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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF384 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
58.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
57.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
49.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
41.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
40.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
40.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
34.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
33.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
33.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
31.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
30.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
30.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
30.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
26.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
26.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
26.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
26.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
26.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
25.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
25.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
25.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
25.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
24.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
23.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
22.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
22.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
22.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
21.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
21.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
21.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
20.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
19.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
18.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
18.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
18.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
18.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
17.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
17.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
17.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
17.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
16.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
16.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
16.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
16.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
16.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
16.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
16.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
16.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
16.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
15.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
15.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
15.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
15.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
15.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
15.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
15.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
15.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
15.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
15.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
14.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
14.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
14.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
13.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
13.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
13.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
13.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
12.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
12.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
12.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
12.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
11.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
11.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
11.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
11.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
10.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
10.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
10.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
8.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
8.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
8.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF384 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.5
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
47.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
44.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
37.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
36.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
32.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
30.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
30.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
29.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
27.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
27.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
27.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
26.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
25.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
24.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
23.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
23.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
23.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
23.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
23.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
22.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
21.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
21.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
21.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
21.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
20.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
20.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
19.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
19.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
18.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
18.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
17.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
17.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
17.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
17.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
17.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
17.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
16.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
16.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
15.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
15.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
15.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
15.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
15.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
15.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
14.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
14.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
14.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
14.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
13.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
13.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
13.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
13.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
13.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
13.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
13.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
12.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
12.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
12.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
11.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
11.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
10.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
10.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
10.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
9.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
9.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
7.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
574
Normal
1.5
545
Tumor
1.0
965
Tumor
0.9
211
Tumor
0.9
573
Tumor
0.8
877
Tumor
0.8
411
Tumor
0.8
567
Tumor
0.8
563
Tumor
0.8
385
Tumor
0.8
367
Tumor
0.8
568
Normal
0.7
917
Tumor
0.7
425
Tumor
0.7
557
Tumor
0.7
661
Tumor
0.7
375
Tumor
0.7
957
Tumor
0.7
663
Tumor
0.7
267
Tumor
0.7
647
Tumor
0.6
1013
Tumor
0.6
313
Tumor
0.6
258
Normal
0.6
737
Tumor
0.6
572
Normal
0.6
523
Tumor
0.6
331
Tumor
0.6
351
Tumor
0.5
564
Normal
0.5
671
Tumor
0.5
963
Tumor
0.5
558
Normal
0.5
355
Tumor
0.5
112
Tumor
0.5
231
Tumor
0.5
571
Tumor
0.5
283
Tumor
0.5
473
Tumor
0.5
285
Tumor
0.5
311
Tumor
0.5
431
Tumor
0.5
951
Tumor
0.5
535
Tumor
0.5
858
Normal
0.5
865
Tumor
0.5
455
Tumor
0.5
975
Tumor
0.4
467
Tumor
0.4
743
Tumor
0.4
415
Tumor
0.4
983
Tumor
0.4
695
Tumor
0.4
138
Normal
0.4
387
Tumor
0.4
943
Tumor
0.4
527
Tumor
0.4
818
Normal
0.4
413
Tumor
0.4
192
Normal
0.4
132
Normal
0.4
213
Tumor
0.4
342
Normal
0.4
665
Tumor
0.4
217
Tumor
0.4
1041
Tumor
0.4
926
Normal
0.4
136
Normal
0.4
297
Tumor
0.3
191
Tumor
0.3
536
Normal
0.3
922
Normal
0.3
814
Normal
0.3
268
Normal
0.3
857
Tumor
0.3
393
Tumor
0.3
423
Tumor
0.3
1045
Tumor
0.3
958
Normal
0.3
463
Tumor
0.3
715
Tumor
0.3
277
Tumor
0.3
312
Normal
0.3
824
Normal
0.3
685
Tumor
0.3
967
Tumor
0.3
261
Tumor
0.3
635
Tumor
0.3
977
Tumor
0.3
427
Tumor
0.3
937
Tumor
0.3
383
Tumor
0.3
354
Normal
0.3
553
Tumor
0.3
391
Tumor
0.3
223
Tumor
0.3
533
Tumor
0.3
923
Tumor
0.3
161
Tumor
0.3
727
Tumor
0.3
185
Tumor
0.2
697
Tumor
0.2
358
Normal
0.2
357
Tumor
0.2
525
Tumor
0.2
262
Normal
0.2
131
Tumor
0.2
343
Tumor
0.2
976
Normal
0.2
672
Normal
0.2
1015
Tumor
0.2
524
Normal
0.2
146
Normal
0.2
444
Normal
0.2
171
Tumor
0.2
451
Tumor
0.2
478
Normal
0.2
964
Normal
0.2
447
Tumor
0.2
272
Normal
0.2
135
Tumor
0.2
924
Normal
0.2
493
Tumor
0.2
918
Normal
0.2
142
Normal
0.2
686
Normal
0.2
813
Tumor
0.2
641
Tumor
0.2
916
Normal
0.2
433
Tumor
0.2
212
Normal
0.2
145
Tumor
0.2
352
Normal
0.2
756
Normal
0.2
221
Tumor
0.2
538
Normal
0.2
1042
Normal
0.2
724
Normal
0.2
912
Normal
0.2
515
Tumor
0.2
298
Normal
0.2
881
Tumor
0.2
636
Normal
0.1
716
Normal
0.1
113
Tumor
0.1
224
Normal
0.1
435
Tumor
0.1
884
Normal
0.1
1032
Normal
0.1
1031
Tumor
0.1
386
Normal
0.1
1026
Normal
0.1
492
Normal
0.1
516
Normal
0.1
618
Normal
0.1
966
Normal
0.1
497
Tumor
0.1
344
Normal
0.1
392
Normal
0.1
126
Normal
0.1
744
Normal
0.1
534
Normal
0.1
477
Tumor
0.1
777
Tumor
0.1
546
Normal
0.1
227
Tumor
0.1
785
Tumor
0.1
123
Tumor
0.1
186
Normal
0.1
628
Normal
0.1
195
Tumor
0.1
314
Normal
0.1
421
Tumor
0.1
882
Normal
0.1
395
Tumor
0.1
513
Tumor
0.1
188
Normal
0.1
396
Normal
0.1
537
Tumor
0.1
721
Tumor
0.1
271
Tumor
0.1
278
Normal
0.1
187
Tumor
0.1
332
Normal
0.1
984
Normal
0.1
816
Normal
0.1
741
Tumor
0.1
284
Normal
0.1
883
Tumor
0.1
432
Normal
0.1
616
Normal
0.1
1025
Tumor
0.1
232
Normal
0.1
364
Normal
0.1
148
Normal
0.1
1016
Normal
0.1
1043
Tumor
0.0
434
Normal
0.0
388
Normal
0.0
982
Normal
0.0
141
Tumor
0.0
554
Normal
0.0
471
Tumor
0.0
938
Normal
0.0
465
Tumor
0.0
341
Tumor
0.0
517
Tumor
0.0
456
Normal
0.0
778
Normal
0.0
852
Normal
0.0
461
Tumor
0.0
483
Tumor
0.0
114
Normal
0.0
1021
Tumor
0.0
968
Normal
0.0
1014
Normal
0.0
328
Normal
0.0
1044
Normal
0.0
978
Normal
0.0
498
Normal
0.0
172
Normal
0.0
873
Tumor
0.0
137
Tumor
0.0
412
Normal
0.0
642
Normal
0.0
722
Normal
0.0
481
Tumor
0.0
664
Normal
0.0
218
Normal
0.0
462
Normal
0.0
356
Normal
0.0
488
Normal
0.0
124
Normal
0.0
353
Tumor
0.0
1028
Normal
0.0
162
Normal
0.0
394
Normal
0.0
426
Normal
0.0
468
Normal
0.0
786
Normal
0.0
952
Normal
0.0
913
Tumor
0.0
363
Tumor
0.0
464
Normal
-0.1
944
Normal
-0.1
815
Tumor
-0.1
147
Tumor
-0.1
956
Normal
-0.1
954
Normal
-0.1
127
Tumor
-0.1
228
Normal
-0.1
714
Normal
-0.1
384
Normal
-0.1
196
Normal
-0.1
518
Normal
-0.1
698
Normal
-0.1
414
Normal
-0.1
494
Normal
-0.1
528
Normal
-0.1
214
Normal
-0.1
1046
Normal
-0.1
615
Tumor
-0.1
921
Tumor
-0.1
443
Tumor
-0.1
617
Tumor
-0.1
448
Normal
-0.1
491
Tumor
-0.1
955
Tumor
-0.1
915
Tumor
-0.1
878
Normal
-0.1
713
Tumor
-0.1
514
Normal
-0.1
863
Tumor
-0.1
466
Normal
-0.1
428
Normal
-0.1
472
Normal
-0.1
914
Normal
-0.1
482
Normal
-0.1
445
Tumor
-0.2
424
Normal
-0.2
1027
Tumor
-0.2
925
Tumor
-0.2
257
Tumor
-0.2
627
Tumor
-0.2
953
Tumor
-0.2
416
Normal
-0.2
864
Normal
-0.2
728
Normal
-0.2
484
Normal
-0.2
1022
Normal
-0.2
817
Tumor
-0.2
327
Tumor
-0.2
361
Tumor
-0.2
422
Normal
-0.2
128
Normal
-0.2
125
Tumor
-0.2
696
Normal
-0.2
746
Normal
-0.2
526
Normal
-0.2
365
Tumor
-0.2
911
Tumor
-0.2
662
Normal
-0.2
366
Normal
-0.3
874
Normal
-0.3
222
Normal
-0.3
666
Normal
-0.3
452
Normal
-0.3
738
Normal
-0.3
286
Normal
-0.3
861
Tumor
-0.3
742
Normal
-0.3
866
Normal
-0.3
851
Tumor
-0.3
446
Normal
-0.3
981
Tumor
-0.4
867
Tumor
-0.4
868
Normal
-0.4
723
Tumor
-0.4
755
Tumor
-0.4
487
Tumor
-0.4
362
Normal
-0.4
436
Normal
-0.4
111
Normal
-0.4
648
Normal
-0.4
376
Normal
-0.4
745
Tumor
-0.5
474
Normal
-0.5
862
Normal
-0.5
823
Tumor
-0.6
368
Normal
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
