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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CAPNS1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
482.5
Number of samples
349
Samples
Sample
Description
TPM
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1984.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1853.0
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1542.9
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1341.7
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1317.9
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1291.9
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1281.9
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1235.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1228.8
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1169.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1141.5
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1114.6
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1090.8
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1055.4
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1009.6
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
997.3
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
985.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
933.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
930.4
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
904.6
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
891.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
865.8
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
839.4
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
833.6
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
831.8
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
809.1
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
808.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
801.9
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
797.3
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
794.5
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
794.5
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
789.1
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
786.5
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
776.7
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
764.6
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
761.9
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
751.5
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
748.3
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
744.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
743.1
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
742.9
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
733.0
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
711.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
704.4
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
700.0
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
691.1
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
665.3
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
662.7
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
661.3
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
661.0
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
660.3
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
659.4
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
659.2
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
657.5
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
656.8
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
656.6
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
656.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
653.5
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
652.9
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
647.3
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
643.5
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
642.2
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
631.1
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
619.7
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
619.2
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
607.9
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
603.3
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
599.4
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
599.1
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
591.5
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
590.0
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
588.6
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
586.0
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
585.3
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
583.4
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
577.3
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
573.7
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
572.8
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
572.2
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
571.2
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
569.6
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
568.3
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
567.9
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
566.7
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
565.0
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
564.0
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
556.6
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
556.0
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
554.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
554.8
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
554.0
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
552.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
547.1
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
544.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
542.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
540.7
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
533.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
533.7
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
533.4
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
531.4
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
530.4
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
529.9
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
529.8
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
526.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
525.1
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
520.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
518.1
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
516.9
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
515.6
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
514.6
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
514.5
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
514.0
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
510.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
509.1
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
508.9
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
507.7
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
505.4
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
503.5
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
502.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
502.4
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
502.0
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
501.8
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
501.2
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
497.2
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
495.5
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
494.1
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
487.1
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
485.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
484.0
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
483.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
482.9
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
481.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
480.0
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
479.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
479.9
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
479.4
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
477.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
476.5
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
474.1
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
472.6
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
472.1
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
469.6
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
468.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
468.2
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
467.9
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
466.1
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
460.3
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
458.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
458.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
456.6
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
456.4
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
454.8
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
454.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
451.2
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
449.1
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
449.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
445.9
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
438.8
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
437.6
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
436.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
436.1
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
435.4
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
433.9
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
433.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
431.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
430.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
429.9
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
429.4
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
428.3
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
428.0
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
427.8
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
427.8
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
427.6
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
426.1
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
426.0
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
425.3
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
425.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
424.2
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
423.9
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
422.1
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
421.6
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
420.7
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
420.6
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
420.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
419.2
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
416.9
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
416.6
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
416.6
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
416.3
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
415.4
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
414.8
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
412.9
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
412.1
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
408.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
407.5
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
407.0
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
405.9
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
405.5
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
404.7
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
403.3
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
402.8
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
400.4
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
399.5
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
399.1
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
398.6
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
398.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
398.0
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
397.4
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
396.2
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
393.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
390.7
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
390.1
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
389.3
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
387.4
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
387.3
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
387.0
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
384.0
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
381.4
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
379.5
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
378.1
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
377.6
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
376.8
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
374.7
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
374.1
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
373.9
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
373.2
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
372.7
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
372.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
371.8
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
370.9
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
369.9
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
367.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
366.8
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
366.5
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
366.0
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
364.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
362.1
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
361.8
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
361.3
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
360.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
359.6
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
358.8
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
355.7
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
354.5
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
353.8
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
353.4
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
352.4
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
351.9
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
351.6
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
351.1
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
349.3
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
348.8
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
347.9
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
342.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
340.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
338.1
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
337.4
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
334.7
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
334.3
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
331.2
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
331.1
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
330.2
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
330.0
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
328.5
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
327.9
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
327.2
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
325.1
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
322.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
321.8
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
317.9
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
317.1
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
315.7
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
313.9
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
312.3
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
311.5
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
310.8
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
308.9
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
307.9
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
306.5
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
305.9
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
304.9
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
304.8
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
303.8
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
303.2
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
302.2
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
301.3
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
297.0
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
296.2
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
296.0
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
292.4
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
292.0
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
290.3
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
289.6
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
287.2
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
286.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
282.9
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
282.3
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
279.5
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
279.0
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
278.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
278.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
277.2
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
277.1
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
274.9
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
273.0
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
267.8
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
267.8
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
265.2
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
263.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
261.1
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
257.4
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
255.1
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
254.3
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
253.9
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
253.0
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
251.4
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
249.2
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
249.1
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
244.0
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
240.8
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
237.5
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
234.3
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
234.1
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
232.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
232.4
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
230.3
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
227.9
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
225.6
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
225.4
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
222.9
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
215.9
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
215.5
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
213.7
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
210.8
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
208.8
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
205.3
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
205.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
204.7
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
203.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
203.4
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
202.7
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
193.7
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
190.4
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
182.0
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
177.0
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
170.4
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
163.2
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
162.3
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CAPNS1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
297.3
Number of samples
81
Samples
Sample
Description
TPM
DO46396
0 years, female, NA, stage:III, dead, 583 days
1376.6
DO46356
0 years, female, NA, stage:III, dead, 911 days
756.1
DO46350
0 years, female, NA, stage:III, dead, 886 days
747.3
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
729.4
DO46611
0 years, female, NA, stage:III, dead, 734 days
707.4
DO46366
0 years, female, NA, stage:III, dead, 2054 days
701.7
DO46576
0 years, female, NA, stage:III, alive, 133 days
604.0
DO46436
0 years, female, NA, stage:III, alive, 3193 days
563.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
531.6
DO46408
0 years, female, NA, stage:III, dead, 489 days
481.5
DO46538
0 years, female, NA, stage:III, dead, 1527 days
464.2
DO46581
0 years, female, NA, stage:III, dead, 408 days
462.2
DO46333
0 years, female, NA, stage:III, dead, 359 days
456.2
DO46348
0 years, female, NA, stage:IV, dead, 287 days
448.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
446.4
DO46468
0 years, female, NA, stage:III, alive, 2776 days
390.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
372.5
DO46453
0 years, female, NA, stage:III, dead, 3294 days
361.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
359.9
DO46358
0 years, female, NA, stage:III, dead, 423 days
350.6
DO46331
0 years, female, NA, stage:III, dead, 612 days
349.3
DO46376
0 years, female, NA, stage:III, dead, 1430 days
347.7
DO46378
0 years, female, NA, stage:III, alive, 843 days
338.0
DO46342
0 years, female, NA, stage:III, dead, 1398 days
337.4
DO46380
0 years, female, NA, stage:III, dead, 1423 days
313.2
DO46364
0 years, female, NA, stage:III, dead, 806 days
312.5
DO46390
0 years, female, NA, stage:III, dead, 374 days
308.5
DO46346
0 years, female, NA, stage:III, dead, 1187 days
303.0
DO46362
0 years, female, NA, stage:III, dead, 1639 days
300.1
DO46448
0 years, female, NA, stage:III, dead, 654 days
291.0
DO46551
0 years, female, NA, stage:III, dead, 1055 days
290.9
DO46463
0 years, female, NA, stage:III, dead, 2451 days
284.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
274.0
DO46533
0 years, female, NA, stage:III, alive, 3667 days
272.9
DO46372
0 years, female, NA, stage:III, dead, 1326 days
259.4
DO46330
0 years, female, NA, stage:III, dead, 684 days
252.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
251.6
DO46338
0 years, female, NA, stage:III, dead, 596 days
250.6
DO46398
0 years, female, NA, stage:III, alive, 437 days
249.2
DO46382
0 years, female, NA, stage:IV, dead, 311 days
247.7
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
243.8
DO46352
0 years, female, NA, stage:III, dead, 677 days
243.4
DO46493
0 years, female, NA, stage:IV, alive, 839 days
241.6
DO46528
0 years, female, NA, stage:III, alive, 6139 days
238.6
DO46546
0 years, female, NA, stage:III, dead, 1889 days
237.1
DO46443
0 years, female, NA, stage:III, dead, 2464 days
221.3
DO46400
0 years, female, NA, stage:III, dead, 719 days
209.3
DO46326
0 years, female, NA, stage:III, dead, 701 days
209.1
DO46340
0 years, female, NA, stage:III, dead, 616 days
202.5
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
200.4
DO46571
0 years, female, NA, stage:III, dead, 243 days
198.4
DO46327
0 years, female, NA, stage:III, dead, 184 days
195.8
DO46606
0 years, female, NA, stage:III, alive, 804 days
192.8
DO46602
0 years, female, NA, stage:III, dead, 205 days
190.2
DO46388
0 years, female, NA, stage:III, dead, 413 days
185.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
174.5
DO46374
0 years, female, NA, stage:III, dead, 1409 days
173.4
DO46334
0 years, female, NA, stage:III, dead, 496 days
171.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
171.3
DO46597
0 years, female, NA, stage:III, dead, 393 days
169.7
DO46508
0 years, female, NA, stage:III, dead, 2101 days
167.5
DO46402
0 years, female, NA, stage:III, dead, 511 days
166.8
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
164.1
DO46384
0 years, female, NA, stage:III, dead, 614 days
160.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
156.2
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
154.4
DO46386
0 years, female, NA, stage:III, dead, 1162 days
144.4
DO46325
0 years, female, NA, stage:III, dead, 477 days
143.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
140.3
DO46566
0 years, female, NA, stage:III, dead, 673 days
139.1
DO46332
0 years, female, NA, stage:III, dead, 689 days
138.5
DO46392
0 years, female, NA, stage:III, dead, 628 days
134.2
DO46518
0 years, female, NA, stage:III, alive, 2960 days
132.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
129.3
DO46328
0 years, female, NA, stage:III, dead, 972 days
128.5
DO46404
0 years, female, NA, stage:III, dead, 690 days
128.1
DO46561
0 years, female, NA, stage:III, dead, 195 days
120.7
DO46432
0 years, female, NA, stage:III, alive, 2218 days
120.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
108.0
DO46586
0 years, female, NA, stage:III, dead, 1019 days
105.5
DO46588
0 years, female, NA, stage:III, dead, 438 days
87.9
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
1.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
1.3
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
1.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
1.2
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
1.1
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.8
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.8
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.8
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.8
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.8
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.8
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.8
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.7
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.7
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.7
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.7
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.6
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.6
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.6
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.6
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.6
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.6
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.6
15524912-685a-47ce-a824-567848_D2
Tumor
0.6
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.6
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.5
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.5
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.5
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.5
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.5
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.5
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.5
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.5
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.5
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.4
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.4
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.4
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.4
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.4
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.4
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.4
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.4
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.4
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.4
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.4
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.4
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.3
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.3
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.3
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.3
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.3
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.3
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.3
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.2
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.2
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.2
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.1
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.1
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.1
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.1
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.0
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.0
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.0
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.0
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.0
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.0
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.0
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.0
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.0
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.0
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.0
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.1
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.1
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.1
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.1
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.1
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.1
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.2
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.2
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.2
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.2
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.2
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.2
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.2
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.3
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.3
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.3
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.3
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.5
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.5
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.8
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.