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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PODXL is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
56.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
43.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
31.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
27.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
25.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
23.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
23.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
21.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
17.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
16.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
8.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PODXL is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
373.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
237.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
205.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
204.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
198.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
196.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
191.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
189.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
186.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
183.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
176.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
168.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
166.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
164.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
164.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
160.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
154.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
152.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
151.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
146.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
142.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
138.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
136.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
135.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
135.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
135.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
131.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
129.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
129.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
127.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
127.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
126.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
125.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
125.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
124.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
124.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
123.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
120.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
120.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
119.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
118.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
118.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
116.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
116.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
116.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
113.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
111.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
110.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
107.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
106.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
106.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
106.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
106.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
106.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
105.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
105.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
103.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
102.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
100.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
100.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
99.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
99.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
99.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
98.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
98.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
98.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
97.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
97.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
96.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
96.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
96.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
95.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
95.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
92.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
89.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
89.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
88.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
88.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
88.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
88.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
88.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
88.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
88.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
87.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
87.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
87.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
87.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
87.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
87.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
87.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
86.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
86.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
85.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
84.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
84.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
84.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
84.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
84.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
84.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
84.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
83.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
83.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
83.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
82.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
82.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
82.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
82.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
81.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
81.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
81.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
81.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
80.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
80.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
80.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
79.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
79.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
79.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
79.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
78.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
78.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
78.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
78.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
78.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
77.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
76.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
76.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
76.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
76.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
76.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
75.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
75.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
74.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
74.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
74.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
74.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
74.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
73.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
72.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
72.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
72.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
72.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
72.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
72.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
72.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
71.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
71.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
71.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
70.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
70.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
70.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
70.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
70.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
69.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
68.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
68.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
68.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
67.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
67.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
67.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
66.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
66.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
66.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
66.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
66.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
66.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
65.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
64.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
64.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
64.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
63.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
63.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
63.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
62.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
62.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
62.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
62.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
61.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
61.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
60.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
60.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
60.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
60.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
60.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
60.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
59.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
59.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
59.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
59.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
59.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
58.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
58.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
58.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
58.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
58.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
58.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
58.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
58.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
58.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
58.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
57.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
57.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
57.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
56.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
56.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
56.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
56.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
55.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
55.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
55.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
55.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
55.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
54.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
54.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
54.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
53.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
53.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
53.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
53.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
53.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
53.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
52.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
52.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
51.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
51.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
51.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
50.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
50.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
50.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
50.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
49.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
49.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
49.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
47.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
46.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
46.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
46.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
46.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
46.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
45.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
45.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
44.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
44.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
44.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
44.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
43.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
43.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
43.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
43.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
42.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
42.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
41.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
41.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
40.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
40.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
40.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
38.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
38.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
38.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
37.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
37.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
36.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
36.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
35.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
35.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
34.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
34.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
33.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
33.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
33.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
32.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
32.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
32.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
30.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
30.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
30.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
29.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
29.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
29.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
29.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
29.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
27.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
27.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
27.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
26.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
25.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
25.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
25.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
25.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
25.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
23.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
21.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
18.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
6.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
4.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
3.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
3.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
2.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PODXL is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
205.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
144.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
125.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
124.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
119.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
112.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
109.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
106.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
99.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
97.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
96.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
94.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
92.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
92.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
90.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
84.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
84.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
81.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
78.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
75.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
74.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
74.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
74.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
70.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
70.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
70.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
69.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
68.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
68.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
67.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
64.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
62.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
62.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
60.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
59.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
58.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
58.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
58.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
57.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
56.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
55.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
55.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
49.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
49.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
47.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
45.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
43.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
37.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
37.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
35.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
34.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
33.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
32.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
30.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
29.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
26.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
25.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
6.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
5.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
3.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PODXL is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
94.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
84.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
79.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
64.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
56.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
52.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
42.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
34.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
28.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
13.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
11.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
11.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
8.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
8.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
7.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
7.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
7.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
6.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
6.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
6.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
6.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
6.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
5.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
5.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
5.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
5.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
5.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
5.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
5.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
5.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
4.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
4.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
4.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
4.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
4.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
4.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
3.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
3.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
3.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
3.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
3.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
3.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
3.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
3.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
3.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
3.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
3.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
3.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
3.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
3.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
3.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
3.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
3.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
3.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
3.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
2.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
2.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
2.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
2.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
2.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
2.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
2.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
2.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
2.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
2.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
2.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
2.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
2.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
1.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
1.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
1.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065450001
Normal
1.4
CPT0088710001
Normal
1.3
CPT0010170001
Normal
1.2
CPT0025060001
Normal
1.1
CPT0089480003
Normal
1.1
CPT0077140001
Normal
1.1
CPT0013790003
Normal
1.0
CPT0077320001
Normal
1.0
CPT0092310003
Normal
1.0
CPT0023710001
Normal
1.0
CPT0023360001
Normal
0.9
CPT0014130001
Normal
0.9
CPT0082010001
Normal
0.9
CPT0020020001
Normal
0.9
CPT0012090003
Normal
0.9
CPT0006950001
Normal
0.9
CPT0092740003
Normal
0.9
CPT0006730001
Normal
0.8
CPT0088920001
Normal
0.8
CPT0012770003
Normal
0.8
CPT0081620001
Normal
0.8
CPT0001190001
Normal
0.8
CPT0089040001
Normal
0.7
CPT0026420001
Normal
0.7
CPT0077500001
Normal
0.7
CPT0066430001
Normal
0.7
CPT0012290003
Normal
0.7
CPT0076350001
Normal
0.7
CPT0075720003
Tumor
0.7
CPT0078840001
Normal
0.7
CPT0088780001
Normal
0.6
CPT0000790001
Normal
0.6
CPT0069010001
Normal
0.6
CPT0017450001
Normal
0.6
CPT0086370003
Normal
0.6
CPT0001510001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0088570001
Normal
0.6
CPT0065820001
Normal
0.5
CPT0006530001
Normal
0.5
CPT0087050003
Normal
0.5
CPT0086890003
Normal
0.5
CPT0007470001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0066520001
Normal
0.5
CPT0000890001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0078670001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0020130001
Normal
0.4
CPT0025170003
Tumor
0.4
CPT0018250001
Normal
0.4
CPT0075570001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0009080003
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0012570003
Normal
0.3
CPT0024680001
Normal
0.3
CPT0088760003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0088640003
Normal
0.3
CPT0092730003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0025350003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0084590001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0014470001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0069190001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0001550001
Normal
-0.2
CPT0015810003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0079230003
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0088480003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0012900004
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0025580004
Tumor
-0.5
CPT0010120001
Normal
-0.5
CPT0065690003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0089460004
Tumor
-0.5
CPT0026410003
Tumor
-0.6
CPT0081990003
Tumor
-0.6
CPT0002370001
Normal
-0.6
CPT0079510001
Normal
-0.6
CPT0001540009
Tumor
-0.6
CPT0065810003
Tumor
-0.6
CPT0021240003
Tumor
-0.6
CPT0019130003
Tumor
-0.6
CPT0092290003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0075130003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0012640003
Normal
-0.7
CPT0085670003
Tumor
-0.8
CPT0025290003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0081600003
Tumor
-0.8
CPT0065430003
Tumor
-0.8
CPT0007860003
Tumor
-0.8
CPT0079410003
Tumor
-0.8
CPT0012670003
Tumor
-0.9
CPT0078660003
Tumor
-0.9
CPT0092160003
Tumor
-0.9
CPT0078510003
Tumor
-0.9
CPT0012550003
Tumor
-0.9
CPT0069000003
Tumor
-0.9
CPT0086820003
Tumor
-1.0
CPT0015730003
Tumor
-1.0
CPT0020120003
Tumor
-1.0
CPT0086360003
Tumor
-1.0
CPT0001260009
Tumor
-1.0
CPT0079270003
Tumor
-1.0
CPT0092190003
Normal
-1.0
CPT0069160003
Tumor
-1.0
CPT0010110003
Tumor
-1.0
CPT0064370003
Tumor
-1.1
CPT0001180009
Tumor
-1.1
CPT0088690003
Tumor
-1.1
CPT0025110003
Tumor
-1.1
CPT0086950003
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0002350011
Tumor
-1.2
CPT0012280003
Tumor
-1.2
CPT0014160003
Tumor
-1.2
CPT0065930003
Tumor
-1.2
CPT0079300001
Normal
-1.2
CPT0024670003
Tumor
-1.4
CPT0079180003
Tumor
-1.4
CPT0077110003
Tumor
-1.4
CPT0009060003
Tumor
-1.4
CPT0063630003
Tumor
-1.4
CPT0014450004
Tumor
-1.5
CPT0023350003
Tumor
-1.5
CPT0088970003
Tumor
-1.6
CPT0076330003
Tumor
-1.6
CPT0001340003
Tumor
-1.7
CPT0084560003
Tumor
-1.7
CPT0025050003
Tumor
-1.8
CPT0081880003
Tumor
-1.9
CPT0002270011
Tumor
-1.9
CPT0012180003
Tumor
-2.1
CPT0011410003
Tumor
-2.2
CPT0088550004
Tumor
-2.4
CPT0078800003
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.