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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRRC61 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
36.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
27.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
26.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
21.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
18.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRRC61 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
90.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
61.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
57.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
52.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
48.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
48.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
46.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
45.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
42.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
41.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
39.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
38.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
37.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
37.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
35.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
35.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
34.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
34.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
31.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
28.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
26.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
22.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
20.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
19.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
16.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
16.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
16.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
14.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
11.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
11.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
10.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
10.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
9.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
9.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
9.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
8.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
8.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
7.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
7.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
6.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
6.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
6.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
6.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
6.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
5.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
5.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
5.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
5.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
4.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
3.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
3.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
3.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
3.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRRC61 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
138.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
56.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
47.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
44.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
44.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
42.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
36.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
33.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
33.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
26.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
23.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
22.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
22.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
11.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
10.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
10.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
9.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
8.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
6.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
5.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRRC61 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
107.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
104.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
100.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
92.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
87.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
79.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
79.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
77.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
77.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
75.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
74.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
73.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
71.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
71.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
69.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
69.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
67.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
66.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
64.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
62.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
61.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
60.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
60.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
59.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
57.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
55.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
55.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
55.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
55.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
54.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
53.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
53.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
53.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
52.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
51.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
51.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
51.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
51.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
50.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
50.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
49.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
48.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
48.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
48.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
48.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
48.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
47.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
47.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
47.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
46.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
46.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
46.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
45.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
45.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
45.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
45.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
44.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
44.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
44.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
43.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
42.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
42.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
41.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
41.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
40.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
40.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
40.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
39.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
38.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
38.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
37.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
37.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
37.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
36.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
36.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
36.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
36.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
35.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
35.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
35.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
35.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
34.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
34.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
34.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
34.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
34.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
33.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
33.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
33.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
33.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
31.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
31.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
31.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
31.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
30.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
30.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
30.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
29.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
29.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
29.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
28.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
27.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
25.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
25.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
24.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
24.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
24.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
24.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
21.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
21.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
7.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
7.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
