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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STYXL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
84.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
77.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
66.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
58.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
49.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
38.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
36.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
36.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
36.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
35.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
32.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
32.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
32.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
31.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
27.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
26.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
25.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
25.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
25.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
24.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
22.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STYXL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
59.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
56.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
54.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
51.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
46.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
41.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
39.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
39.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
36.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
34.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
32.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
32.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
31.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
30.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
28.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
28.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
27.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
27.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
26.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
25.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
25.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
22.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
22.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
22.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
22.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
21.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
21.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
20.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
18.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
17.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
16.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
15.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
13.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
12.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
11.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
9.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
8.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
8.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
6.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STYXL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
32.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
26.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
22.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
21.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
9.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
9.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
9.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
9.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
9.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
9.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
8.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
8.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
8.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
8.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
7.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
6.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
6.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
5.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
5.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STYXL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
86.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
68.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
61.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
58.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
56.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
54.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
54.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
53.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
50.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
50.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
49.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
49.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
48.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
47.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
47.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
46.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
45.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
45.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
45.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
44.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
43.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
43.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
42.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
42.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
42.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
40.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
40.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
39.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
37.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
37.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
36.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
35.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
35.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
34.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
34.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
34.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
33.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
33.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
32.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
31.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
31.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
30.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
30.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
30.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
30.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
30.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
30.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
29.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
29.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
29.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
29.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
28.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
28.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
27.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
27.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
27.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
26.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
26.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
25.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
25.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
24.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
24.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
22.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
22.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
22.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
21.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
21.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
20.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
19.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
18.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
18.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
18.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
16.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
15.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
13.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
12.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
8.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
