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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
19.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
10.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
8.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
45.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
24.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
24.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
21.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
20.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
20.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
19.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
19.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
19.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
17.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
15.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
11.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
10.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
8.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
8.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
8.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
7.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
6.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
5.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
5.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
27.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
27.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
12.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
10.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
9.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
8.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
5.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
70.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
52.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
41.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
40.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
35.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
34.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
34.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
33.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
29.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
28.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
26.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
25.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
24.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
20.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
19.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
18.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
18.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
17.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
15.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
10.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
9.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
0.9
CPT0025110003
Tumor
0.8
CPT0078830003
Tumor
0.8
CPT0079270003
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0012370003
Tumor
0.7
CPT0000640003
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0065870003
Tumor
0.6
CPT0026410003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0079230003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0077490003
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0086820003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0078840001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0088920001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0025610001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0063320003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0024670003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0077310003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0069160003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0069190001
Normal
-0.4
CPT0023690003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0012080003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0024680001
Normal
-0.6
CPT0025290003
Tumor
-0.6
CPT0006630003
Tumor
-0.7
CPT0086030003
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0021240003
Tumor
-0.8
CPT0081880003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
