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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOL2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
157.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
122.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
105.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
101.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
95.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
92.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
89.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
88.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
87.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
86.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
84.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
79.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
78.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
78.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
78.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
76.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
76.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
75.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
75.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
73.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
73.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
72.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
72.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
70.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
69.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
69.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
67.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
67.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
66.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
65.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
64.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
64.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
64.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
63.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
63.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
62.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
62.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
62.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
60.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
60.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
60.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
60.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
59.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
58.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
58.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
57.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
56.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
56.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
55.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
55.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
55.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
53.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
53.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
53.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
52.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
52.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
52.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
52.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
51.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
51.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
51.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
51.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
50.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
49.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
48.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
48.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
47.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
47.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
47.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
47.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
47.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
47.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
47.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
47.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
47.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
47.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
47.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
46.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
46.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
46.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
46.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
46.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
45.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
45.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
44.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
44.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
44.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
43.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
43.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
43.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
43.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
42.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
42.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
42.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
42.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
41.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
41.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
41.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
40.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
40.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
40.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
40.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
40.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
40.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
40.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
39.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
39.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
39.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
39.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
38.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
38.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
38.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
38.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
38.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
37.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
37.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
37.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
37.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
37.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
37.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
36.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
36.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
36.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
36.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
36.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
36.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
36.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
36.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
35.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
35.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
35.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
35.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
35.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
35.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
34.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
34.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
34.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
34.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
34.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
34.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
34.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
34.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
34.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
33.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
33.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
33.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
33.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
33.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
33.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
33.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
33.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
33.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
32.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
32.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
32.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
32.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
32.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
32.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
32.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
32.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
31.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
31.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
30.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
30.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
30.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
30.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
30.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
30.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
29.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
29.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
29.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
29.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
29.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
29.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
28.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
28.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
28.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
28.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
28.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
27.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
27.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
27.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
27.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
27.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
27.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
27.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
27.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
27.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
27.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
26.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
26.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
26.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
26.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
26.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
26.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
26.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
25.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
25.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
25.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
25.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
25.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
25.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
24.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
24.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
24.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
24.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
24.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
24.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
24.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
24.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
23.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
23.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
23.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
23.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
23.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
23.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
23.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
23.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
23.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
23.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
22.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
22.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
22.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
22.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
22.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
22.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
22.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
22.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
22.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
22.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
21.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
21.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
21.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
21.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
21.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
21.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
21.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
20.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
20.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
20.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
20.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
20.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
20.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
20.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
20.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
20.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
20.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
20.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
20.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
19.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
19.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
19.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
19.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
19.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
19.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
19.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
19.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
18.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
18.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
18.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
18.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
18.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
18.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
18.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
18.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
17.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
17.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
17.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
17.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
17.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
17.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
17.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
16.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
16.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
16.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
16.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
16.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
16.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
16.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
16.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
15.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
15.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
15.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
15.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
15.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
15.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
14.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
14.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
14.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
13.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
13.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
13.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
13.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
13.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
13.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
12.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
12.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
12.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
12.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
11.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
11.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
10.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOL2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.8
Number of samples
231
Samples
Sample
Description
TPM
DO45301
0 years, male, NA, stage:2, dead, 1440 days
199.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
192.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
122.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
120.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
118.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
106.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
98.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
97.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
94.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
88.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
86.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
82.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
79.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
74.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
72.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
71.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
67.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
66.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
65.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
64.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
63.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
61.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
60.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
56.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
56.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
54.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
52.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
51.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
50.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
50.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
50.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
50.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
49.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
49.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
49.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
48.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
48.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
48.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
48.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
48.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
47.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
47.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
47.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
46.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
46.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
45.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
43.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
43.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
43.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
43.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
43.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
42.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
41.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
41.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
41.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
40.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
40.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
40.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
40.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
39.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
39.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
39.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
39.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
39.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
38.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
38.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
38.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
38.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
38.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
37.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
37.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
37.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
37.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
36.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
35.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
35.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
35.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
35.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
34.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
34.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
33.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
33.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
32.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
32.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
32.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
32.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
32.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
32.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
31.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
31.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
31.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
31.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
31.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
31.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
30.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
30.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
30.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
30.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
30.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
30.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
30.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
30.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
30.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
30.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
29.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
29.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
29.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
29.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
29.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
28.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
28.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
28.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
28.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
28.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
27.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
27.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
27.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
27.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
27.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
27.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
27.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
27.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
26.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
26.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
26.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
26.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
26.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
26.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
25.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
25.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
25.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
24.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
23.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
23.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
23.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
23.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
23.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
22.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
22.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
22.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
22.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
22.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
22.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
22.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
21.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
21.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
20.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
20.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
20.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
20.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
20.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
20.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
20.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
20.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
20.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
19.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
19.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
19.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
19.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
18.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
18.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
17.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
17.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
16.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
16.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
16.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
15.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
15.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
15.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
15.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
15.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
14.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
13.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
13.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
13.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
12.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
12.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
513
Tumor
1.2
1031
Tumor
1.1
533
Tumor
1.1
857
Tumor
1.1
223
Tumor
1.1
1027
Tumor
1.0
262
Normal
0.9
978
Normal
0.9
627
Tumor
0.8
434
Normal
0.7
341
Tumor
0.7
724
Normal
0.7
213
Tumor
0.7
427
Tumor
0.7
914
Normal
0.6
817
Tumor
0.6
383
Tumor
0.6
261
Tumor
0.6
195
Tumor
0.6
188
Normal
0.6
937
Tumor
0.6
571
Tumor
0.6
416
Normal
0.6
327
Tumor
0.6
1045
Tumor
0.6
727
Tumor
0.5
451
Tumor
0.5
356
Normal
0.5
362
Normal
0.5
1043
Tumor
0.5
557
Tumor
0.5
452
Normal
0.5
868
Normal
0.5
745
Tumor
0.5
884
Normal
0.5
648
Normal
0.5
786
Normal
0.5
925
Tumor
0.4
966
Normal
0.4
217
Tumor
0.4
313
Tumor
0.4
436
Normal
0.4
422
Normal
0.4
462
Normal
0.4
981
Tumor
0.4
628
Normal
0.4
662
Normal
0.4
514
Normal
0.4
113
Tumor
0.4
755
Tumor
0.4
126
Normal
0.4
951
Tumor
0.4
414
Normal
0.4
484
Normal
0.4
534
Normal
0.4
272
Normal
0.4
922
Normal
0.4
464
Normal
0.4
926
Normal
0.4
432
Normal
0.4
488
Normal
0.4
396
Normal
0.4
494
Normal
0.4
862
Normal
0.3
435
Tumor
0.3
212
Normal
0.3
618
Normal
0.3
874
Normal
0.3
537
Tumor
0.3
866
Normal
0.3
257
Tumor
0.3
428
Normal
0.3
861
Tumor
0.3
466
Normal
0.3
882
Normal
0.3
528
Normal
0.3
982
Normal
0.3
492
Normal
0.3
918
Normal
0.3
482
Normal
0.3
698
Normal
0.3
518
Normal
0.3
546
Normal
0.3
361
Tumor
0.3
685
Tumor
0.3
955
Tumor
0.3
567
Tumor
0.3
468
Normal
0.3
172
Normal
0.3
481
Tumor
0.3
952
Normal
0.3
554
Normal
0.3
268
Normal
0.3
472
Normal
0.3
474
Normal
0.3
968
Normal
0.3
615
Tumor
0.3
328
Normal
0.3
944
Normal
0.3
111
Normal
0.3
568
Normal
0.3
424
Normal
0.3
525
Tumor
0.3
664
Normal
0.3
913
Tumor
0.3
426
Normal
0.3
412
Normal
0.3
728
Normal
0.3
714
Normal
0.3
218
Normal
0.3
867
Tumor
0.3
1046
Normal
0.3
864
Normal
0.2
353
Tumor
0.2
916
Normal
0.2
446
Normal
0.2
222
Normal
0.2
114
Normal
0.2
964
Normal
0.2
456
Normal
0.2
915
Tumor
0.2
364
Normal
0.2
258
Normal
0.2
477
Tumor
0.2
564
Normal
0.2
938
Normal
0.2
128
Normal
0.2
723
Tumor
0.2
366
Normal
0.2
742
Normal
0.2
491
Tumor
0.2
563
Tumor
0.2
824
Normal
0.2
574
Normal
0.2
467
Tumor
0.2
138
Normal
0.2
1042
Normal
0.2
358
Normal
0.2
145
Tumor
0.2
1044
Normal
0.2
314
Normal
0.2
852
Normal
0.2
558
Normal
0.2
448
Normal
0.2
286
Normal
0.2
958
Normal
0.2
721
Tumor
0.2
1028
Normal
0.2
722
Normal
0.2
147
Tumor
0.2
1026
Normal
0.2
516
Normal
0.2
127
Tumor
0.2
756
Normal
0.2
214
Normal
0.2
686
Normal
0.2
388
Normal
0.2
433
Tumor
0.2
666
Normal
0.2
873
Tumor
0.1
191
Tumor
0.1
738
Normal
0.1
642
Normal
0.1
1022
Normal
0.1
1032
Normal
0.1
123
Tumor
0.1
196
Normal
0.1
572
Normal
0.1
816
Normal
0.1
332
Normal
0.1
278
Normal
0.1
498
Normal
0.1
132
Normal
0.1
524
Normal
0.1
228
Normal
0.1
455
Tumor
0.1
211
Tumor
0.1
395
Tumor
0.1
984
Normal
0.1
131
Tumor
0.1
137
Tumor
0.1
957
Tumor
0.1
421
Tumor
0.1
391
Tumor
0.1
284
Normal
0.1
716
Normal
0.1
1016
Normal
0.1
526
Normal
0.1
141
Tumor
0.1
1015
Tumor
0.1
616
Normal
0.1
954
Normal
0.1
376
Normal
0.1
186
Normal
0.1
443
Tumor
0.1
365
Tumor
0.1
746
Normal
0.1
185
Tumor
0.1
298
Normal
0.1
232
Normal
0.1
517
Tumor
0.0
851
Tumor
0.0
536
Normal
0.0
461
Tumor
0.0
917
Tumor
0.0
976
Normal
0.0
515
Tumor
0.0
392
Normal
0.0
162
Normal
0.0
171
Tumor
0.0
956
Normal
0.0
661
Tumor
0.0
912
Normal
0.0
394
Normal
0.0
465
Tumor
0.0
953
Tumor
0.0
142
Normal
0.0
865
Tumor
0.0
224
Normal
0.0
368
Normal
0.0
672
Normal
0.0
878
Normal
0.0
384
Normal
0.0
187
Tumor
0.0
778
Normal
0.0
312
Normal
0.0
924
Normal
0.0
415
Tumor
0.0
665
Tumor
0.0
478
Normal
0.0
617
Tumor
-0.1
785
Tumor
-0.1
136
Normal
-0.1
342
Normal
-0.1
148
Normal
-0.1
636
Normal
-0.1
858
Normal
-0.1
146
Normal
-0.1
124
Normal
-0.1
354
Normal
-0.1
344
Normal
-0.1
192
Normal
-0.1
444
Normal
-0.1
696
Normal
-0.1
943
Tumor
-0.1
447
Tumor
-0.1
386
Normal
-0.2
497
Tumor
-0.2
814
Normal
-0.2
573
Tumor
-0.2
1014
Normal
-0.2
487
Tumor
-0.2
352
Normal
-0.2
744
Normal
-0.2
641
Tumor
-0.2
363
Tumor
-0.2
493
Tumor
-0.2
647
Tumor
-0.2
357
Tumor
-0.2
777
Tumor
-0.2
535
Tumor
-0.2
355
Tumor
-0.3
423
Tumor
-0.3
311
Tumor
-0.3
231
Tumor
-0.3
125
Tumor
-0.3
911
Tumor
-0.3
923
Tumor
-0.4
823
Tumor
-0.4
713
Tumor
-0.4
277
Tumor
-0.4
483
Tumor
-0.4
818
Normal
-0.4
297
Tumor
-0.4
267
Tumor
-0.4
221
Tumor
-0.5
883
Tumor
-0.5
538
Normal
-0.5
967
Tumor
-0.5
387
Tumor
-0.5
635
Tumor
-0.5
285
Tumor
-0.5
393
Tumor
-0.5
863
Tumor
-0.5
545
Tumor
-0.5
283
Tumor
-0.5
411
Tumor
-0.5
975
Tumor
-0.5
697
Tumor
-0.5
161
Tumor
-0.5
112
Tumor
-0.6
671
Tumor
-0.6
977
Tumor
-0.6
343
Tumor
-0.6
471
Tumor
-0.6
375
Tumor
-0.6
737
Tumor
-0.6
135
Tumor
-0.6
523
Tumor
-0.6
527
Tumor
-0.6
385
Tumor
-0.6
445
Tumor
-0.6
1021
Tumor
-0.7
227
Tumor
-0.7
877
Tumor
-0.7
1041
Tumor
-0.7
695
Tumor
-0.8
983
Tumor
-0.8
663
Tumor
-0.8
473
Tumor
-0.8
965
Tumor
-0.8
1025
Tumor
-0.8
963
Tumor
-0.8
715
Tumor
-0.8
413
Tumor
-0.9
741
Tumor
-0.9
367
Tumor
-0.9
921
Tumor
-0.9
881
Tumor
-0.9
331
Tumor
-0.9
463
Tumor
-1.0
431
Tumor
-1.1
271
Tumor
-1.1
813
Tumor
-1.2
425
Tumor
-1.2
553
Tumor
-1.2
815
Tumor
-1.2
1013
Tumor
-1.2
351
Tumor
-1.3
743
Tumor
-1.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
