We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ROMO1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
329.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
78 years, male, white, stage:Stage IIIA, dead, 2486 days
1805.9
TCGA-G3-AAV6-01A
53 years, female, white, stage:Stage IIIA, dead, 65 days
1094.5
TCGA-BC-A69H-01A
64 years, male, white, stage:Stage II, alive, 444 days
993.7
TCGA-DD-A3A7-01A
67 years, male, stage:Stage IIIB, dead, 419 days
959.4
TCGA-DD-AAE0-01A
45 years, female, asian, stage:Stage IIIA, alive, 555 days
918.4
TCGA-KR-A7K7-01A
61 years, female, white, stage:Stage II, alive, 951 days
917.1
TCGA-CC-5259-01A
60 years, female, asian, stage:Stage IIIC, alive, 250 days
850.8
TCGA-CC-A7II-01A
54 years, male, asian, stage:Stage IIIA, alive, 399 days
841.8
TCGA-DD-AADS-01A
63 years, male, asian, stage:Stage I, alive, 474 days
823.2
TCGA-G3-A25S-01A
64 years, male, white, stage:Stage I, dead, 416 days
796.1
TCGA-G3-A25X-01A
73 years, male, asian, stage:Stage II, alive, 1779 days
783.6
TCGA-DD-A73G-01A
73 years, female, white, stage:Stage I, alive, 3478 days
774.2
TCGA-ES-A2HS-01A
80 years, male, white, stage:Stage I, dead, 688 days
758.3
TCGA-DD-A4NN-01A
56 years, female, white, stage:Stage I, dead, 899 days
743.3
TCGA-DD-AACL-01A
66 years, female, asian, stage:Stage I, dead, 107 days
725.6
TCGA-CC-A7IG-01A
47 years, male, asian, stage:Stage II, dead, 299 days
714.0
TCGA-DD-AADO-01A
55 years, male, asian, stage:Stage I, alive, 453 days
700.1
TCGA-WQ-A9G7-01A
71 years, female, white, stage:'--, alive, 30 days
682.0
TCGA-CC-A5UE-01A
48 years, male, asian, stage:Stage IIIB, dead, 272 days
646.3
TCGA-G3-A25T-01A
45 years, female, white, stage:Stage IIIA, alive, 1553 days
644.3
TCGA-MI-A75G-01A
63 years, male, white, stage:Stage II, alive, 698 days
641.6
TCGA-DD-A39V-01A
77 years, male, white, stage:Stage II, dead, 643 days
637.7
TCGA-G3-A7M9-01A
70 years, male, white, stage:Stage IIIB, dead, 56 days
632.7
TCGA-DD-A3A9-01A
64 years, female, white, stage:Stage IVB, dead, 931 days
627.6
TCGA-DD-AACI-01A
69 years, male, asian, stage:Stage II, alive, 1618 days
618.0
TCGA-FV-A495-01A
51 years, female, white, stage:Stage II, alive, 1 days
617.1
TCGA-DD-AACO-01A
40 years, male, asian, stage:Stage I, alive, 1876 days
600.8
TCGA-DD-A3A6-01A
72 years, female, white, stage:Stage II, dead, 3258 days
588.2
TCGA-CC-A123-01A
24 years, female, asian, stage:Stage IIIA, alive, 219 days
585.1
TCGA-RC-A6M6-01A
75 years, male, white, stage:Stage II, alive, 9 days
579.0
TCGA-DD-AAVV-01A
56 years, male, asian, stage:Stage II, alive, 2455 days
557.3
TCGA-DD-AADI-01A
43 years, female, asian, stage:Stage I, alive, 1085 days
550.6
TCGA-UB-A7ME-01A
51 years, male, asian, stage:Stage I, alive, 486 days
541.3
TCGA-ED-A8O6-01A
50 years, female, asian, stage:Stage IIIA, dead, 56 days
536.2
TCGA-DD-AACG-01A
52 years, male, asian, stage:Stage II, dead, 469 days
535.0
TCGA-DD-AACP-01A
64 years, male, asian, stage:Stage I, alive, 415 days
533.3
TCGA-BD-A2L6-01A
69 years, male, white, stage:'--, alive, 1363 days
530.7
TCGA-CC-5261-01A
44 years, male, asian, stage:Stage II, dead, 97 days
527.8
TCGA-DD-AAVU-01A
46 years, male, asian, stage:Stage II, alive, 2202 days
526.0
TCGA-DD-A3A5-01A
66 years, female, white, stage:Stage III, dead, 3125 days
520.2
TCGA-DD-AAEA-01A
65 years, male, asian, stage:Stage I, alive, 575 days
503.3
TCGA-ED-A7PX-01A
48 years, female, asian, stage:Stage II, alive, 6 days
498.0
TCGA-CC-A3M9-01A
45 years, male, asian, stage:Stage IIIA, dead, 300 days
494.6
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:Stage I, alive, 12 days
491.9
TCGA-5C-AAPD-01A
61 years, male, asian, stage:Stage II, alive, 20 days
488.5
TCGA-UB-A7MA-01A
62 years, female, white, stage:Stage II, alive, 848 days
487.6
TCGA-G3-A7M5-01A
76 years, male, asian, stage:Stage I, alive, 447 days
484.5
TCGA-RC-A7SH-01A
42 years, male, asian, stage:Stage II, alive, 468 days
483.9
TCGA-CC-A9FW-01A
68 years, male, asian, stage:Stage IIIA, alive, 248 days
482.5
TCGA-CC-A5UD-01A
45 years, male, asian, stage:Stage IIIA, dead, 304 days
476.1
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:Stage II, alive, 1098 days
475.5
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:Stage II, alive, 6 days
473.3
TCGA-DD-AAE3-01A
50 years, male, asian, stage:Stage I, alive, 566 days
472.5
TCGA-G3-AAV7-01A
38 years, male, asian, stage:Stage II, alive, 361 days
471.9
TCGA-BC-A5W4-01A
69 years, male, white, stage:Stage IIIA, dead, 547 days
469.7
TCGA-ED-A7XO-01A
29 years, male, asian, stage:Stage IIIA, alive, 427 days
461.0
TCGA-DD-AAE9-01A
69 years, male, asian, stage:Stage I, alive, 722 days
453.7
TCGA-DD-AAC8-01A
72 years, male, asian, stage:Stage I, dead, 16 days
448.4
TCGA-XR-A8TD-01A
49 years, female, white, stage:Stage IIIB, alive, 1030 days
447.5
TCGA-DD-AA3A-01A
81 years, female, white, stage:Stage I, dead, 410 days
446.9
TCGA-ED-A7PY-01A
20 years, female, asian, stage:Stage II, alive, 390 days
444.2
TCGA-DD-AADN-01A
59 years, male, asian, stage:Stage I, alive, 898 days
441.2
TCGA-DD-A4NO-01A
65 years, male, white, stage:Stage I, alive, 2245 days
439.3
TCGA-MI-A75I-01A
61 years, male, black or african american, stage:'--, alive, 630 days
438.7
TCGA-DD-AADJ-01A
70 years, female, asian, stage:Stage I, alive, 1066 days
436.5
TCGA-2Y-A9GY-01A
64 years, female, white, stage:Stage II, dead, 757 days
433.1
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:Stage II, alive, 94 days
431.8
TCGA-KR-A7K2-01A
64 years, male, white, stage:Stage I, alive, 829 days
431.3
TCGA-DD-AAEE-01A
55 years, male, asian, stage:Stage I, alive, 810 days
427.1
TCGA-BC-A3KG-01A
68 years, female, white, stage:Stage II, alive, 680 days
426.1
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:Stage I, dead, 438 days
424.3
TCGA-DD-AACB-01A
74 years, female, asian, stage:Stage I, alive, 2324 days
424.0
TCGA-DD-A119-01A
40 years, male, asian, stage:Stage IV, dead, 223 days
423.9
TCGA-CC-A8HU-01A
39 years, female, asian, stage:Stage IIIA, dead, 344 days
422.1
TCGA-CC-A8HS-01A
18 years, male, asian, stage:Stage IIIC, dead, 300 days
421.0
TCGA-DD-A39Z-01A
43 years, female, stage:Stage II, dead, 601 days
420.1
TCGA-DD-AAEH-01A
73 years, male, asian, stage:Stage I, alive, 784 days
419.3
TCGA-DD-AACS-01A
39 years, male, asian, stage:Stage I, alive, 1804 days
418.6
TCGA-DD-A39Y-01A
67 years, male, asian, stage:Stage I, dead, 171 days
417.1
TCGA-2Y-A9H7-01A
81 years, female, white, stage:Stage I, alive, 1168 days
416.8
TCGA-DD-A116-01A
68 years, male, asian, stage:Stage IIIA, dead, 1622 days
416.5
TCGA-DD-AACF-01A
68 years, male, asian, stage:Stage I, dead, 365 days
416.4
TCGA-FV-A3R2-01A
75 years, male, white, stage:Stage I, dead, 194 days
414.3
TCGA-DD-AACV-01A
53 years, male, asian, stage:Stage I, alive, 1531 days
413.0
TCGA-G3-A7M6-01A
60 years, female, white, stage:Stage I, alive, 632 days
410.6
TCGA-DD-AAVS-01A
56 years, male, asian, stage:Stage I, alive, 1823 days
405.1
TCGA-DD-AADD-01A
51 years, male, asian, stage:Stage I, alive, 1231 days
404.7
TCGA-BC-A3KF-01A
66 years, female, white, stage:Stage I, alive, 8 days
403.7
TCGA-G3-A25Y-01A
52 years, female, asian, stage:Stage I, dead, 452 days
403.1
TCGA-MI-A75H-01A
77 years, male, white, stage:'--, alive, 747 days
401.6
TCGA-DD-AAD0-01A
73 years, female, asian, stage:Stage I, alive, 137 days
400.6
TCGA-DD-AACW-01A
43 years, male, asian, stage:Stage I, alive, 1424 days
400.6
TCGA-2Y-A9H8-01A
85 years, female, white, stage:'--, dead, 633 days
399.4
TCGA-CC-A5UC-01A
63 years, male, asian, stage:Stage IIIA, dead, 347 days
398.5
TCGA-DD-AACU-01A
59 years, male, asian, stage:Stage I, alive, 1567 days
398.0
TCGA-DD-AAD5-01A
54 years, male, asian, stage:Stage I, alive, 1345 days
396.5
TCGA-WQ-AB4B-01A
62 years, male, white, stage:Stage II, alive, 395 days
395.1
TCGA-FV-A3I0-01A
76 years, female, white, stage:Stage II, alive, 848 days
395.0
TCGA-CC-A7IF-01A
59 years, male, asian, stage:Stage IIIA, dead, 649 days
390.9
TCGA-2Y-A9H1-01A
58 years, male, white, stage:Stage I, dead, 1229 days
388.9
TCGA-G3-AAUZ-01A
48 years, male, stage:Stage I, alive, 480 days
388.2
TCGA-PD-A5DF-01A
58 years, female, white, stage:Stage IIIB, dead, 639 days
386.6
TCGA-CC-A8HT-01A
74 years, male, asian, stage:Stage IIIA, dead, 140 days
384.7
TCGA-UB-A7MB-01A
24 years, male, white, stage:Stage II, alive, 601 days
384.5
TCGA-DD-A4NR-01A
85 years, female, white, stage:Stage I, dead, 9 days
383.1
TCGA-DD-A39X-01A
78 years, female, white, stage:Stage I, dead, 1694 days
381.9
TCGA-CC-5260-01A
61 years, female, asian, stage:Stage IIIC, dead, 87 days
380.2
TCGA-BC-A10Q-01A
72 years, female, white, stage:'--, dead, 1135 days
377.6
TCGA-T1-A6J8-01A
68 years, male, white, stage:'--, alive, 23 days
376.2
TCGA-CC-A7IL-01A
61 years, male, asian, stage:Stage IIIA, dead, 278 days
374.1
TCGA-DD-AADM-01A
58 years, male, asian, stage:Stage II, dead, 12 days
372.7
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:Stage IIIA, alive, 20 days
371.0
TCGA-5C-A9VG-01A
58 years, male, white, stage:Stage II, alive, 328 days
370.4
TCGA-DD-A118-01A
77 years, female, white, stage:Stage II, alive, 3437 days
370.2
TCGA-G3-AAV0-01A
58 years, male, asian, stage:Stage I, alive, 476 days
358.7
TCGA-DD-A4ND-01A
56 years, female, white, stage:Stage I, alive, 2746 days
358.4
TCGA-CC-A7IE-01A
57 years, male, asian, stage:Stage IIIA, dead, 217 days
355.8
TCGA-DD-AACC-01A
61 years, male, asian, stage:Stage I, dead, 1685 days
354.5
TCGA-UB-A7MF-01A
56 years, male, white, stage:Stage IIIA, dead, 214 days
351.9
TCGA-DD-AADC-01A
53 years, male, asian, stage:Stage I, dead, 425 days
351.1
TCGA-GJ-A6C0-01A
75 years, female, white, stage:Stage II, dead, 31 days
351.0
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
350.9
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:Stage II, dead, 415 days
350.9
TCGA-DD-AADW-01A
48 years, male, asian, stage:Stage I, alive, 587 days
350.7
TCGA-RC-A7S9-01A
47 years, female, asian, stage:Stage I, alive, 640 days
348.9
TCGA-CC-A8HV-01A
51 years, female, asian, stage:Stage II, dead, 279 days
347.2
TCGA-DD-AAEG-01A
59 years, female, asian, stage:Stage I, alive, 719 days
346.4
TCGA-MI-A75C-01A
64 years, male, white, stage:Stage I, alive, 291 days
345.6
TCGA-2Y-A9H3-01A
45 years, male, white, stage:Stage II, alive, 1516 days
345.4
TCGA-WX-AA44-01A
64 years, female, white, stage:Stage I, alive, 615 days
344.1
TCGA-DD-AACH-01A
69 years, male, asian, stage:Stage II, dead, 195 days
343.2
TCGA-DD-AACZ-01A
63 years, female, asian, stage:Stage I, dead, 171 days
339.8
TCGA-ED-A66X-01A
35 years, male, asian, stage:Stage IIIA, alive, 406 days
338.0
TCGA-DD-AADU-01A
60 years, male, asian, stage:Stage II, alive, 554 days
337.7
TCGA-YA-A8S7-01A
68 years, male, white, stage:Stage IIIA, dead, 412 days
337.5
TCGA-2Y-A9HA-01A
70 years, male, white, stage:Stage II, dead, 36 days
337.4
TCGA-DD-A11C-01A
69 years, male, white, stage:Stage I, alive, 662 days
334.5
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:Stage I, alive, 1900 days
333.6
TCGA-BC-A10Y-01A
76 years, male, white, stage:'--, dead, 711 days
332.1
TCGA-DD-A1EF-01A
57 years, female, white, stage:Stage I, dead, 394 days
331.9
TCGA-O8-A75V-01A
54 years, male, stage:Stage I, alive, 538 days
331.5
TCGA-EP-A3JL-01A
76 years, male, white, stage:Stage I, alive, 303 days
325.0
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:Stage I, alive, 2728 days
323.1
TCGA-DD-A4NH-01A
65 years, female, white, stage:Stage IIIB, alive, 917 days
320.6
TCGA-DD-AAE1-01A
52 years, male, asian, stage:Stage I, alive, 552 days
319.9
TCGA-FV-A23B-01A
70 years, female, white, stage:Stage II, dead, 1852 days
319.3
TCGA-DD-A3A3-01A
45 years, male, asian, stage:Stage I, dead, 535 days
317.2
TCGA-DD-AADF-01A
64 years, female, asian, stage:Stage I, dead, 115 days
316.5
TCGA-ZS-A9CD-01A
73 years, male, white, stage:Stage II, dead, 1386 days
316.4
TCGA-DD-AACJ-01A
75 years, male, asian, stage:Stage II, alive, 2102 days
313.3
TCGA-DD-AACN-01A
32 years, male, asian, stage:Stage I, alive, 1302 days
311.1
TCGA-EP-A2KB-01A
46 years, female, white, stage:Stage I, dead, 596 days
310.9
TCGA-DD-AAVP-01A
48 years, male, asian, stage:Stage I, alive, 2752 days
310.7
TCGA-DD-AAE6-01A
59 years, female, asian, stage:Stage I, alive, 141 days
310.4
TCGA-K7-A6G5-01A
66 years, male, white, stage:Stage I, alive, 512 days
308.3
TCGA-DD-A1EJ-01A
71 years, female, white, stage:Stage IIIC, dead, 1005 days
308.3
TCGA-2Y-A9H6-01A
68 years, female, white, stage:Stage I, alive, 357 days
307.1
TCGA-EP-A2KA-01A
52 years, female, white, stage:Stage IIIA, dead, 627 days
306.8
TCGA-RC-A6M4-01A
74 years, female, white, stage:Stage IIIA, alive, 22 days
305.9
TCGA-DD-AADB-01A
51 years, male, asian, stage:Stage I, alive, 1242 days
304.7
TCGA-DD-A4NA-01A
67 years, female, white, stage:Stage IIIC, alive, 1008 days
302.1
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:Stage I, dead, 52 days
301.8
TCGA-DD-AAEB-01A
60 years, male, asian, stage:Stage I, alive, 478 days
301.1
TCGA-DD-A73E-01A
66 years, male, white, stage:Stage I, alive, 44 days
301.0
TCGA-ED-A459-01A
47 years, male, asian, stage:Stage II, alive, 910 days
300.4
TCGA-G3-A5SM-01A
58 years, male, white, stage:Stage II, alive, 520 days
299.7
TCGA-G3-AAV2-01A
50 years, male, white, stage:Stage I, alive, 372 days
299.6
TCGA-DD-AACQ-01A
50 years, male, asian, stage:Stage II, dead, 432 days
298.6
TCGA-HP-A5N0-01A
90 years, female, stage:'--, dead, 752 days
297.9
TCGA-ZS-A9CE-01A
79 years, female, white, stage:Stage II, alive, 1241 days
297.5
TCGA-DD-A3A1-01A
65 years, male, stage:Stage IIIA, dead, 233 days
297.3
TCGA-DD-A1EG-01A
76 years, male, white, stage:Stage I, dead, 1372 days
296.9
TCGA-DD-AADK-01A
68 years, female, asian, stage:Stage II, alive, 1049 days
296.5
TCGA-2Y-A9H9-01A
70 years, male, white, stage:Stage I, alive, 697 days
296.1
TCGA-CC-5262-01A
67 years, male, asian, stage:Stage IIIC, dead, 103 days
295.9
TCGA-BC-A69I-01A
69 years, male, white, stage:Stage I, alive, 387 days
295.7
TCGA-DD-AADP-01A
45 years, male, asian, stage:Stage I, alive, 458 days
295.3
TCGA-DD-A73B-01A
72 years, female, white, stage:Stage I, dead, 283 days
294.9
TCGA-CC-A1HT-01A
50 years, male, asian, stage:Stage IIIA, dead, 101 days
294.2
TCGA-DD-AACA-01A
65 years, male, asian, stage:Stage I, alive, 2301 days
293.0
TCGA-ZP-A9CZ-01A
72 years, male, asian, stage:'--, alive, 706 days
292.0
TCGA-DD-AAE4-01A
49 years, female, asian, stage:Stage I, alive, 608 days
289.0
TCGA-BC-A217-01A
75 years, female, white, stage:Stage II, dead, 1397 days
287.1
TCGA-ED-A82E-01A
60 years, female, asian, stage:Stage IIIA, alive, 408 days
286.4
TCGA-RC-A7SB-01A
53 years, male, asian, stage:Stage II, alive, 588 days
286.2
TCGA-ED-A8O5-01A
59 years, female, asian, stage:Stage IIIA, alive, 406 days
286.0
TCGA-CC-A3MC-01A
54 years, male, asian, stage:Stage IIIA, alive, 363 days
284.6
TCGA-DD-A11B-01A
73 years, male, white, stage:Stage I, dead, 14 days
281.2
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:Stage I, alive, 1452 days
281.1
TCGA-G3-A3CH-01A
53 years, male, asian, stage:Stage IIIA, alive, 780 days
278.2
TCGA-DD-A1EI-01A
46 years, male, asian, stage:Stage I, alive, 183 days
276.2
TCGA-DD-A3A8-01A
75 years, male, white, stage:Stage II, dead, 11 days
275.9
TCGA-CC-5264-01A
71 years, male, asian, stage:Stage IIIA, dead, 102 days
275.4
TCGA-DD-AADR-01A
58 years, male, asian, stage:Stage I, alive, 2028 days
275.1
TCGA-DD-AADG-01A
70 years, male, asian, stage:Stage IIIA, alive, 1145 days
275.0
TCGA-DD-AACD-01A
48 years, male, asian, stage:Stage I, dead, 381 days
274.7
TCGA-WX-AA47-01A
33 years, female, white, stage:Stage IIIA, dead, 556 days
273.0
TCGA-LG-A9QC-01A
48 years, male, white, stage:Stage I, alive, 425 days
271.4
TCGA-5C-A9VH-01A
70 years, male, white, stage:Stage I, alive, 322 days
271.4
TCGA-DD-AAVR-01A
44 years, male, asian, stage:Stage I, alive, 2513 days
271.2
TCGA-G3-A25Z-01A
58 years, male, asian, stage:Stage I, alive, 655 days
270.3
TCGA-ED-A66Y-01A
51 years, female, asian, stage:Stage IIIA, dead, 296 days
268.8
TCGA-DD-AADV-01A
50 years, male, asian, stage:Stage I, alive, 574 days
268.4
TCGA-DD-A1EH-01A
23 years, male, white, stage:Stage III, alive, 1495 days
268.3
TCGA-DD-AADY-01A
55 years, female, asian, stage:Stage I, alive, 555 days
268.0
TCGA-G3-AAV5-01A
67 years, male, white, stage:Stage II, alive, 354 days
267.9
TCGA-LG-A6GG-01A
79 years, female, white, stage:Stage II, alive, 387 days
266.4
TCGA-ZS-A9CG-01A
55 years, male, white, stage:Stage II, alive, 341 days
264.2
TCGA-G3-A7M7-01A
65 years, male, white, stage:Stage I, alive, 361 days
264.0
TCGA-DD-A115-01A
53 years, male, white, stage:Stage IIIA, dead, 2542 days
263.0
TCGA-FV-A2QQ-01A
80 years, male, white, stage:Stage I, alive, 729 days
262.7
TCGA-DD-AAED-01A
51 years, male, asian, stage:Stage I, alive, 763 days
260.6
TCGA-RC-A7SF-01A
66 years, male, asian, stage:Stage I, alive, 579 days
260.2
TCGA-G3-AAV4-01A
83 years, female, white, stage:Stage I, dead, 27 days
260.2
TCGA-DD-AAW3-01A
69 years, male, asian, stage:Stage I, alive, 1633 days
259.7
TCGA-MI-A75E-01A
61 years, male, white, stage:Stage IIIC, alive, 507 days
259.7
TCGA-KR-A7K0-01A
65 years, male, white, stage:Stage I, dead, 65 days
259.6
TCGA-2Y-A9H0-01A
49 years, male, white, stage:Stage IIIA, alive, 3675 days
259.3
TCGA-DD-A73F-01A
77 years, female, white, stage:Stage I, alive, 1085 days
258.6
TCGA-DD-A4NQ-01A
60 years, male, white, stage:Stage II, dead, 373 days
256.9
TCGA-CC-A9FS-01A
55 years, male, asian, stage:Stage II, alive, 211 days
256.3
TCGA-DD-A114-01A
42 years, male, black or african american, stage:Stage II, dead, 1149 days
256.2
TCGA-G3-A5SI-01A
44 years, male, asian, stage:Stage II, dead, 768 days
255.5
TCGA-CC-A3MA-01A
61 years, male, asian, stage:Stage IIIA, dead, 303 days
255.4
TCGA-EP-A3RK-01A
73 years, male, white, stage:Stage IIIA, alive, 363 days
253.5
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:Stage I, dead, 19 days
252.3
TCGA-DD-AADQ-01A
59 years, male, asian, stage:Stage II, alive, 436 days
251.2
TCGA-DD-A113-01A
55 years, female, white, stage:Stage II, alive, 2425 days
251.0
TCGA-DD-AAD6-01A
66 years, male, asian, stage:Stage IIIA, alive, 672 days
250.5
TCGA-DD-AAW2-01A
69 years, male, asian, stage:Stage I, alive, 1855 days
250.4
TCGA-BD-A3EP-01A
75 years, female, black or african american, stage:Stage I, alive, 409 days
249.2
TCGA-GJ-A3OU-01A
59 years, male, white, stage:Stage I, alive, 879 days
247.1
TCGA-ZP-A9D2-01A
51 years, male, white, stage:'--, dead, 765 days
243.1
TCGA-BC-A10W-01A
50 years, male, asian, stage:'--, dead, 91 days
241.7
TCGA-CC-A3MB-01A
36 years, male, asian, stage:Stage IIIA, dead, 315 days
241.6
TCGA-DD-AAD8-01A
73 years, female, asian, stage:Stage I, alive, 1219 days
239.6
TCGA-XR-A8TF-01A
74 years, male, white, stage:Stage I, dead, 693 days
237.3
TCGA-ED-A5KG-01A
60 years, female, asian, stage:Stage II, alive, 854 days
237.0
TCGA-DD-AAD3-01A
43 years, male, asian, stage:Stage I, alive, 1295 days
233.7
TCGA-NI-A8LF-01A
74 years, male, white, stage:Stage I, alive, 799 days
232.9
TCGA-G3-A25U-01A
63 years, female, asian, stage:Stage I, alive, 1636 days
232.7
TCGA-DD-AADA-01A
66 years, female, asian, stage:Stage I, alive, 1233 days
232.7
TCGA-EP-A26S-01A
70 years, male, white, stage:Stage I, alive, 608 days
232.5
TCGA-2Y-A9GS-01A
58 years, male, white, stage:'--, dead, 724 days
232.4
TCGA-DD-AAVY-01A
56 years, male, asian, stage:Stage IIIA, alive, 1970 days
231.9
TCGA-DD-A73D-01A
68 years, female, white, stage:Stage II, alive, 693 days
229.2
TCGA-DD-A4NS-01A
61 years, female, white, stage:Stage I, dead, 2456 days
228.9
TCGA-RC-A7SK-01A
59 years, male, asian, stage:Stage I, alive, 472 days
228.7
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:Stage IIIB, alive, 396 days
228.6
TCGA-K7-A5RF-01A
64 years, male, white, stage:Stage I, alive, 631 days
227.5
TCGA-G3-AAV3-01A
58 years, female, white, stage:Stage II, alive, 412 days
227.1
TCGA-FV-A496-01A
84 years, female, white, stage:Stage I, alive, 10 days
226.2
TCGA-DD-AAEK-01A
51 years, male, asian, stage:Stage II, alive, 1067 days
224.9
TCGA-DD-AADL-01A
58 years, male, asian, stage:Stage I, alive, 636 days
223.7
TCGA-G3-A25V-01A
68 years, male, white, stage:Stage I, alive, 860 days
222.0
TCGA-KR-A7K8-01A
57 years, male, stage:Stage I, alive, 906 days
221.9
TCGA-XR-A8TC-01A
43 years, female, white, stage:Stage I, alive, 1339 days
221.0
TCGA-DD-AAD1-01A
51 years, female, asian, stage:Stage I, alive, 564 days
220.9
TCGA-DD-AACK-01A
70 years, male, asian, stage:Stage I, alive, 9 days
216.5
TCGA-5R-AAAM-01A
65 years, female, white, stage:Stage II, dead, 46 days
215.8
TCGA-FV-A2QR-01A
75 years, male, white, stage:Stage I, dead, 581 days
215.7
TCGA-BC-A8YO-01A
66 years, female, white, stage:Stage IIIC, alive, 562 days
215.5
TCGA-CC-5263-01A
35 years, male, asian, stage:Stage IIIA, dead, 129 days
214.5
TCGA-NI-A4U2-01A
71 years, male, white, stage:Stage IIIA, dead, 1791 days
214.5
TCGA-G3-A5SJ-01A
59 years, male, white, stage:Stage I, alive, 698 days
212.1
TCGA-DD-A4NV-01A
61 years, male, white, stage:Stage IIIA, alive, 2398 days
211.8
TCGA-CC-A7IH-01A
58 years, male, asian, stage:Stage IIIA, alive, 365 days
211.6
TCGA-DD-AACY-01A
61 years, male, asian, stage:Stage I, alive, 1450 days
211.2
TCGA-DD-AACX-01A
66 years, male, asian, stage:Stage II, alive, 170 days
210.0
TCGA-BC-A110-01A
51 years, female, black or african american, stage:'--, dead, 2116 days
209.2
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:Stage II, alive, 382 days
209.2
TCGA-BC-A10S-01A
81 years, male, white, stage:'--, dead, 1423 days
209.2
TCGA-ZP-A9D4-01A
64 years, female, white, stage:'--, alive, 395 days
208.6
TCGA-5R-AA1C-01A
57 years, male, white, stage:Stage II, alive, 520 days
207.6
TCGA-RC-A6M5-01A
20 years, female, white, stage:Stage IVA, alive, 15 days
206.8
TCGA-UB-A7MC-01A
59 years, male, white, stage:Stage IIIA, alive, 500 days
206.6
TCGA-DD-AAW1-01A
55 years, male, asian, stage:Stage IIIA, alive, 1989 days
206.4
TCGA-DD-A4NJ-01A
54 years, female, white, stage:Stage II, alive, 928 days
206.3
TCGA-4R-AA8I-01A
66 years, male, white, stage:Stage II, dead, 262 days
204.1
TCGA-EP-A12J-01A
62 years, male, black or african american, stage:Stage I, alive, 570 days
202.9
TCGA-G3-A6UC-01A
65 years, male, white, stage:Stage IIIB, alive, 671 days
202.7
TCGA-WJ-A86L-01A
68 years, female, white, stage:Stage I, alive, 345 days
201.8
TCGA-DD-A4NB-01A
25 years, male, white, stage:Stage I, alive, 989 days
200.9
TCGA-DD-AAE2-01A
51 years, male, asian, stage:Stage I, alive, 638 days
200.3
TCGA-2Y-A9HB-01A
66 years, male, stage:Stage I, alive, 260 days
200.2
TCGA-K7-AAU7-01A
61 years, male, white, stage:Stage II, alive, 359 days
199.0
TCGA-DD-AAEI-01A
72 years, male, asian, stage:Stage I, alive, 1531 days
197.9
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:Stage I, alive, 519 days
197.7
TCGA-DD-AAC9-01A
51 years, male, asian, stage:Stage I, alive, 347 days
196.8
TCGA-DD-A4NP-01A
32 years, male, white, stage:Stage I, alive, 3308 days
196.8
TCGA-BC-A10Z-01A
62 years, female, white, stage:Stage I, dead, 34 days
196.6
TCGA-FV-A3I1-01A
81 years, female, white, stage:Stage II, dead, 247 days
196.0
TCGA-DD-AAVW-01A
35 years, male, asian, stage:Stage I, alive, 2317 days
195.9
TCGA-ZP-A9D1-01A
56 years, female, white, stage:'--, alive, 21 days
195.9
TCGA-CC-5258-01A
48 years, male, asian, stage:Stage II, dead, 129 days
194.9
TCGA-DD-AAD2-01A
66 years, male, asian, stage:Stage I, alive, 658 days
193.4
TCGA-2Y-A9H2-01A
64 years, female, white, stage:Stage I, alive, 1731 days
192.8
TCGA-G3-AAV1-01A
51 years, male, asian, stage:Stage IIIC, dead, 359 days
191.9
TCGA-BC-A216-01A
62 years, female, white, stage:Stage IIIA, alive, 1351 days
190.5
TCGA-DD-A39W-01A
29 years, female, white, stage:Stage III, dead, 827 days
190.5
TCGA-G3-A3CK-01A
61 years, male, asian, stage:Stage I, alive, 585 days
190.4
TCGA-ED-A7XP-01A
53 years, female, asian, stage:Stage II, alive, 400 days
189.9
TCGA-DD-A4NK-01A
80 years, female, white, stage:Stage IIIA, dead, 1210 days
188.4
TCGA-DD-AACT-01A
69 years, female, asian, stage:Stage I, alive, 1562 days
186.4
TCGA-WX-AA46-01A
61 years, male, white, stage:Stage II, alive, 756 days
186.3
TCGA-UB-AA0U-01A
60 years, male, white, stage:Stage II, alive, 327 days
184.9
TCGA-DD-AAW0-01A
54 years, male, asian, stage:Stage I, alive, 2015 days
184.7
TCGA-2Y-A9H5-01A
59 years, female, white, stage:Stage I, dead, 555 days
183.5
TCGA-ED-A627-01A
74 years, male, white, stage:Stage I, alive, 423 days
183.3
TCGA-DD-AAVX-01A
38 years, male, asian, stage:Stage II, alive, 1718 days
181.1
TCGA-GJ-A9DB-01A
68 years, male, white, stage:Stage I, dead, 67 days
180.8
TCGA-MR-A520-01A
58 years, male, white, stage:Stage I, alive, 229 days
179.5
TCGA-ZP-A9CY-01A
66 years, female, white, stage:'--, alive, 782 days
179.4
TCGA-ZS-A9CF-01A
64 years, male, white, stage:Stage II, alive, 2412 days
178.5
TCGA-DD-A11D-01A
57 years, female, white, stage:Stage I, dead, 1560 days
177.5
TCGA-G3-A3CG-01A
80 years, male, white, stage:Stage I, alive, 673 days
177.5
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:Stage II, dead, 848 days
176.5
TCGA-DD-A3A2-01A
76 years, female, white, stage:Stage I, dead, 2131 days
175.0
TCGA-BC-A10U-01A
69 years, male, white, stage:'--, dead, 837 days
173.4
TCGA-ED-A97K-01A
54 years, male, asian, stage:Stage IIIA, alive, 6 days
173.3
TCGA-XR-A8TG-01A
58 years, male, white, stage:Stage I, alive, 898 days
172.7
TCGA-HP-A5MZ-01A
78 years, male, stage:Stage I, dead, 91 days
170.1
TCGA-G3-A7M8-01A
31 years, male, asian, stage:Stage I, alive, 430 days
170.1
TCGA-DD-A73C-01A
65 years, female, white, stage:Stage IIIA, alive, 701 days
169.6
TCGA-DD-A1EA-01A
68 years, male, asian, stage:Stage II, alive, 2415 days
169.6
TCGA-CC-A7IK-01A
59 years, male, asian, stage:Stage IIIA, dead, 262 days
167.8
TCGA-DD-A1EC-01A
20 years, female, white, stage:Stage I, alive, 602 days
167.0
TCGA-ED-A4XI-01A
58 years, male, asian, stage:Stage II, alive, 819 days
166.1
TCGA-ZP-A9D0-01A
67 years, female, black or african american, stage:'--, alive, 1091 days
164.2
TCGA-DD-A73A-01A
71 years, male, white, stage:Stage I, alive, 728 days
162.8
TCGA-ZP-A9CV-01A
59 years, male, white, stage:'--, dead, 1088 days
152.9
TCGA-DD-AAE7-01A
72 years, male, asian, stage:Stage I, alive, 644 days
151.3
TCGA-DD-A1EB-01A
72 years, female, stage:Stage I, alive, 2017 days
150.9
TCGA-DD-A1EE-01A
73 years, male, white, stage:Stage IIIA, dead, 349 days
148.7
TCGA-5R-AA1D-01A
17 years, female, white, stage:Stage IIIA, alive, 449 days
148.5
TCGA-DD-A1EK-01A
64 years, female, white, stage:Stage IVB, dead, 558 days
148.2
TCGA-G3-A5SL-01A
70 years, male, white, stage:Stage II, alive, 621 days
148.1
TCGA-2Y-A9GW-01A
64 years, male, white, stage:Stage I, dead, 1271 days
146.3
TCGA-DD-A3A4-01A
37 years, male, white, stage:Stage IIIA, dead, 612 days
145.6
TCGA-BC-A112-01A
80 years, male, white, stage:'--, dead, 153 days
145.5
TCGA-LG-A9QD-01A
68 years, male, white, stage:Stage IIIA, alive, 366 days
144.0
TCGA-MR-A8JO-01A
34 years, male, white, stage:Stage I, alive, 330 days
142.4
TCGA-BC-A10T-01A
76 years, male, white, stage:'--, dead, 837 days
141.8
TCGA-FV-A3R3-01A
38 years, female, white, stage:Stage I, dead, 366 days
138.7
TCGA-DD-A4NG-01A
77 years, male, white, stage:Stage IIIA, dead, 802 days
137.5
TCGA-G3-A5SK-01A
58 years, male, white, stage:Stage I, alive, 744 days
135.2
TCGA-DD-A4NI-01A
67 years, male, white, stage:Stage II, alive, 816 days
134.3
TCGA-G3-A3CI-01A
71 years, male, white, stage:Stage I, alive, 180 days
132.6
TCGA-DD-A4NF-01A
72 years, male, white, stage:Stage I, alive, 942 days
130.2
TCGA-BD-A3ER-01A
62 years, male, white, stage:Stage II, alive, 1115 days
128.8
TCGA-2Y-A9GU-01A
55 years, female, white, stage:Stage I, alive, 1939 days
127.4
TCGA-BC-A10X-01A
52 years, female, white, stage:Stage IIIA, dead, 770 days
125.0
TCGA-UB-AA0V-01A
69 years, female, white, stage:Stage I, alive, 314 days
124.7
TCGA-DD-A4NL-01A
46 years, male, white, stage:Stage I, alive, 1711 days
122.2
TCGA-DD-AACE-01A
62 years, male, asian, stage:Stage I, alive, 2184 days
121.0
TCGA-2Y-A9GV-01A
54 years, female, white, stage:Stage I, dead, 2532 days
117.1
TCGA-BC-A10R-01A
66 years, female, white, stage:'--, dead, 308 days
116.1
TCGA-XR-A8TE-01A
16 years, male, white, stage:Stage IIIA, alive, 925 days
115.8
TCGA-2Y-A9GT-01A
51 years, male, white, stage:Stage I, dead, 1624 days
111.5
TCGA-2Y-A9GX-01A
68 years, male, white, stage:Stage I, alive, 2442 days
103.2
TCGA-DD-A1ED-01A
68 years, male, white, stage:Stage I, alive, 2301 days
98.0
TCGA-DD-A4NE-01A
75 years, female, white, stage:Stage IIIA, dead, 660 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ROMO1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
98.4
Number of samples
231
Samples
Sample
Description
TPM
DO23519
65 years, male, NA, stage:3, alive, 630 days
338.7
DO50839
47 years, female, NA, stage:3, alive, 330 days
323.9
DO23508
79 years, female, NA, stage:2, alive, 390 days
322.1
DO48741
64 years, male, NA, stage:3, alive, 240 days
305.0
DO50814
83 years, male, NA, stage:3, alive, 420 days
281.4
DO45285
59 years, male, NA, stage:3, alive, 480 days
242.7
DO50806
70 years, male, NA, stage:4, alive, 540 days
240.1
DO48759
73 years, male, NA, stage:3, alive, 720 days
235.2
DO23552
80 years, female, NA, stage:1, alive, 810 days
230.3
DO50785
37 years, male, NA, stage:4, dead, 90 days
221.5
DO23515
71 years, male, NA, stage:2, alive, 1230 days
210.3
DO45217
69 years, female, NA, stage:3, dead, 270 days
207.6
DO48747
62 years, male, NA, stage:3, alive, 540 days
202.6
DO45145
78 years, male, NA, stage:3, dead, 60 days
202.1
DO48737
52 years, male, NA, stage:1, alive, 720 days
200.5
DO23545
67 years, male, NA, stage:2, dead, 570 days
188.6
DO45289
78 years, female, NA, stage:3, alive, 360 days
182.0
DO45211
76 years, male, NA, stage:3, alive, 240 days
181.5
DO45127
73 years, male, NA, stage:3, dead, 420 days
178.8
DO45241
49 years, male, NA, stage:1, alive, 1080 days
178.1
DO50840
49 years, male, NA, stage:2, alive, 330 days
174.0
DO23525
71 years, male, NA, stage:4, alive, 1050 days
171.2
DO48697
64 years, female, NA, stage:2, dead, 810 days
169.7
DO23539
77 years, male, NA, stage:1, alive, 1110 days
169.2
DO50799
66 years, female, NA, stage:2, alive, 540 days
165.8
DO45269
59 years, male, NA, stage:3, alive, 750 days
160.6
DO45299
70 years, female, NA, stage:1, alive, 1440 days
159.6
DO48723
73 years, male, NA, stage:1, alive, 600 days
156.3
DO45092
62 years, male, NA, stage:4, dead, 1200 days
154.4
DO50783
62 years, male, NA, stage:3, alive, 480 days
153.0
DO50791
79 years, female, NA, stage:1, dead, 480 days
147.6
DO45305
66 years, male, NA, stage:4, alive, 300 days
144.8
DO45093
71 years, male, NA, stage:2, dead, 720 days
144.7
DO23526
66 years, male, NA, stage:3, alive, 1050 days
143.9
DO23511
83 years, female, NA, stage:3, dead, 180 days
141.2
DO45119
74 years, male, NA, stage:3, dead, 510 days
137.9
DO45185
89 years, male, NA, stage:2, alive, 600 days
137.8
DO48712
50 years, male, NA, stage:2, alive, 810 days
137.7
DO23537
79 years, male, NA, stage:2, dead, 900 days
135.5
DO45103
47 years, male, NA, stage:3, alive, 450 days
135.3
DO45097
69 years, male, NA, stage:3, alive, 1620 days
135.2
DO48679
72 years, male, NA, stage:2, alive, 1200 days
134.8
DO45161
74 years, male, NA, stage:2, dead, 540 days
133.7
DO50811
62 years, male, NA, stage:1, alive, 450 days
131.4
DO45307
54 years, female, NA, stage:4, dead, 240 days
128.1
DO45209
70 years, male, NA, stage:4, alive, 1350 days
124.9
DO50832
73 years, male, NA, stage:3, alive, 90 days
123.8
DO48715
58 years, female, NA, stage:2, dead, 690 days
122.8
DO45275
65 years, male, NA, stage:3, dead, 10 days
122.6
DO45183
72 years, female, NA, stage:2, dead, 570 days
122.5
DO50813
56 years, male, NA, stage:2, alive, 420 days
122.3
DO45125
58 years, male, NA, stage:3, alive, 1680 days
120.5
DO45273
62 years, male, NA, stage:2, alive, 480 days
120.0
DO45301
56 years, male, NA, stage:2, dead, 1440 days
117.1
DO45297
61 years, female, NA, stage:4, dead, 1260 days
115.1
DO48717
54 years, male, NA, stage:4, dead, 180 days
114.9
DO45173
63 years, male, NA, stage:3, alive, 1170 days
114.9
DO50808
68 years, male, NA, stage:2, alive, 570 days
114.5
DO23518
67 years, male, NA, stage:2, alive, 1320 days
114.1
DO23534
60 years, male, NA, stage:2, alive, 840 days
113.9
DO50809
56 years, male, NA, stage:3, dead, 720 days
112.2
DO50816
63 years, male, NA, stage:2, alive, 390 days
111.2
DO45131
53 years, male, NA, stage:4, dead, 360 days
110.9
DO45149
70 years, female, NA, stage:2, alive, 1260 days
110.8
DO45135
77 years, male, NA, stage:1, alive, 1410 days
108.8
DO45303
62 years, female, NA, stage:3, alive, 990 days
108.7
DO50789
73 years, female, NA, stage:2, alive, 570 days
108.7
DO45109
63 years, male, NA, stage:2, alive, 1590 days
107.8
DO45096
69 years, male, NA, stage:2, dead, 1290 days
107.3
DO50776
75 years, male, NA, stage:1, alive, 690 days
106.8
DO50825
70 years, male, NA, stage:2, alive, 390 days
106.3
DO50805
72 years, male, NA, stage:2, alive, 690 days
105.9
DO45245
75 years, female, NA, stage:2, dead, 240 days
105.0
DO23540
73 years, male, NA, stage:1, alive, 750 days
104.4
DO50855
47 years, male, NA, stage:2, alive, 570 days
104.3
DO45187
32 years, female, NA, stage:1, alive, 1260 days
102.8
DO45107
63 years, female, NA, stage:2, alive, 1710 days
102.0
DO23532
71 years, female, NA, stage:1, alive, 960 days
101.9
DO45287
74 years, male, NA, stage:1, alive, 390 days
101.7
DO48721
58 years, female, NA, stage:1, alive, 900 days
101.4
DO48736
76 years, female, NA, stage:1, alive, 600 days
101.4
DO50844
75 years, male, NA, stage:4, alive, 300 days
100.3
DO45115
81 years, male, NA, stage:2, alive, 840 days
99.4
DO50857
72 years, male, NA, stage:2, alive, 210 days
99.0
DO50845
72 years, male, NA, stage:3, alive, 210 days
98.9
DO45265
73 years, male, NA, stage:3, alive, 1020 days
98.6
DO45249
57 years, male, NA, stage:1, alive, 630 days
98.5
DO45105
61 years, male, NA, stage:1, alive, 1680 days
98.4
DO23523
52 years, male, NA, stage:3, alive, 1080 days
97.1
DO50802
49 years, male, NA, stage:2, alive, 930 days
96.4
DO45253
50 years, male, NA, stage:2, alive, 870 days
95.8
DO45099
46 years, male, NA, stage:3, alive, 1590 days
95.3
DO45207
68 years, male, NA, stage:1, alive, 1050 days
95.2
DO48674
80 years, male, NA, stage:2, alive, 1260 days
94.9
DO45095
66 years, male, NA, stage:2, alive, 1620 days
93.8
DO23528
45 years, female, NA, stage:2, alive, 1020 days
93.4
DO45261
74 years, male, NA, stage:3, alive, 990 days
93.4
DO50817
75 years, male, NA, stage:2, alive, 390 days
92.8
DO45199
86 years, female, NA, stage:2, alive, 1350 days
92.8
DO50787
63 years, male, NA, stage:3, alive, 480 days
92.3
DO45219
78 years, male, NA, stage:2, alive, 1080 days
92.2
DO45117
73 years, female, NA, stage:2, dead, 1110 days
92.1
DO45259
65 years, male, NA, stage:3, alive, 330 days
91.6
DO45143
69 years, male, NA, stage:3, alive, 1290 days
91.0
DO45193
68 years, female, NA, stage:4, dead, 120 days
90.1
DO45281
83 years, male, NA, stage:4, alive, 750 days
90.0
DO45221
75 years, female, NA, stage:4, dead, 390 days
89.5
DO48681
57 years, male, NA, stage:2, alive, 900 days
88.8
DO50819
72 years, female, NA, stage:2, alive, 510 days
87.9
DO45167
67 years, male, NA, stage:2, dead, 1440 days
87.4
DO23533
61 years, male, NA, stage:2, alive, 900 days
87.0
DO45121
61 years, male, NA, stage:3, alive, 1530 days
85.5
DO50798
77 years, male, NA, stage:3, dead, 30 days
85.4
DO45255
81 years, male, NA, stage:3, alive, 720 days
85.2
DO48730
73 years, female, NA, stage:2, alive, 630 days
84.6
DO48672
81 years, male, NA, stage:2, alive, 450 days
83.3
DO23516
69 years, male, NA, stage:3, dead, 20 days
83.1
DO45257
46 years, male, NA, stage:3, alive, 810 days
81.9
DO23521
63 years, male, NA, stage:3, alive, 1110 days
80.9
DO23524
71 years, female, NA, stage:2, alive, 1050 days
79.7
DO23509
60 years, male, NA, stage:3, dead, 780 days
79.3
DO45235
68 years, female, NA, stage:1, alive, 900 days
78.8
DO23512
60 years, male, NA, stage:1, alive, 1260 days
78.5
DO45153
77 years, female, NA, stage:2, alive, 1380 days
78.2
DO45267
73 years, male, NA, stage:3, dead, 570 days
78.1
DO45179
78 years, female, NA, stage:2, alive, 600 days
77.7
DO45197
51 years, male, NA, stage:2, alive, 1170 days
77.7
DO45229
74 years, male, NA, stage:1, alive, 990 days
76.7
DO48757
68 years, female, NA, stage:3, alive, 480 days
76.7
DO23548
78 years, female, NA, stage:1, alive, 840 days
76.6
DO45191
61 years, female, NA, stage:2, alive, 1200 days
76.3
DO45165
75 years, male, NA, stage:2, alive, 690 days
75.3
DO45251
57 years, female, NA, stage:2, alive, 900 days
75.2
DO45263
67 years, male, NA, stage:3, dead, 270 days
75.1
DO45277
64 years, male, NA, stage:3, alive, 600 days
74.9
DO227643
79 years, male, NA, stage:2, alive, 1260 days
74.9
DO45091
56 years, male, NA, stage:2, dead, 1320 days
74.7
DO48751
68 years, male, NA, stage:2, dead, 480 days
74.7
DO50778
60 years, male, NA, stage:4, alive, 630 days
74.5
DO50829
78 years, male, NA, stage:3, alive, 570 days
74.4
DO45113
58 years, male, NA, stage:3, alive, 1560 days
74.3
DO45213
58 years, male, NA, stage:1, alive, 1200 days
73.9
DO50859
77 years, male, NA, stage:2, alive, 180 days
73.3
DO45141
73 years, male, NA, stage:2, alive, 1320 days
73.0
DO23510
80 years, female, NA, stage:2, alive, 870 days
73.0
DO45231
84 years, male, NA, stage:2, alive, 930 days
73.0
DO50815
62 years, male, NA, stage:3, alive, 150 days
71.9
DO23549
74 years, male, NA, stage:3, alive, 990 days
71.6
DO45139
63 years, male, NA, stage:3, alive, 1320 days
71.6
DO45189
85 years, female, NA, stage:2, alive, 1200 days
70.9
DO48725
66 years, male, NA, stage:1, alive, 780 days
70.6
DO48700
78 years, female, NA, stage:2, alive, 810 days
70.0
DO50774
68 years, female, NA, stage:2, alive, 720 days
70.0
DO23547
74 years, male, NA, stage:1, alive, 1020 days
69.8
DO45225
69 years, male, NA, stage:1, alive, 1050 days
69.2
DO48746
76 years, male, NA, stage:3, alive, 570 days
69.0
DO48716
71 years, male, NA, stage:2, alive, 720 days
68.8
DO48720
62 years, female, NA, stage:2, alive, 570 days
68.6
DO45243
74 years, female, NA, stage:3, alive, 930 days
68.5
DO48701
78 years, male, NA, stage:2, alive, 780 days
68.4
DO48761
55 years, male, NA, stage:2, alive, 870 days
68.1
DO45137
38 years, male, NA, stage:1, alive, 1320 days
68.1
DO45283
60 years, male, NA, stage:3, alive, 510 days
68.0
DO50820
77 years, female, NA, stage:3, alive, 510 days
67.9
DO50822
66 years, male, NA, stage:2, alive, 510 days
67.6
DO50818
65 years, male, NA, stage:2, alive, 510 days
67.1
DO45237
58 years, male, NA, stage:2, alive, 900 days
66.3
DO50800
74 years, male, NA, stage:2, alive, 510 days
66.2
DO48743
69 years, female, NA, stage:2, alive, 570 days
65.5
DO45169
74 years, male, NA, stage:3, alive, 1350 days
64.2
DO45205
67 years, female, NA, stage:2, dead, 90 days
63.7
DO23543
63 years, male, NA, stage:2, alive, 1020 days
63.5
DO45159
65 years, male, NA, stage:3, alive, 1470 days
63.0
DO45203
71 years, female, NA, stage:2, alive, 1170 days
62.9
DO45101
63 years, male, NA, stage:2, alive, 1680 days
61.9
DO45129
61 years, male, NA, stage:3, alive, 1470 days
61.5
DO23535
67 years, male, NA, stage:1, alive, 960 days
61.4
DO48704
68 years, female, NA, stage:3, alive, 750 days
60.9
DO45175
74 years, male, NA, stage:2, alive, 1140 days
60.6
DO48693
71 years, male, NA, stage:2, alive, 900 days
60.5
DO48719
80 years, male, NA, stage:2, alive, 690 days
60.3
DO23546
63 years, male, NA, stage:2, alive, 1050 days
59.9
DO45111
74 years, male, NA, stage:2, alive, 1590 days
59.4
DO48706
72 years, male, NA, stage:2, alive, 870 days
59.2
DO23513
76 years, male, NA, stage:3, alive, 1200 days
59.0
DO45123
78 years, female, NA, stage:2, dead, 570 days
58.4
DO45177
81 years, female, NA, stage:3, alive, 1260 days
58.0
DO45233
83 years, male, NA, stage:3, alive, 900 days
57.3
DO50804
81 years, male, NA, stage:2, alive, 720 days
57.3
DO23529
72 years, male, NA, stage:4, alive, 930 days
55.5
DO23517
62 years, male, NA, stage:2, alive, 1200 days
55.4
DO227801
77 years, female, NA, stage:1, alive, 660 days
55.4
DO23530
53 years, male, NA, stage:4, dead, 180 days
54.5
DO45171
56 years, male, NA, stage:3, alive, 600 days
54.2
DO45239
42 years, male, NA, stage:2, alive, 870 days
53.7
DO48695
77 years, male, NA, stage:2, alive, 720 days
53.7
DO50850
74 years, male, NA, stage:3, alive, 720 days
53.5
DO45155
69 years, male, NA, stage:2, alive, 2160 days
53.1
DO45223
67 years, male, NA, stage:4, alive, 1020 days
53.0
DO45163
76 years, male, NA, stage:2, alive, 960 days
52.7
DO45227
57 years, female, NA, stage:2, alive, 1020 days
52.5
DO48760
70 years, female, NA, stage:2, alive, 690 days
52.3
DO23514
64 years, male, NA, stage:2, alive, 1290 days
52.1
DO45247
31 years, female, NA, stage:2, alive, 210 days
51.5
DO48728
74 years, female, NA, stage:2, alive, 150 days
51.2
DO45201
49 years, male, NA, stage:1, alive, 900 days
51.1
DO45215
65 years, male, NA, stage:2, alive, 1170 days
51.0
DO48732
73 years, male, NA, stage:3, alive, 630 days
50.7
DO48682
72 years, female, NA, stage:3, dead, 120 days
50.6
DO48742
76 years, male, NA, stage:2, alive, 600 days
50.2
DO48677
58 years, male, NA, stage:3, alive, 1140 days
50.1
DO45133
64 years, male, NA, stage:3, dead, 660 days
49.7
DO23550
69 years, male, NA, stage:1, alive, 990 days
49.5
DO45195
62 years, male, NA, stage:1, alive, 390 days
48.1
DO45181
84 years, female, NA, stage:2, alive, 1200 days
47.6
DO23536
56 years, male, NA, stage:2, alive, 930 days
47.3
DO23544
67 years, male, NA, stage:2, alive, 960 days
47.3
DO23527
72 years, male, NA, stage:1, alive, 1050 days
46.9
DO45157
62 years, male, NA, stage:2, alive, 1980 days
46.7
DO23541
65 years, male, NA, stage:2, alive, 930 days
46.1
DO50807
67 years, male, NA, stage:1, alive, 540 days
45.2
DO50803
62 years, female, NA, stage:1, alive, 540 days
45.0
DO45279
67 years, male, NA, stage:3, alive, 1290 days
44.4
DO45094
76 years, male, NA, stage:3, alive, 1650 days
42.6
DO23542
66 years, male, NA, stage:3, alive, 960 days
40.2
DO48727
81 years, female, NA, stage:2, dead, 390 days
40.1
DO50793
76 years, male, NA, stage:4, alive, 540 days
39.9
DO23538
67 years, male, NA, stage:2, alive, 450 days
38.4
DO23531
78 years, female, NA, stage:3, alive, 900 days
37.6
DO48733
72 years, male, NA, stage:2, alive, 600 days
36.2
DO23551
73 years, male, NA, stage:3, dead, 150 days
29.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
473
Tumor
1.1
435
Tumor
1.1
967
Tumor
1.0
227
Tumor
1.0
745
Tumor
0.8
517
Tumor
0.7
465
Tumor
0.7
981
Tumor
0.7
443
Tumor
0.7
925
Tumor
0.7
571
Tumor
0.6
671
Tumor
0.6
171
Tumor
0.6
877
Tumor
0.6
1045
Tumor
0.6
1043
Tumor
0.5
965
Tumor
0.5
1041
Tumor
0.5
911
Tumor
0.5
385
Tumor
0.5
363
Tumor
0.5
411
Tumor
0.5
285
Tumor
0.5
463
Tumor
0.4
627
Tumor
0.4
1025
Tumor
0.4
487
Tumor
0.4
695
Tumor
0.4
1013
Tumor
0.4
483
Tumor
0.4
861
Tumor
0.4
957
Tumor
0.3
341
Tumor
0.3
912
Normal
0.3
477
Tumor
0.3
873
Tumor
0.3
431
Tumor
0.3
127
Tumor
0.3
755
Tumor
0.3
563
Tumor
0.3
921
Tumor
0.3
567
Tumor
0.3
271
Tumor
0.3
975
Tumor
0.3
1015
Tumor
0.3
537
Tumor
0.3
221
Tumor
0.3
393
Tumor
0.3
515
Tumor
0.3
883
Tumor
0.2
423
Tumor
0.2
915
Tumor
0.2
1031
Tumor
0.2
557
Tumor
0.2
112
Tumor
0.2
743
Tumor
0.2
647
Tumor
0.2
615
Tumor
0.2
867
Tumor
0.2
785
Tumor
0.2
741
Tumor
0.2
635
Tumor
0.2
815
Tumor
0.2
937
Tumor
0.2
862
Normal
0.2
123
Tumor
0.1
328
Normal
0.1
1027
Tumor
0.1
727
Tumor
0.1
471
Tumor
0.1
865
Tumor
0.1
573
Tumor
0.1
452
Normal
0.1
864
Normal
0.1
257
Tumor
0.1
513
Tumor
0.1
1021
Tumor
0.1
983
Tumor
0.1
387
Tumor
0.1
874
Normal
0.1
392
Normal
0.1
356
Normal
0.1
558
Normal
0.1
564
Normal
0.1
715
Tumor
0.1
445
Tumor
0.1
277
Tumor
0.1
963
Tumor
0.0
746
Normal
0.0
217
Tumor
0.0
1026
Normal
0.0
412
Normal
0.0
466
Normal
0.0
817
Tumor
0.0
866
Normal
0.0
391
Tumor
0.0
364
Normal
0.0
388
Normal
0.0
882
Normal
0.0
526
Normal
0.0
728
Normal
0.0
464
Normal
0.0
1042
Normal
0.0
481
Tumor
0.0
572
Normal
0.0
231
Tumor
0.0
461
Tumor
0.0
433
Tumor
0.0
286
Normal
0.0
546
Normal
0.0
145
Tumor
0.0
224
Normal
0.0
665
Tumor
0.0
278
Normal
0.0
968
Normal
0.0
964
Normal
0.0
568
Normal
0.0
851
Tumor
0.0
361
Tumor
0.0
738
Normal
0.0
261
Tumor
0.0
1032
Normal
0.0
1016
Normal
0.0
823
Tumor
0.0
147
Tumor
-0.1
436
Normal
-0.1
525
Tumor
-0.1
742
Normal
-0.1
367
Tumor
-0.1
744
Normal
-0.1
135
Tumor
-0.1
713
Tumor
-0.1
351
Tumor
-0.1
863
Tumor
-0.1
534
Normal
-0.1
491
Tumor
-0.1
982
Normal
-0.1
425
Tumor
-0.1
228
Normal
-0.1
185
Tumor
-0.1
976
Normal
-0.1
878
Normal
-0.1
448
Normal
-0.1
816
Normal
-0.1
416
Normal
-0.1
737
Tumor
-0.1
1028
Normal
-0.1
415
Tumor
-0.1
128
Normal
-0.1
394
Normal
-0.1
913
Tumor
-0.1
574
Normal
-0.1
778
Normal
-0.1
421
Tumor
-0.1
881
Tumor
-0.1
223
Tumor
-0.1
914
Normal
-0.1
161
Tumor
-0.1
267
Tumor
-0.1
365
Tumor
-0.1
488
Normal
-0.1
472
Normal
-0.1
1022
Normal
-0.1
857
Tumor
-0.1
535
Tumor
-0.1
966
Normal
-0.1
518
Normal
-0.2
327
Tumor
-0.2
142
Normal
-0.2
284
Normal
-0.2
958
Normal
-0.2
462
Normal
-0.2
162
Normal
-0.2
214
Normal
-0.2
723
Tumor
-0.2
977
Tumor
-0.2
342
Normal
-0.2
186
Normal
-0.2
852
Normal
-0.2
232
Normal
-0.2
538
Normal
-0.2
172
Normal
-0.2
554
Normal
-0.2
698
Normal
-0.2
358
Normal
-0.2
924
Normal
-0.2
716
Normal
-0.2
686
Normal
-0.2
298
Normal
-0.2
884
Normal
-0.2
191
Tumor
-0.2
357
Tumor
-0.2
697
Tumor
-0.2
714
Normal
-0.2
858
Normal
-0.2
1046
Normal
-0.2
824
Normal
-0.2
355
Tumor
-0.2
868
Normal
-0.2
722
Normal
-0.2
474
Normal
-0.2
213
Tumor
-0.2
424
Normal
-0.2
756
Normal
-0.3
468
Normal
-0.3
923
Tumor
-0.3
696
Normal
-0.3
196
Normal
-0.3
685
Tumor
-0.3
516
Normal
-0.3
818
Normal
-0.3
938
Normal
-0.3
478
Normal
-0.3
455
Tumor
-0.3
354
Normal
-0.3
955
Tumor
-0.3
212
Normal
-0.3
482
Normal
-0.3
786
Normal
-0.3
952
Normal
-0.3
524
Normal
-0.3
956
Normal
-0.3
146
Normal
-0.3
428
Normal
-0.3
922
Normal
-0.3
666
Normal
-0.3
396
Normal
-0.3
414
Normal
-0.3
314
Normal
-0.3
141
Tumor
-0.3
494
Normal
-0.3
137
Tumor
-0.3
641
Tumor
-0.3
432
Normal
-0.3
258
Normal
-0.3
344
Normal
-0.3
484
Normal
-0.3
297
Tumor
-0.3
352
Normal
-0.3
268
Normal
-0.3
111
Normal
-0.3
422
Normal
-0.4
272
Normal
-0.4
353
Tumor
-0.4
1014
Normal
-0.4
222
Normal
-0.4
553
Tumor
-0.4
456
Normal
-0.4
528
Normal
-0.4
954
Normal
-0.4
984
Normal
-0.4
131
Tumor
-0.4
138
Normal
-0.4
444
Normal
-0.4
132
Normal
-0.4
533
Tumor
-0.4
312
Normal
-0.4
724
Normal
-0.4
262
Normal
-0.4
332
Normal
-0.4
814
Normal
-0.4
721
Tumor
-0.4
944
Normal
-0.4
148
Normal
-0.4
218
Normal
-0.4
362
Normal
-0.4
386
Normal
-0.4
366
Normal
-0.4
514
Normal
-0.4
813
Tumor
-0.4
331
Tumor
-0.4
951
Tumor
-0.4
446
Normal
-0.4
124
Normal
-0.4
523
Tumor
-0.4
313
Tumor
-0.4
368
Normal
-0.4
664
Normal
-0.5
426
Normal
-0.5
283
Tumor
-0.5
777
Tumor
-0.5
114
Normal
-0.5
918
Normal
-0.5
916
Normal
-0.5
136
Normal
-0.5
434
Normal
-0.5
536
Normal
-0.5
451
Tumor
-0.5
395
Tumor
-0.5
413
Tumor
-0.5
188
Normal
-0.5
125
Tumor
-0.5
427
Tumor
-0.5
376
Normal
-0.5
492
Normal
-0.5
497
Tumor
-0.5
648
Normal
-0.5
1044
Normal
-0.5
187
Tumor
-0.6
195
Tumor
-0.6
384
Normal
-0.6
447
Tumor
-0.6
498
Normal
-0.6
493
Tumor
-0.6
375
Tumor
-0.6
661
Tumor
-0.6
527
Tumor
-0.6
672
Normal
-0.6
662
Normal
-0.6
663
Tumor
-0.6
953
Tumor
-0.6
113
Tumor
-0.7
943
Tumor
-0.7
636
Normal
-0.7
926
Normal
-0.7
618
Normal
-0.7
545
Tumor
-0.7
192
Normal
-0.7
467
Tumor
-0.7
126
Normal
-0.7
917
Tumor
-0.8
978
Normal
-0.8
383
Tumor
-0.8
211
Tumor
-0.9
642
Normal
-0.9
617
Tumor
-0.9
628
Normal
-0.9
616
Normal
-1.0
343
Tumor
-1.0
311
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
