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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
0.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
0.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
0.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
0.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
0.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
0.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
0.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
0.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
0.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
0.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
0.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
0.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
0.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
0.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
0.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
0.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
0.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
0.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
0.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
0.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
0.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
0.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
0.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
0.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
0.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
0.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
0.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
0.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
0.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
0.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
0.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
0.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
0.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
0.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
0.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
0.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
0.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
0.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
0.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
0.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
0.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
0.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
0.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
0.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
0.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
0.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
0.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
0.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
0.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
0.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
0.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
0.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
0.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
0.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
0.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
0.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
0.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
0.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
0.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
0.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
0.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
0.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
0.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
0.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
0.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
0.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
0.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
0.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
0.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
0.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
0.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
0.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
0.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
0.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
0.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
0.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
0.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
0.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
0.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
0.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
0.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
0.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
0.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
0.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
0.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
0.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
0.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
0.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
0.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
0.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
0.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
0.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
0.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
0.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
0.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
0.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
0.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
0.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
0.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
0.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
0.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
0.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
0.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
0.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
0.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
0.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
0.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
0.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
0.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.0
Number of samples
231
Samples
Sample
Description
TPM
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
0.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
0.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
0.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
0.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
0.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
0.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
0.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
0.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
0.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
0.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
0.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
0.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
0.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
0.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
0.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
0.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
0.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
0.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
0.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
0.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
0.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
0.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
0.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
0.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
0.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
0.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
0.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
0.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
0.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
0.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
0.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
0.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
0.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
0.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
0.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
0.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
0.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
0.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
0.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
0.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
0.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
0.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
0.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
0.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
0.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
0.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
0.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
0.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
0.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
0.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
0.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
0.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
0.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
0.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
0.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
0.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
0.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
0.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
0.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
0.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
0.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
0.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
0.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
0.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
0.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
0.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
0.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
0.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
0.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
0.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
0.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
0.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
0.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
0.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
0.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
0.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
0.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
0.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
0.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
0.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
0.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
0.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
0.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
0.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
0.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
0.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
0.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
0.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
0.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
0.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
0.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
0.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
0.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
0.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
0.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
0.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
0.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
0.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
0.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
0.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
0.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
0.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
0.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
0.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
0.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
0.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
0.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
0.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
0.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
0.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
0.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
2.7
311
Tumor
1.8
745
Tumor
1.7
877
Tumor
1.7
943
Tumor
1.5
513
Tumor
1.4
884
Normal
1.4
755
Tumor
1.4
1032
Normal
1.3
873
Tumor
1.3
1043
Tumor
1.3
1028
Normal
1.3
863
Tumor
1.2
817
Tumor
1.1
492
Normal
1.1
538
Normal
1.0
925
Tumor
1.0
327
Tumor
1.0
746
Normal
1.0
937
Tumor
1.0
478
Normal
1.0
554
Normal
1.0
868
Normal
0.9
444
Normal
0.9
395
Tumor
0.9
866
Normal
0.9
533
Tumor
0.9
975
Tumor
0.9
874
Normal
0.9
955
Tumor
0.8
527
Tumor
0.8
861
Tumor
0.8
498
Normal
0.8
534
Normal
0.8
514
Normal
0.8
268
Normal
0.8
515
Tumor
0.8
864
Normal
0.8
1031
Tumor
0.8
917
Tumor
0.8
956
Normal
0.8
284
Normal
0.8
328
Normal
0.7
883
Tumor
0.7
852
Normal
0.7
524
Normal
0.7
778
Normal
0.7
462
Normal
0.7
363
Tumor
0.7
824
Normal
0.7
616
Normal
0.7
477
Tumor
0.7
494
Normal
0.7
938
Normal
0.7
816
Normal
0.7
957
Tumor
0.6
976
Normal
0.6
1027
Tumor
0.6
916
Normal
0.6
715
Tumor
0.6
516
Normal
0.6
553
Tumor
0.6
627
Tumor
0.6
528
Normal
0.6
1022
Normal
0.6
722
Normal
0.6
954
Normal
0.6
756
Normal
0.6
944
Normal
0.6
786
Normal
0.6
686
Normal
0.6
924
Normal
0.6
815
Tumor
0.6
558
Normal
0.5
728
Normal
0.5
212
Normal
0.5
737
Tumor
0.5
546
Normal
0.5
572
Normal
0.5
914
Normal
0.5
474
Normal
0.5
696
Normal
0.5
388
Normal
0.5
878
Normal
0.5
984
Normal
0.5
738
Normal
0.5
966
Normal
0.5
982
Normal
0.5
364
Normal
0.5
1042
Normal
0.5
484
Normal
0.5
741
Tumor
0.5
392
Normal
0.5
958
Normal
0.5
926
Normal
0.5
882
Normal
0.5
368
Normal
0.5
918
Normal
0.4
376
Normal
0.4
355
Tumor
0.4
911
Tumor
0.4
716
Normal
0.4
952
Normal
0.4
526
Normal
0.4
142
Normal
0.4
128
Normal
0.4
785
Tumor
0.4
314
Normal
0.4
818
Normal
0.4
857
Tumor
0.4
228
Normal
0.4
278
Normal
0.4
188
Normal
0.4
518
Normal
0.4
356
Normal
0.4
721
Tumor
0.4
1014
Normal
0.4
412
Normal
0.4
415
Tumor
0.4
1016
Normal
0.3
922
Normal
0.3
396
Normal
0.3
362
Normal
0.3
416
Normal
0.3
968
Normal
0.3
921
Tumor
0.3
564
Normal
0.3
472
Normal
0.3
714
Normal
0.3
224
Normal
0.3
137
Tumor
0.3
1021
Tumor
0.3
981
Tumor
0.3
367
Tumor
0.3
964
Normal
0.3
823
Tumor
0.3
488
Normal
0.3
136
Normal
0.2
978
Normal
0.2
312
Normal
0.2
695
Tumor
0.2
867
Tumor
0.2
977
Tumor
0.2
858
Normal
0.2
881
Tumor
0.2
332
Normal
0.2
286
Normal
0.2
617
Tumor
0.2
536
Normal
0.2
563
Tumor
0.2
172
Normal
0.2
1015
Tumor
0.2
574
Normal
0.2
482
Normal
0.2
394
Normal
0.1
423
Tumor
0.1
813
Tumor
0.1
261
Tumor
0.1
497
Tumor
0.1
365
Tumor
0.1
724
Normal
0.1
698
Normal
0.1
983
Tumor
0.1
387
Tumor
0.1
384
Normal
0.1
913
Tumor
0.1
352
Normal
0.1
1026
Normal
0.1
723
Tumor
0.1
814
Normal
0.1
448
Normal
0.1
851
Tumor
0.1
452
Normal
0.1
777
Tumor
0.1
162
Normal
0.1
386
Normal
0.1
138
Normal
0.1
923
Tumor
0.1
912
Normal
0.1
628
Normal
0.0
258
Normal
0.0
131
Tumor
0.0
221
Tumor
0.0
1025
Tumor
0.0
915
Tumor
0.0
132
Normal
0.0
461
Tumor
0.0
491
Tumor
0.0
232
Normal
0.0
393
Tumor
0.0
545
Tumor
0.0
272
Normal
0.0
493
Tumor
0.0
618
Normal
0.0
424
Normal
0.0
615
Tumor
0.0
391
Tumor
0.0
1046
Normal
0.0
366
Normal
0.0
455
Tumor
0.0
465
Tumor
-0.1
262
Normal
-0.1
1044
Normal
-0.1
135
Tumor
-0.1
187
Tumor
-0.1
464
Normal
-0.1
481
Tumor
-0.1
148
Normal
-0.1
517
Tumor
-0.1
471
Tumor
-0.1
865
Tumor
-0.1
298
Normal
-0.1
126
Normal
-0.1
742
Normal
-0.1
862
Normal
-0.1
341
Tumor
-0.1
428
Normal
-0.1
425
Tumor
-0.1
186
Normal
-0.1
195
Tumor
-0.1
358
Normal
-0.1
523
Tumor
-0.1
635
Tumor
-0.1
642
Normal
-0.2
222
Normal
-0.2
573
Tumor
-0.2
697
Tumor
-0.2
146
Normal
-0.2
662
Normal
-0.2
145
Tumor
-0.2
214
Normal
-0.2
414
Normal
-0.2
426
Normal
-0.2
568
Normal
-0.2
636
Normal
-0.2
1045
Tumor
-0.2
557
Tumor
-0.2
671
Tumor
-0.2
436
Normal
-0.2
468
Normal
-0.2
664
Normal
-0.3
344
Normal
-0.3
466
Normal
-0.3
672
Normal
-0.3
354
Normal
-0.3
375
Tumor
-0.3
192
Normal
-0.3
641
Tumor
-0.3
535
Tumor
-0.3
963
Tumor
-0.3
451
Tumor
-0.3
648
Normal
-0.3
483
Tumor
-0.3
422
Normal
-0.3
443
Tumor
-0.3
361
Tumor
-0.3
967
Tumor
-0.3
744
Normal
-0.3
525
Tumor
-0.3
147
Tumor
-0.3
413
Tumor
-0.3
446
Normal
-0.4
112
Tumor
-0.4
171
Tumor
-0.4
124
Normal
-0.4
383
Tumor
-0.4
196
Normal
-0.4
447
Tumor
-0.4
1013
Tumor
-0.4
421
Tumor
-0.4
213
Tumor
-0.4
217
Tumor
-0.4
713
Tumor
-0.4
411
Tumor
-0.4
432
Normal
-0.4
185
Tumor
-0.4
231
Tumor
-0.5
965
Tumor
-0.5
456
Normal
-0.5
111
Normal
-0.5
285
Tumor
-0.5
567
Tumor
-0.5
666
Normal
-0.5
385
Tumor
-0.5
571
Tumor
-0.5
433
Tumor
-0.6
953
Tumor
-0.6
1041
Tumor
-0.6
297
Tumor
-0.6
271
Tumor
-0.6
127
Tumor
-0.6
331
Tumor
-0.7
434
Normal
-0.7
114
Normal
-0.7
951
Tumor
-0.7
218
Normal
-0.7
353
Tumor
-0.7
283
Tumor
-0.8
123
Tumor
-0.8
277
Tumor
-0.8
342
Normal
-0.8
431
Tumor
-0.8
191
Tumor
-0.8
727
Tumor
-0.8
227
Tumor
-0.9
467
Tumor
-0.9
665
Tumor
-0.9
223
Tumor
-1.0
647
Tumor
-1.0
141
Tumor
-1.0
537
Tumor
-1.0
267
Tumor
-1.0
113
Tumor
-1.0
351
Tumor
-1.0
257
Tumor
-1.0
473
Tumor
-1.0
357
Tumor
-1.1
463
Tumor
-1.1
211
Tumor
-1.1
435
Tumor
-1.2
313
Tumor
-1.2
487
Tumor
-1.2
161
Tumor
-1.3
427
Tumor
-1.4
445
Tumor
-1.4
343
Tumor
-1.4
743
Tumor
-1.4
125
Tumor
-1.8
661
Tumor
-1.9
663
Tumor
-2.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.