We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBA2 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
157.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
138.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
129.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
112.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
101.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
99.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
90.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
78.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
77.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
73.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
71.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
68.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
68.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
64.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
63.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
63.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
61.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
60.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
60.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
60.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
55.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
54.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
53.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
52.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
52.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
51.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
50.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
50.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
50.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
50.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
49.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
49.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
49.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
49.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
48.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
48.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
46.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
46.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
45.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
45.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
45.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
44.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
43.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
43.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
43.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
43.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
42.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
42.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
42.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
41.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
41.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
40.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
40.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
40.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
40.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
39.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
39.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
39.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
39.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
39.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
38.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
38.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
38.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
37.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
37.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
37.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
37.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
37.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
36.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
36.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
36.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
36.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
36.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
36.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
35.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
35.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
35.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
35.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
34.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
34.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
34.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
33.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
33.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
33.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
33.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
33.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
33.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
33.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
33.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
32.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
32.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
32.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
32.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
32.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
31.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
31.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
31.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
31.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
31.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
31.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
31.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
31.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
31.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
31.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
30.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
30.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
30.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
30.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
30.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
30.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
30.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
29.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
29.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
29.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
29.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
29.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
28.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
28.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
28.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
28.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
28.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
28.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
28.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
28.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
28.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
28.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
28.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
28.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
28.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
27.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
27.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
27.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
27.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
27.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
27.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
27.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
27.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
27.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
27.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
27.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
27.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
27.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
27.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
26.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
26.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
26.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
26.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
26.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
26.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
26.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
25.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
25.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
25.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
25.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
25.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
25.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
25.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
25.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
25.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
24.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
24.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
24.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
24.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
24.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
24.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
24.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
24.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
23.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
23.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
23.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
23.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
23.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
23.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
23.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
23.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
23.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
23.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
23.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
23.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
22.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
22.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
22.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
22.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
22.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
22.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
22.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
22.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
21.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
21.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
21.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
21.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
21.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
21.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
21.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
21.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
21.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
20.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
20.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
20.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
20.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
20.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
20.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
20.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
20.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
20.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
20.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
19.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
19.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
19.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
19.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
19.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
19.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
19.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
19.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
18.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
18.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
18.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
18.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
18.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
18.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
18.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
17.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
17.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
17.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
17.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
17.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
17.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
17.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
17.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
17.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
17.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
16.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
16.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
16.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
16.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
16.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
16.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
16.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
15.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
15.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
15.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
15.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
15.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
15.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
15.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
15.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
15.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
15.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
15.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
14.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
14.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
14.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
14.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
13.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
13.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
12.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
12.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
11.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
11.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
10.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
9.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
9.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBA2 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
80.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
75.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
72.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
66.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
66.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
64.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
62.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
61.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
60.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
58.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
57.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
54.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
53.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
53.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
49.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
49.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
48.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
47.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
45.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
45.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
45.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
45.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
45.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
44.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
44.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
44.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
43.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
42.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
42.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
41.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
41.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
40.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
40.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
39.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
39.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
39.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
38.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
38.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
38.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
38.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
37.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
37.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
37.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
37.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
37.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
36.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
36.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
36.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
36.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
36.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
36.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
36.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
35.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
35.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
34.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
34.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
34.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
34.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
34.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
33.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
33.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
33.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
33.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
33.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
32.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
32.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
31.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
31.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
31.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
31.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
30.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
30.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
30.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
30.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
30.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
30.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
30.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
30.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
30.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
30.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
30.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
29.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
29.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
29.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
29.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
29.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
29.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
28.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
28.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
28.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
28.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
28.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
28.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
28.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
27.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
27.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
27.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
27.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
27.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
27.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
27.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
26.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
26.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
26.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
26.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
26.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
26.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
26.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
26.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
26.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
26.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
26.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
25.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
25.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
25.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
25.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
25.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
25.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
25.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
24.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
24.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
24.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
24.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
24.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
23.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
23.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
23.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
23.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
23.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
23.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
23.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
23.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
23.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
23.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
22.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
22.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
22.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
22.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
22.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
22.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
22.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
22.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
22.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
21.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
21.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
21.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
21.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
21.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
20.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
20.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
20.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
20.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
20.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
20.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
20.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
19.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
19.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
19.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
19.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
19.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
19.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
19.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
19.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
19.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
18.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
18.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
18.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
18.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
18.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
18.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
17.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
17.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
17.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
16.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
16.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
16.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
15.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
14.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
14.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
14.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
12.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
11.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
285
Tumor
1.4
425
Tumor
1.3
463
Tumor
1.2
661
Tumor
1.2
967
Tumor
1.1
965
Tumor
1.0
671
Tumor
1.0
567
Tumor
0.9
341
Tumor
0.9
695
Tumor
0.9
497
Tumor
0.8
131
Tumor
0.7
743
Tumor
0.7
387
Tumor
0.7
517
Tumor
0.7
125
Tumor
0.7
443
Tumor
0.7
331
Tumor
0.6
385
Tumor
0.6
351
Tumor
0.6
112
Tumor
0.6
367
Tumor
0.6
487
Tumor
0.6
983
Tumor
0.6
473
Tumor
0.6
815
Tumor
0.6
433
Tumor
0.6
277
Tumor
0.6
957
Tumor
0.5
211
Tumor
0.5
355
Tumor
0.5
1021
Tumor
0.5
545
Tumor
0.5
877
Tumor
0.5
975
Tumor
0.4
231
Tumor
0.4
297
Tumor
0.4
537
Tumor
0.4
647
Tumor
0.4
523
Tumor
0.4
685
Tumor
0.4
573
Tumor
0.4
535
Tumor
0.4
123
Tumor
0.4
427
Tumor
0.4
1031
Tumor
0.3
635
Tumor
0.3
421
Tumor
0.3
363
Tumor
0.3
923
Tumor
0.3
817
Tumor
0.3
283
Tumor
0.3
813
Tumor
0.3
467
Tumor
0.3
141
Tumor
0.3
881
Tumor
0.3
921
Tumor
0.3
865
Tumor
0.3
491
Tumor
0.3
445
Tumor
0.3
343
Tumor
0.3
391
Tumor
0.2
483
Tumor
0.2
963
Tumor
0.2
737
Tumor
0.2
527
Tumor
0.2
393
Tumor
0.2
1013
Tumor
0.2
571
Tumor
0.2
951
Tumor
0.2
431
Tumor
0.2
161
Tumor
0.2
395
Tumor
0.2
271
Tumor
0.2
665
Tumor
0.2
1015
Tumor
0.2
715
Tumor
0.2
375
Tumor
0.2
447
Tumor
0.2
213
Tumor
0.2
851
Tumor
0.2
724
Normal
0.2
313
Tumor
0.2
261
Tumor
0.2
663
Tumor
0.2
943
Tumor
0.1
977
Tumor
0.1
411
Tumor
0.1
444
Normal
0.1
455
Tumor
0.1
361
Tumor
0.1
413
Tumor
0.1
814
Normal
0.1
745
Tumor
0.1
917
Tumor
0.1
697
Tumor
0.1
223
Tumor
0.1
357
Tumor
0.1
785
Tumor
0.1
435
Tumor
0.1
777
Tumor
0.1
127
Tumor
0.1
536
Normal
0.1
217
Tumor
0.0
135
Tumor
0.0
311
Tumor
0.0
451
Tumor
0.0
137
Tumor
0.0
221
Tumor
0.0
227
Tumor
0.0
353
Tumor
0.0
257
Tumor
0.0
493
Tumor
0.0
1025
Tumor
0.0
713
Tumor
0.0
477
Tumor
0.0
937
Tumor
0.0
471
Tumor
0.0
461
Tumor
0.0
384
Normal
0.0
185
Tumor
0.0
953
Tumor
0.0
267
Tumor
0.0
883
Tumor
0.0
383
Tumor
0.0
147
Tumor
0.0
192
Normal
0.0
981
Tumor
0.0
641
Tumor
-0.1
268
Normal
-0.1
721
Tumor
-0.1
1041
Tumor
-0.1
666
Normal
-0.1
465
Tumor
-0.1
478
Normal
-0.1
314
Normal
-0.1
538
Normal
-0.1
278
Normal
-0.1
492
Normal
-0.1
187
Tumor
-0.1
146
Normal
-0.1
563
Tumor
-0.1
744
Normal
-0.1
1043
Tumor
-0.1
332
Normal
-0.1
298
Normal
-0.1
533
Tumor
-0.1
727
Tumor
-0.1
191
Tumor
-0.1
524
Normal
-0.1
498
Normal
-0.1
434
Normal
-0.1
672
Normal
-0.1
823
Tumor
-0.1
481
Tumor
-0.1
171
Tumor
-0.1
423
Tumor
-0.1
553
Tumor
-0.2
342
Normal
-0.2
224
Normal
-0.2
262
Normal
-0.2
557
Tumor
-0.2
113
Tumor
-0.2
915
Tumor
-0.2
195
Tumor
-0.2
515
Tumor
-0.2
386
Normal
-0.2
446
Normal
-0.2
232
Normal
-0.2
662
Normal
-0.2
913
Tumor
-0.2
124
Normal
-0.2
525
Tumor
-0.2
312
Normal
-0.2
352
Normal
-0.2
916
Normal
-0.2
1027
Tumor
-0.2
954
Normal
-0.2
976
Normal
-0.2
466
Normal
-0.2
911
Tumor
-0.2
1045
Tumor
-0.2
424
Normal
-0.2
716
Normal
-0.2
188
Normal
-0.2
966
Normal
-0.2
686
Normal
-0.2
344
Normal
-0.2
365
Tumor
-0.2
126
Normal
-0.2
863
Tumor
-0.3
327
Tumor
-0.3
286
Normal
-0.3
456
Normal
-0.3
145
Tumor
-0.3
212
Normal
-0.3
415
Tumor
-0.3
284
Normal
-0.3
488
Normal
-0.3
741
Tumor
-0.3
574
Normal
-0.3
354
Normal
-0.3
627
Tumor
-0.3
664
Normal
-0.3
368
Normal
-0.3
714
Normal
-0.3
272
Normal
-0.3
738
Normal
-0.3
696
Normal
-0.3
388
Normal
-0.3
258
Normal
-0.3
984
Normal
-0.3
136
Normal
-0.3
394
Normal
-0.3
396
Normal
-0.3
648
Normal
-0.3
366
Normal
-0.3
148
Normal
-0.3
228
Normal
-0.3
858
Normal
-0.3
468
Normal
-0.3
464
Normal
-0.3
426
Normal
-0.3
922
Normal
-0.3
968
Normal
-0.3
756
Normal
-0.3
358
Normal
-0.3
958
Normal
-0.3
944
Normal
-0.3
861
Tumor
-0.3
428
Normal
-0.3
918
Normal
-0.3
516
Normal
-0.3
1032
Normal
-0.3
432
Normal
-0.3
926
Normal
-0.3
867
Tumor
-0.3
924
Normal
-0.3
873
Tumor
-0.3
138
Normal
-0.3
132
Normal
-0.3
755
Tumor
-0.3
1044
Normal
-0.3
1016
Normal
-0.3
422
Normal
-0.3
778
Normal
-0.3
484
Normal
-0.3
1014
Normal
-0.4
362
Normal
-0.4
857
Tumor
-0.4
436
Normal
-0.4
617
Tumor
-0.4
878
Normal
-0.4
982
Normal
-0.4
978
Normal
-0.4
392
Normal
-0.4
376
Normal
-0.4
494
Normal
-0.4
114
Normal
-0.4
956
Normal
-0.4
615
Tumor
-0.4
852
Normal
-0.4
142
Normal
-0.4
698
Normal
-0.4
474
Normal
-0.4
952
Normal
-0.4
914
Normal
-0.4
452
Normal
-0.4
412
Normal
-0.4
564
Normal
-0.4
528
Normal
-0.4
518
Normal
-0.4
1046
Normal
-0.4
554
Normal
-0.4
746
Normal
-0.4
722
Normal
-0.4
636
Normal
-0.4
616
Normal
-0.4
572
Normal
-0.4
938
Normal
-0.4
964
Normal
-0.4
214
Normal
-0.4
628
Normal
-0.4
364
Normal
-0.4
568
Normal
-0.4
514
Normal
-0.4
218
Normal
-0.4
818
Normal
-0.4
786
Normal
-0.4
723
Tumor
-0.4
222
Normal
-0.4
414
Normal
-0.4
186
Normal
-0.4
874
Normal
-0.4
618
Normal
-0.4
742
Normal
-0.4
534
Normal
-0.4
448
Normal
-0.4
816
Normal
-0.4
162
Normal
-0.4
728
Normal
-0.4
356
Normal
-0.4
546
Normal
-0.4
128
Normal
-0.4
558
Normal
-0.4
1026
Normal
-0.5
1028
Normal
-0.5
1022
Normal
-0.5
864
Normal
-0.5
1042
Normal
-0.5
824
Normal
-0.5
955
Tumor
-0.5
462
Normal
-0.5
111
Normal
-0.5
642
Normal
-0.5
472
Normal
-0.5
526
Normal
-0.5
912
Normal
-0.5
416
Normal
-0.5
196
Normal
-0.5
884
Normal
-0.5
172
Normal
-0.5
925
Tumor
-0.5
866
Normal
-0.5
862
Normal
-0.5
328
Normal
-0.5
882
Normal
-0.5
513
Tumor
-0.5
868
Normal
-0.6
482
Normal
-0.6
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
