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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNLRB1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
165.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
685.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
553.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
506.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
476.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
441.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
419.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
400.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
396.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
392.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
385.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
357.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
356.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
348.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
330.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
326.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
324.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
318.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
313.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
313.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
311.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
302.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
301.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
299.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
299.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
298.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
296.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
294.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
293.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
293.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
290.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
288.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
286.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
286.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
278.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
271.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
268.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
267.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
267.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
264.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
263.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
260.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
256.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
255.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
254.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
253.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
251.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
250.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
249.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
249.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
248.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
245.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
242.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
239.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
239.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
237.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
236.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
233.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
230.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
229.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
228.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
224.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
223.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
222.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
222.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
221.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
220.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
217.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
216.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
215.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
213.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
210.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
209.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
208.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
208.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
205.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
204.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
202.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
201.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
201.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
201.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
200.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
199.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
199.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
199.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
199.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
199.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
199.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
198.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
198.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
197.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
196.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
196.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
195.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
192.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
191.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
191.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
191.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
191.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
189.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
188.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
188.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
187.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
186.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
186.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
183.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
183.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
182.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
181.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
180.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
179.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
179.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
178.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
176.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
174.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
173.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
172.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
172.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
172.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
172.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
171.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
171.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
170.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
170.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
169.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
168.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
168.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
168.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
167.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
166.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
165.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
164.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
164.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
164.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
164.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
164.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
162.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
162.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
161.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
161.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
161.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
160.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
160.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
159.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
159.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
159.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
158.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
158.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
158.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
155.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
155.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
154.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
154.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
154.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
154.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
153.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
153.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
153.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
152.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
152.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
151.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
151.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
150.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
150.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
149.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
149.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
149.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
149.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
149.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
149.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
148.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
147.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
147.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
147.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
147.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
146.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
146.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
146.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
146.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
145.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
144.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
144.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
144.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
143.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
141.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
141.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
141.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
140.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
139.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
139.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
138.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
138.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
138.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
137.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
137.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
136.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
136.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
136.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
136.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
136.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
135.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
135.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
134.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
133.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
133.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
133.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
133.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
132.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
132.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
132.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
131.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
131.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
131.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
131.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
131.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
130.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
130.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
130.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
130.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
129.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
129.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
128.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
128.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
127.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
127.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
127.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
127.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
126.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
126.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
126.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
126.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
125.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
125.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
125.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
125.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
124.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
124.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
123.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
123.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
123.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
123.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
123.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
122.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
122.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
122.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
122.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
122.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
121.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
121.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
120.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
120.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
120.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
119.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
119.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
119.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
118.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
118.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
118.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
117.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
117.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
117.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
117.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
117.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
116.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
116.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
115.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
115.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
114.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
114.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
114.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
114.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
113.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
113.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
112.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
112.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
111.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
111.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
111.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
111.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
111.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
111.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
110.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
110.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
110.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
109.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
109.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
108.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
108.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
107.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
107.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
107.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
107.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
107.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
106.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
105.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
104.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
104.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
103.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
103.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
103.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
102.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
102.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
102.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
101.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
101.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
100.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
100.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
99.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
99.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
98.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
98.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
97.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
97.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
97.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
96.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
95.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
95.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
95.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
95.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
94.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
93.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
93.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
91.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
90.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
90.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
90.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
90.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
89.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
89.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
89.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
88.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
88.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
87.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
87.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
86.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
85.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
85.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
85.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
84.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
83.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
83.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
83.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
82.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
81.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
81.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
78.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
76.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
76.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
76.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
75.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
75.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
73.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
73.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
73.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
73.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
72.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
72.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
70.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
67.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
65.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
65.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
64.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNLRB1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
107.8
Number of samples
231
Samples
Sample
Description
TPM
DO45289
0 years, female, NA, stage:3, alive, 360 days
286.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
284.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
283.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
271.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
258.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
250.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
250.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
248.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
243.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
238.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
230.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
226.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
221.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
212.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
210.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
207.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
205.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
205.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
204.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
203.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
196.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
194.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
193.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
192.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
187.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
186.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
184.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
182.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
181.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
177.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
177.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
172.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
171.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
171.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
169.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
167.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
166.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
166.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
165.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
160.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
155.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
154.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
152.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
152.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
142.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
139.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
137.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
137.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
134.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
133.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
133.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
132.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
130.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
129.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
127.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
127.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
124.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
124.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
122.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
121.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
120.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
120.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
120.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
119.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
118.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
117.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
117.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
116.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
116.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
116.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
113.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
113.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
113.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
113.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
112.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
112.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
112.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
110.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
110.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
110.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
110.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
108.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
107.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
107.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
106.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
106.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
106.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
105.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
104.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
104.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
103.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
103.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
103.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
103.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
102.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
102.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
101.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
100.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
99.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
99.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
98.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
98.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
98.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
97.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
97.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
97.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
97.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
95.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
95.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
94.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
94.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
94.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
94.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
94.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
93.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
93.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
92.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
92.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
92.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
92.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
91.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
91.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
90.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
90.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
89.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
88.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
86.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
86.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
86.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
86.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
86.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
85.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
85.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
85.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
85.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
85.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
84.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
84.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
84.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
84.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
84.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
83.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
83.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
83.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
82.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
82.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
82.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
82.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
81.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
80.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
80.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
80.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
80.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
79.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
79.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
78.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
78.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
77.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
77.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
77.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
76.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
76.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
76.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
75.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
74.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
73.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
73.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
72.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
72.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
72.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
70.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
70.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
70.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
69.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
68.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
68.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
67.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
66.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
66.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
65.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
65.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
65.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
64.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
64.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
64.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
64.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
64.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
64.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
64.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
63.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
63.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
63.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
62.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
62.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
62.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
62.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
62.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
61.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
61.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
60.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
60.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
60.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
59.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
58.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
58.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
58.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
56.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
55.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
55.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
54.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
54.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
54.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
53.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
52.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
52.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
52.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
50.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
50.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
47.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
47.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
46.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
46.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
45.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
43.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
43.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
42.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
40.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
38.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
36.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
35.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
27.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
0.9
1013
Tumor
0.6
135
Tumor
0.6
351
Tumor
0.5
497
Tumor
0.5
953
Tumor
0.5
527
Tumor
0.5
311
Tumor
0.5
567
Tumor
0.4
147
Tumor
0.4
917
Tumor
0.4
283
Tumor
0.4
285
Tumor
0.4
375
Tumor
0.4
813
Tumor
0.4
983
Tumor
0.3
817
Tumor
0.3
125
Tumor
0.3
865
Tumor
0.3
721
Tumor
0.3
851
Tumor
0.3
857
Tumor
0.3
421
Tumor
0.3
881
Tumor
0.3
863
Tumor
0.3
483
Tumor
0.3
713
Tumor
0.3
877
Tumor
0.3
455
Tumor
0.2
537
Tumor
0.2
573
Tumor
0.2
427
Tumor
0.2
981
Tumor
0.2
714
Normal
0.2
498
Normal
0.2
1043
Tumor
0.2
493
Tumor
0.2
978
Normal
0.2
553
Tumor
0.2
873
Tumor
0.2
525
Tumor
0.2
663
Tumor
0.2
925
Tumor
0.2
815
Tumor
0.2
1015
Tumor
0.2
535
Tumor
0.2
1027
Tumor
0.2
131
Tumor
0.2
921
Tumor
0.2
814
Normal
0.2
221
Tumor
0.2
715
Tumor
0.2
277
Tumor
0.2
777
Tumor
0.2
145
Tumor
0.2
1022
Normal
0.2
171
Tumor
0.2
695
Tumor
0.2
137
Tumor
0.2
1014
Normal
0.2
883
Tumor
0.2
861
Tumor
0.2
868
Normal
0.2
724
Normal
0.2
965
Tumor
0.2
257
Tumor
0.2
874
Normal
0.1
227
Tumor
0.1
463
Tumor
0.1
536
Normal
0.1
271
Tumor
0.1
192
Normal
0.1
445
Tumor
0.1
385
Tumor
0.1
211
Tumor
0.1
491
Tumor
0.1
471
Tumor
0.1
671
Tumor
0.1
716
Normal
0.1
647
Tumor
0.1
951
Tumor
0.1
641
Tumor
0.1
967
Tumor
0.1
745
Tumor
0.1
363
Tumor
0.1
984
Normal
0.1
977
Tumor
0.1
1041
Tumor
0.1
533
Tumor
0.1
862
Normal
0.1
356
Normal
0.1
686
Normal
0.1
738
Normal
0.1
913
Tumor
0.1
727
Tumor
0.1
823
Tumor
0.1
923
Tumor
0.1
487
Tumor
0.1
916
Normal
0.1
383
Tumor
0.1
852
Normal
0.1
185
Tumor
0.1
217
Tumor
0.1
744
Normal
0.1
444
Normal
0.1
737
Tumor
0.1
975
Tumor
0.1
411
Tumor
0.1
912
Normal
0.1
127
Tumor
0.1
563
Tumor
0.1
982
Normal
0.1
1045
Tumor
0.1
666
Normal
0.1
697
Tumor
0.1
558
Normal
0.0
492
Normal
0.0
126
Normal
0.0
884
Normal
0.0
741
Tumor
0.0
924
Normal
0.0
696
Normal
0.0
557
Tumor
0.0
286
Normal
0.0
617
Tumor
0.0
128
Normal
0.0
431
Tumor
0.0
728
Normal
0.0
114
Normal
0.0
488
Normal
0.0
462
Normal
0.0
187
Tumor
0.0
1028
Normal
0.0
661
Tumor
0.0
914
Normal
0.0
746
Normal
0.0
742
Normal
0.0
223
Tumor
0.0
1021
Tumor
0.0
785
Tumor
0.0
415
Tumor
0.0
413
Tumor
0.0
698
Normal
0.0
141
Tumor
0.0
665
Tumor
0.0
412
Normal
0.0
743
Tumor
0.0
364
Normal
0.0
353
Tumor
0.0
943
Tumor
0.0
722
Normal
0.0
433
Tumor
0.0
111
Normal
0.0
313
Tumor
0.0
432
Normal
0.0
858
Normal
0.0
723
Tumor
0.0
297
Tumor
0.0
911
Tumor
0.0
425
Tumor
0.0
615
Tumor
0.0
867
Tumor
0.0
648
Normal
0.0
268
Normal
0.0
616
Normal
0.0
672
Normal
0.0
866
Normal
0.0
395
Tumor
0.0
146
Normal
0.0
212
Normal
0.0
416
Normal
0.0
918
Normal
0.0
517
Tumor
0.0
224
Normal
0.0
1044
Normal
0.0
1016
Normal
0.0
1046
Normal
0.0
1032
Normal
0.0
786
Normal
0.0
448
Normal
0.0
1042
Normal
0.0
572
Normal
0.0
352
Normal
0.0
958
Normal
0.0
864
Normal
-0.1
261
Tumor
-0.1
123
Tumor
-0.1
355
Tumor
-0.1
976
Normal
-0.1
365
Tumor
-0.1
968
Normal
-0.1
262
Normal
-0.1
484
Normal
-0.1
213
Tumor
-0.1
937
Tumor
-0.1
447
Tumor
-0.1
824
Normal
-0.1
331
Tumor
-0.1
466
Normal
-0.1
436
Normal
-0.1
952
Normal
-0.1
481
Tumor
-0.1
778
Normal
-0.1
272
Normal
-0.1
472
Normal
-0.1
228
Normal
-0.1
434
Normal
-0.1
332
Normal
-0.1
494
Normal
-0.1
384
Normal
-0.1
124
Normal
-0.1
528
Normal
-0.1
756
Normal
-0.1
284
Normal
-0.1
328
Normal
-0.1
956
Normal
-0.1
568
Normal
-0.1
188
Normal
-0.1
456
Normal
-0.1
467
Tumor
-0.1
461
Tumor
-0.1
423
Tumor
-0.1
367
Tumor
-0.1
343
Tumor
-0.1
142
Normal
-0.1
443
Tumor
-0.1
387
Tumor
-0.1
435
Tumor
-0.1
524
Normal
-0.1
446
Normal
-0.1
414
Normal
-0.1
464
Normal
-0.1
161
Tumor
-0.1
451
Tumor
-0.1
214
Normal
-0.1
513
Tumor
-0.1
628
Normal
-0.1
482
Normal
-0.1
957
Tumor
-0.1
312
Normal
-0.1
523
Tumor
-0.1
882
Normal
-0.2
478
Normal
-0.2
662
Normal
-0.2
1031
Tumor
-0.2
424
Normal
-0.2
816
Normal
-0.2
1026
Normal
-0.2
545
Tumor
-0.2
231
Tumor
-0.2
818
Normal
-0.2
926
Normal
-0.2
391
Tumor
-0.2
938
Normal
-0.2
468
Normal
-0.2
191
Tumor
-0.2
664
Normal
-0.2
944
Normal
-0.2
878
Normal
-0.2
354
Normal
-0.2
138
Normal
-0.2
915
Tumor
-0.2
258
Normal
-0.2
966
Normal
-0.2
963
Tumor
-0.2
218
Normal
-0.2
368
Normal
-0.2
327
Tumor
-0.2
132
Normal
-0.2
546
Normal
-0.2
341
Tumor
-0.2
362
Normal
-0.2
112
Tumor
-0.2
564
Normal
-0.2
574
Normal
-0.2
195
Tumor
-0.2
514
Normal
-0.2
278
Normal
-0.2
755
Tumor
-0.2
954
Normal
-0.2
922
Normal
-0.2
232
Normal
-0.2
148
Normal
-0.2
113
Tumor
-0.2
344
Normal
-0.2
627
Tumor
-0.3
1025
Tumor
-0.3
428
Normal
-0.3
534
Normal
-0.3
452
Normal
-0.3
422
Normal
-0.3
465
Tumor
-0.3
342
Normal
-0.3
388
Normal
-0.3
136
Normal
-0.3
526
Normal
-0.3
392
Normal
-0.3
964
Normal
-0.3
376
Normal
-0.3
366
Normal
-0.3
172
Normal
-0.3
222
Normal
-0.3
474
Normal
-0.3
642
Normal
-0.3
386
Normal
-0.3
361
Tumor
-0.3
618
Normal
-0.3
515
Tumor
-0.3
571
Tumor
-0.3
357
Tumor
-0.3
426
Normal
-0.3
298
Normal
-0.3
538
Normal
-0.3
516
Normal
-0.3
394
Normal
-0.3
518
Normal
-0.3
636
Normal
-0.3
196
Normal
-0.3
396
Normal
-0.3
473
Tumor
-0.3
358
Normal
-0.3
162
Normal
-0.4
314
Normal
-0.4
477
Tumor
-0.4
267
Tumor
-0.4
635
Tumor
-0.4
186
Normal
-0.5
554
Normal
-0.5
955
Tumor
-0.5
393
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.