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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TICAM1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
47.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
42.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
35.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
35.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
32.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
32.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
31.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
31.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
30.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
30.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
29.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
29.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
29.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
28.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
27.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
26.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
26.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
25.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
25.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
24.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
24.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
24.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
23.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
22.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
22.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
22.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
22.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
21.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
21.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
21.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
21.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
21.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
21.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
21.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
20.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
19.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
19.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
19.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
19.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
19.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
18.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
18.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
17.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
17.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
17.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
17.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
16.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
16.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
16.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
16.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
15.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
15.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
15.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
15.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
14.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
14.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
14.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
14.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
14.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
14.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
14.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
14.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
14.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
13.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
13.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
13.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
12.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
12.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
12.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
12.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
12.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
10.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
10.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
10.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
9.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
9.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
9.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
9.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
9.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
8.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
8.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
7.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
5.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
5.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
5.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TICAM1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
231
Samples
Sample
Description
TPM
DO45301
0 years, male, NA, stage:2, dead, 1440 days
39.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
35.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
34.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
32.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
28.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
26.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
23.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
21.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
20.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
19.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
19.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
17.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
16.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
16.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
15.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
14.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
14.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
13.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
13.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
12.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
12.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
11.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
11.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
11.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
10.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
10.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
10.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
10.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
9.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
8.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
8.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
6.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
6.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
6.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
5.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
5.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
4.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
3.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
3.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
3.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
2.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
2.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
2.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
436
Normal
1.8
434
Normal
1.7
446
Normal
1.5
432
Normal
1.1
444
Normal
1.0
445
Tumor
1.0
515
Tumor
0.9
966
Normal
0.9
967
Tumor
0.9
527
Tumor
0.8
433
Tumor
0.8
327
Tumor
0.8
493
Tumor
0.8
976
Normal
0.8
484
Normal
0.7
431
Tumor
0.7
411
Tumor
0.7
553
Tumor
0.7
331
Tumor
0.7
488
Normal
0.6
965
Tumor
0.6
956
Normal
0.6
328
Normal
0.6
963
Tumor
0.6
355
Tumor
0.5
443
Tumor
0.5
435
Tumor
0.5
533
Tumor
0.5
277
Tumor
0.5
937
Tumor
0.5
516
Normal
0.5
332
Normal
0.5
113
Tumor
0.4
132
Normal
0.4
545
Tumor
0.4
943
Tumor
0.4
518
Normal
0.3
136
Normal
0.3
953
Tumor
0.3
313
Tumor
0.3
1041
Tumor
0.3
1028
Normal
0.3
416
Normal
0.3
138
Normal
0.3
297
Tumor
0.3
415
Tumor
0.3
525
Tumor
0.3
968
Normal
0.3
944
Normal
0.3
414
Normal
0.3
1027
Tumor
0.3
146
Normal
0.3
526
Normal
0.3
142
Normal
0.2
1042
Normal
0.2
364
Normal
0.2
412
Normal
0.2
938
Normal
0.2
951
Tumor
0.2
955
Tumor
0.2
1025
Tumor
0.2
422
Normal
0.2
1026
Normal
0.2
492
Normal
0.2
278
Normal
0.2
1032
Normal
0.2
424
Normal
0.2
356
Normal
0.2
957
Tumor
0.2
483
Tumor
0.2
975
Tumor
0.2
498
Normal
0.2
363
Tumor
0.2
538
Normal
0.1
487
Tumor
0.1
314
Normal
0.1
1031
Tumor
0.1
145
Tumor
0.1
954
Normal
0.1
528
Normal
0.1
423
Tumor
0.1
964
Normal
0.1
517
Tumor
0.1
513
Tumor
0.1
312
Normal
0.1
428
Normal
0.1
494
Normal
0.1
1021
Tumor
0.1
426
Normal
0.1
523
Tumor
0.1
952
Normal
0.0
534
Normal
0.0
137
Tumor
0.0
427
Tumor
0.0
413
Tumor
0.0
141
Tumor
0.0
131
Tumor
0.0
546
Normal
0.0
124
Normal
0.0
497
Tumor
-0.1
1022
Normal
-0.1
298
Normal
-0.1
958
Normal
-0.1
514
Normal
-0.1
128
Normal
-0.1
311
Tumor
-0.1
125
Tumor
-0.1
554
Normal
-0.1
126
Normal
-0.1
114
Normal
-0.2
135
Tumor
-0.2
421
Tumor
-0.2
524
Normal
-0.3
111
Normal
-0.3
537
Tumor
-0.3
491
Tumor
-0.5
123
Tumor
-0.5
425
Tumor
-0.5
112
Tumor
-0.5
127
Tumor
-0.6
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
354
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
721
Tumor
N/A
722
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
785
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
448
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
