17.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
17.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
16.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
16.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
16.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
16.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
16.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
16.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
15.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
15.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
14.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
14.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
14.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
14.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
14.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
14.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
14.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
13.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
13.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
12.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
12.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
11.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
11.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
11.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
10.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
9.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
9.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
9.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
9.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
7.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
7.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
6.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
6.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
5.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
3.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
3.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
481
Tumor
1.2
222
Normal
1.2
533
Tumor
1.2
615
Tumor
1.2
231
Tumor
1.1
1032
Normal
1.0
196
Normal
1.0
1022
Normal
1.0
1028
Normal
0.9
214
Normal
0.8
1041
Tumor
0.8
213
Tumor
0.8
912
Normal
0.8
137
Tumor
0.8
132
Normal
0.8
618
Normal
0.8
882
Normal
0.7
186
Normal
0.7
884
Normal
0.7
878
Normal
0.7
162
Normal
0.7
218
Normal
0.7
191
Tumor
0.7
258
Normal
0.7
342
Normal
0.7
513
Tumor
0.7
161
Tumor
0.7
172
Normal
0.7
185
Tumor
0.7
616
Normal
0.7
627
Tumor
0.7
818
Normal
0.7
944
Normal
0.7
353
Tumor
0.6
938
Normal
0.6
148
Normal
0.6
911
Tumor
0.6
136
Normal
0.6
982
Normal
0.6
445
Tumor
0.6
128
Normal
0.6
257
Tumor
0.6
648
Normal
0.6
354
Normal
0.6
111
Normal
0.6
1016
Normal
0.5
635
Tumor
0.5
628
Normal
0.5
564
Normal
0.5
171
Tumor
0.5
138
Normal
0.5
742
Normal
0.5
188
Normal
0.5
955
Tumor
0.5
261
Tumor
0.5
477
Tumor
0.5
636
Normal
0.5
423
Tumor
0.5
514
Normal
0.5
954
Normal
0.5
232
Normal
0.5
145
Tumor
0.5
1014
Normal
0.5
482
Normal
0.5
141
Tumor
0.5
146
Normal
0.5
435
Tumor
0.5
462
Normal
0.5
641
Tumor
0.5
572
Normal
0.5
114
Normal
0.5
956
Normal
0.5
127
Tumor
0.4
964
Normal
0.4
217
Tumor
0.4
436
Normal
0.4
428
Normal
0.4
267
Tumor
0.4
642
Normal
0.4
858
Normal
0.4
777
Tumor
0.4
314
Normal
0.4
425
Tumor
0.4
824
Normal
0.4
422
Normal
0.4
187
Tumor
0.4
464
Normal
0.4
978
Normal
0.4
424
Normal
0.4
518
Normal
0.4
472
Normal
0.4
414
Normal
0.4
298
Normal
0.4
862
Normal
0.4
728
Normal
0.4
666
Normal
0.4
723
Tumor
0.4
415
Tumor
0.4
484
Normal
0.4
926
Normal
0.4
494
Normal
0.4
426
Normal
0.4
358
Normal
0.3
557
Tumor
0.3
192
Normal
0.3
755
Tumor
0.3
977
Tumor
0.3
914
Normal
0.3
664
Normal
0.3
866
Normal
0.3
365
Tumor
0.3
272
Normal
0.3
327
Tumor
0.3
195
Tumor
0.3
554
Normal
0.3
563
Tumor
0.3
952
Normal
0.3
863
Tumor
0.3
568
Normal
0.3
786
Normal
0.3
1013
Tumor
0.3
976
Normal
0.3
488
Normal
0.3
432
Normal
0.3
1046
Normal
0.3
816
Normal
0.3
874
Normal
0.3
738
Normal
0.3
857
Tumor
0.2
357
Tumor
0.2
852
Normal
0.2
456
Normal
0.2
376
Normal
0.2
558
Normal
0.2
286
Normal
0.2
468
Normal
0.2
864
Normal
0.2
966
Normal
0.2
268
Normal
0.2
142
Normal
0.2
474
Normal
0.2
412
Normal
0.2
328
Normal
0.2
662
Normal
0.2
421
Tumor
0.2
913
Tumor
0.2
362
Normal
0.2
984
Normal
0.2
698
Normal
0.2
126
Normal
0.2
262
Normal
0.2
574
Normal
0.2
352
Normal
0.2
452
Normal
0.2
981
Tumor
0.2
448
Normal
0.2
722
Normal
0.2
546
Normal
0.2
538
Normal
0.2
525
Tumor
0.2
366
Normal
0.2
813
Tumor
0.2
534
Normal
0.2
868
Normal
0.2
647
Tumor
0.2
431
Tumor
0.2
785
Tumor
0.2
1026
Normal
0.2
756
Normal
0.2
922
Normal
0.2
221
Tumor
0.2
224
Normal
0.2
968
Normal
0.2
483
Tumor
0.2
1045
Tumor
0.2
744
Normal
0.2
515
Tumor
0.1
443
Tumor
0.1
394
Normal
0.1
851
Tumor
0.1
617
Tumor
0.1
461
Tumor
0.1
958
Normal
0.1
1044
Normal
0.1
344
Normal
0.1
147
Tumor
0.1
284
Normal
0.1
343
Tumor
0.1
388
Normal
0.1
312
Normal
0.1
228
Normal
0.1
873
Tumor
0.1
433
Tumor
0.1
493
Tumor
0.1
375
Tumor
0.1
278
Normal
0.1
396
Normal
0.1
746
Normal
0.1
113
Tumor
0.1
526
Normal
0.1
356
Normal
0.1
963
Tumor
0.1
663
Tumor
0.1
528
Normal
0.1
951
Tumor
0.1
392
Normal
0.0
498
Normal
0.0
492
Normal
0.0
714
Normal
0.0
124
Normal
0.0
416
Normal
0.0
953
Tumor
0.0
815
Tumor
0.0
446
Normal
0.0
918
Normal
0.0
341
Tumor
0.0
672
Normal
0.0
364
Normal
0.0
455
Tumor
0.0
466
Normal
0.0
741
Tumor
0.0
361
Tumor
0.0
112
Tumor
0.0
297
Tumor
0.0
368
Normal
0.0
778
Normal
0.0
451
Tumor
0.0
212
Normal
0.0
867
Tumor
0.0
384
Normal
0.0
665
Tumor
0.0
313
Tumor
-0.1
924
Normal
-0.1
332
Normal
-0.1
123
Tumor
-0.1
387
Tumor
-0.1
737
Tumor
-0.1
395
Tumor
-0.1
478
Normal
-0.1
685
Tumor
-0.1
1025
Tumor
-0.1
135
Tumor
-0.2
386
Normal
-0.2
883
Tumor
-0.2
721
Tumor
-0.2
527
Tumor
-0.2
925
Tumor
-0.2
1043
Tumor
-0.2
567
Tumor
-0.2
473
Tumor
-0.2
517
Tumor
-0.2
727
Tumor
-0.2
434
Normal
-0.2
937
Tumor
-0.2
696
Normal
-0.2
427
Tumor
-0.2
814
Normal
-0.3
975
Tumor
-0.3
393
Tumor
-0.3
487
Tumor
-0.3
957
Tumor
-0.3
716
Normal
-0.3
943
Tumor
-0.3
553
Tumor
-0.3
383
Tumor
-0.3
915
Tumor
-0.3
444
Normal
-0.3
516
Normal
-0.3
686
Normal
-0.3
447
Tumor
-0.3
965
Tumor
-0.3
497
Tumor
-0.3
351
Tumor
-0.3
524
Normal
-0.3
491
Tumor
-0.3
311
Tumor
-0.3
223
Tumor
-0.3
227
Tumor
-0.3
861
Tumor
-0.4
881
Tumor
-0.4
536
Normal
-0.4
743
Tumor
-0.4
745
Tumor
-0.4
865
Tumor
-0.4
916
Normal
-0.4
535
Tumor
-0.4
545
Tumor
-0.4
823
Tumor
-0.4
967
Tumor
-0.4
724
Normal
-0.4
573
Tumor
-0.4
271
Tumor
-0.5
463
Tumor
-0.5
467
Tumor
-0.5
917
Tumor
-0.5
983
Tumor
-0.5
363
Tumor
-0.5
697
Tumor
-0.5
411
Tumor
-0.5
471
Tumor
-0.5
413
Tumor
-0.5
713
Tumor
-0.5
817
Tumor
-0.5
283
Tumor
-0.6
715
Tumor
-0.6
385
Tumor
-0.6
1031
Tumor
-0.6
1042
Normal
-0.6
571
Tumor
-0.6
391
Tumor
-0.6
923
Tumor
-0.6
125
Tumor
-0.6
1015
Tumor
-0.6
671
Tumor
-0.6
355
Tumor
-0.6
695
Tumor
-0.6
465
Tumor
-0.6
211
Tumor
-0.7
661
Tumor
-0.7
277
Tumor
-0.7
331
Tumor
-0.9
537
Tumor
-1.0
131
Tumor
-1.0
1027
Tumor
-1.0
523
Tumor
-1.1
367
Tumor
-1.1
285
Tumor
-1.1
1021
Tumor
-1.2
921
Tumor
-1.2
877
Tumor
-1.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
