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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP24 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
97.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
92.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
80.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
74.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
71.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
70.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
65.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
63.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
62.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
59.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
58.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
57.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
53.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
52.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
51.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
51.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
49.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
46.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
44.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
44.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
41.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
40.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
37.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
36.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
34.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
33.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
33.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
32.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
29.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
28.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
28.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
26.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
25.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
25.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
23.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
22.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
1.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP24 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
58.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
51.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
50.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
48.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
43.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
41.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
40.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
36.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
33.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
31.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
29.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
29.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
28.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
27.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
27.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
27.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
25.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
25.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
21.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
18.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
17.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
17.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
9.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
9.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
8.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
8.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
8.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
8.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
7.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
7.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
7.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
7.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
7.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
7.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
7.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
6.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
6.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
6.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
6.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
6.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
6.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
6.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
6.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
6.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
6.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
6.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
5.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
5.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
5.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
5.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
5.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
5.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
5.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
5.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
5.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
5.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
5.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
5.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
4.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
4.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
4.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
4.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
4.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
4.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
4.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
4.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
4.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
4.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
4.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
4.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
4.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
4.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
4.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
4.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
3.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
3.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
3.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
3.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
3.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
3.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
3.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
3.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
3.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
3.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
3.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
3.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
3.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
3.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
3.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
3.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
2.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
2.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
2.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
2.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
2.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
2.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
2.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
2.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
2.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
2.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
2.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
2.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
1.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
1.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
1.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
0.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
0.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP24 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
86.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
63.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
49.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
44.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
42.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
17.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
10.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
9.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
8.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
8.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
7.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
7.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
7.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
7.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
7.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
5.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
5.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
5.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
5.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
4.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
4.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
4.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
4.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
4.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
4.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
4.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
4.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
4.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
3.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
3.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
3.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
3.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
3.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
3.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
3.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
3.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
2.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
2.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
2.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
2.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
2.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
1.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
0.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MMP24 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
154.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
144.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
144.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
101.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
91.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
89.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
87.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
81.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
79.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
78.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
75.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
74.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
62.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
59.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
59.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
58.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
58.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
53.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
51.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
51.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
51.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
50.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
50.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
47.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
44.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
43.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
42.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
42.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
41.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
41.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
41.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
41.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
38.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
36.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
34.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
34.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
33.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
31.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
31.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
31.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
31.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
31.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
31.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
30.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
30.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
30.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
30.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
30.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
29.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
29.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
29.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
28.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
27.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
27.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
27.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
26.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
25.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
23.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
20.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
20.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
19.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
19.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
14.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
14.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
13.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
10.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
8.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
7.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
6.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
6.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
5.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
2.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
1.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
